Sankalp Arya

Cockx, B. J. R., Foster, T., Clegg, R. J., Alden, K., Arya, S., Stekel, D. J., … Kreft, J.-U. (2024). Is it selfish to be filamentous in biofilms? Individual-based modeling links microbial growth strategies with morphology using the new and modular iDynoMiCS 2.0. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1011303

Todman, H., Arya, S., Baker, M., & Stekel, D. J. (2023). A model of antibiotic resistance genes accumulation through lifetime exposure from food intake and antibiotic treatment. PLOS ONE, 18(8). https://doi.org/10.1371/journal.pone.0289941

Cockx, B. J. R., Foster, T., Clegg, R. J., Alden, K., Arya, S., Stekel, D. J., … Kreft, J.-U. (2023, June 30). Is it selfish to be filamentous in biofilms? Individual-based modeling links microbial growth strategies with morphology using the new and modular iDynoMiCS 2.0. BioRxiv. https://doi.org/10.1101/2023.06.27.546816

Sidhu, J. S., Ajmera, I., Arya, S., & Lynch, J. P. (2023). RootSlice – a novel functional-structural model for root anatomical phenotypes. BioRxiv, 6. https://doi.org/10.1101/2022.06.29.498145

Sidhu, J. S., Ajmera, I., Arya, S., & Lynch, J. P. (2023). RootSlice—A novel functional-structural model for root anatomical phenotypes. Plant Cell and Environment, 46(5), 1671–1690. https://doi.org/10.1111/pce.14552

Arya, S., Williams, A., Reina, S. V., Knapp, C. W., Kreft, J.-U., Hobman, J. L., & Stekel, D. J. (2021). Towards a general model for predicting minimal metal concentrations co-selecting for antibiotic resistance plasmids. Environmental Pollution, 275, 116602. https://doi.org/10.1016/j.envpol.2021.116602

Arya, S., Todman, H., Baker, M., Hooton, S., Millard, A., Kreft, J.-U., … Stekel, D. J. (2020). A generalised model for generalised transduction: the importance of co-evolution and stochasticity in phage mediated antimicrobial resistance transfer. FEMS Microbiology Ecology, 96(7). https://doi.org/10.1093/femsec/fiaa100

Arya, S., Williams, A., Reina, S. V., Knapp, C. W., Kreft, J.-U., Hobman, J. L., & Stekel, D. J. (2020). Towards a general model for predicting minimal metal concentrations co-selecting for antibiotic resistance plasmids. BioRxiv. https://doi.org/10.1101/2020.09.14.295766

Arya, S., Dubey, V., Sen, D., Sharma, A., & Pathania, R. (2019). Computational Prediction of sRNA in Acinetobacter baumannii. In Methods in Molecular Biology (Vol. 1946, pp. 307–320). https://doi.org/10.1007/978-1-4939-9118-1_27

Pal, C., Asiani, K., Arya, S., Rensing, C., Stekel, D. J., Larsson, D. G. J., & Hobman, J. L. (2017). Metal Resistance and Its Association With Antibiotic Resistance. In Microbiology of Metal Ions (Vol. 70, pp. 261–313). https://doi.org/10.1016/bs.ampbs.2017.02.001

Sharma, R., Arya, S., Patil, S. D., Sharma, A., Jain, P. K., Navani, N. K., & Pathania, R. (2014). Identification of Novel Regulatory Small RNAs in Acinetobacter baumannii. PLoS ONE, 9(4), e93833. https://doi.org/10.1371/journal.pone.0093833