Works (11)

Updated: April 20th, 2024 05:00

2024 journal article

The Cissus quadrangularis genome reveals its adaptive features in an arid habitat

HORTICULTURE RESEARCH, 11(4).

By: Q. Li*, Y. Wang*, H. Zhou*, Y. Liu*, D. Gichuki*, Y. Hou*, J. Zhang*, R. Aryal n ...

Source: Web Of Science
Added: April 15, 2024

2023 journal article

Genome-wide association identifies key loci controlling blackberry postharvest quality

FRONTIERS IN PLANT SCIENCE, 14.

By: T. Chizk*, J. Clark*, C. Johns*, L. Nelson*, H. Ashrafi n, R. Aryal n, M. Worthington*

author keywords: firmness; red drupelet reversion; GWAS; polygalacaturonase; pectin methylesterase (PME); Rubus; polyploidy
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: July 3, 2023

2022 journal article

A chromosome-length genome assembly and annotation of blackberry (<i>Rubus argutus</i>, cv. “Hillquist”)

G3 Genes|Genomes|Genetics, 11(ue 2).

Ed(s): T. Pyhäjärvi

author keywords: Rubus; blackberry; Rosaceae; Rosoideae; biennial flowering; annual flowering; primocane-fruiting; chromosome-length genome assembly; Hi-C; annotation; repetitive content
MeSH headings : Rubus / genetics; Tetraploidy; Plant Breeding; Chromosome Mapping; Chromosomes, Plant / genetics; Molecular Sequence Annotation
TL;DR: The utility of the ‘Hillquist’ genome has been demonstrated here by the development of the first genotyping-by-sequencing based linkage map of tetraploid blackberry and the identification of several possible candidate genes for primocane-fruiting within the previously mapped locus. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, Crossref, NC State University Libraries, ORCID
Added: December 16, 2022

2022 article

Genotypic by phenotypic interaction affects the heritability and relationship among quantity and quality traits of strawberry (Fragaria x ananassa)

Zareei, E., Karami, F., Aryal, R., & Saed-Moucheshi, A. (2022, February 22). NEW ZEALAND JOURNAL OF CROP AND HORTICULTURAL SCIENCE.

author keywords: Broad sense heritability; genetic diversity; principal component analysis; heatmap; genetic distance; biplot
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
13. Climate Action (Web of Science)
Source: Web Of Science
Added: March 7, 2022

2022 journal article

Nuclear DNA contents and ploidy levels of North American Vaccinium species and interspecific hybrids

SCIENTIA HORTICULTURAE, 297.

By: L. Redpath n, R. Aryal n, N. Lynch n, J. Spencer n, A. Hulse-Kemp n, J. Ballington n, J. Green*, N. Bassil* ...

author keywords: Blueberry; Vaccinium; Flowcytometry; Propidium iodide; K -mer analysis
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: May 16, 2022

2022 journal article

RNA-Seq and Gene Regulatory Network Analyses Uncover Candidate Genes in the Early Defense to Two Hemibiotrophic Colletorichum spp. in Strawberry

FRONTIERS IN GENETICS, 12.

author keywords: Colletotrichum acutatum; Colletotrichum gloeosporioides; Fragaria x ananassa; rate-reducing resistance; gene regulatory network
TL;DR: Comparison transcriptome analyses and Gene regulatory network inference analysis revealed candidate transcription factors (TFs) such as GATA5 and MYB-10, and their downstream targets were upregulated in resistant interactions, which can provide valuable insights into transcriptional changes during resistant and susceptible interactions. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: April 25, 2022

2021 journal article

Detection of Fruit Meals Within Laboratory-Raised and Field-Trapped Adult Drosophila suzukii (Diptera: Drosophilidae) Guts

Frontiers in Ecology and Evolution, 9.

By: L. Kraft n, T. Sit n, L. Diepenbrock*, H. Ashrafi n, R. Aryal n, G. Fernandez n, H. Burrack n

author keywords: spotted wing Drosophila; integrated pest management; invasive species; gut content; small fruit IPM
TL;DR: Molecular methods to study adult D. suzukii gut content suggest that adult flies move between crop and non-crop habitats and may not be highly dependent on fruit food resources. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: September 20, 2021

2021 journal article

Physiological and biochemical responses of strawberry crown and leaf tissues to freezing stress

BMC PLANT BIOLOGY, 21(1).

author keywords: Freezing injury; TBARS; Strawberry; Fv; Fm; Cold acclimation; SOD; Abiotic stress
MeSH headings : Chlorophyll / metabolism; Fragaria / metabolism; Fragaria / physiology; Freezing; Plant Breeding; Plant Leaves / metabolism; Plant Leaves / physiology; Stress, Physiological / physiology
Source: Web Of Science
Added: November 23, 2021

2021 journal article

Reproductive developmental transcriptome analysis of Tripidium ravennae (Poaceae)

BMC GENOMICS, 22(1).

By: N. Maren n, F. Zhao n, R. Aryal n, D. Touchell n, W. Liu n, T. Ranney n, H. Ashrafi n

author keywords: Tripidium ravennae; Transcriptome sequencing; Differential gene expression; Next-generation sequencing; Floral transition; Flowering; Inflorescence development; Reproduction; RNA sequencing; Seed development
MeSH headings : Gene Expression Profiling; Gene Expression Regulation, Plant; Inflorescence; Plant Breeding; Poaceae
TL;DR: This research identified differentially expressed transcripts associated with floral induction, inflorescence development, and seed development in T. ravennae, providing insights into the molecular regulation of reproductive development and providing a foundation for future investigations and analyses. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: July 19, 2021

2020 journal article

A Rosaceae Family-Level Approach To Identify Loci Influencing Soluble Solids Content in Blackberry for DNA-Informed Breeding

G3-GENES GENOMES GENETICS, 10(10), 3729–3740.

By: J. Zurn*, M. Driskill*, S. Jung*, D. Main*, M. Yin*, M. Clark*, L. Cheng*, H. Ashrafi n ...

author keywords: Fruit sweetness; Rubusspp; RosBREED; Marker-assisted breeding; Marker-assisted selection
MeSH headings : DNA; Fragaria / genetics; Fruit; Malus / genetics; Plant Breeding; Rosaceae / genetics; Rubus / genetics
TL;DR: This discovery represents the first environmentally stable sweetness QTL identified in blackberry and can be used to develop breeding tools for other crops that have not yet benefited directly from the genomics revolution. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: November 2, 2020

2018 journal article

Biochemical composition and antioxidant activity affected by spraying potassium sulfate in black grape (Vitis vinifera L. cv. Rasha)

JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, 98(15), 5632–5638.

By: E. Zareei*, T. Javadi* & R. Aryal n

author keywords: TAA; potassium sulfate; phenol; PPO; grape
MeSH headings : Anthocyanins / chemistry; Anthocyanins / metabolism; Antioxidants / chemistry; Antioxidants / metabolism; Fruit / chemistry; Fruit / drug effects; Fruit / metabolism; Iran; Phenols / chemistry; Phenols / metabolism; Plant Extracts / chemistry; Plant Extracts / metabolism; Plant Leaves / chemistry; Plant Leaves / drug effects; Sulfates / pharmacology; Vitis / chemistry; Vitis / drug effects; Vitis / metabolism
TL;DR: It is suggested that K2 SO4 treatment influences biosynthesis of phenolic compounds and antioxidant enzymes, and could improve nutritional and qualitative attributes of grape. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Web Of Science
Added: December 3, 2018

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