Sermsawat Tunlaya-Anukit

Works (5)

Updated: July 5th, 2023 15:43

2021 article

Enzyme Complexes of Ptr4CL and PtrHCT Modulate Co-enzyme A Ligation of Hydroxycinnamic Acids for Monolignol Biosynthesis in Populus trichocarpa

Lin, C.-Y., Sun, Y., Song, J., Chen, H.-C., Shi, R., Yang, C., … Chiang, V. L. (2021, October 6). Frontiers in Plant Science, Vol. 10.

By: C. Lin n, Y. Sun *, J. Song n, H. Chen n, R. Shi n, C. Yang n, J. Liu  n, S. Tunlaya-Anukit n ...

Contributors: C. Lin n, H. Chen n, R. Shi n, C. Yang n, J. Liu  n, S. Tunlaya-Anukit n, Y. Lin n, R. Sederoff n ...

author keywords: protein interaction; monolignol biosynthesis; wood formation; Populus trichocarpa; BiFC; metabolic flux
topics (OpenAlex): Plant Gene Expression Analysis; Lignin and Wood Chemistry; Biofuel production and bioconversion
TL;DR: It is proposed that Ptr4CL/PtrHCT complexes modulate the metabolic flux of CoA ligation for monolignol biosynthesis during wood formation in P. trichocarpa. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: November 8, 2021

2017 article

Reciprocal cross-regulation of VND and SND multigene TF families for wood formation in Populus trichocarpa

Lin, Y.-C. J., Chen, H., Li, Q., Li, W., Wang, J. P., Shi, R., … Chiang, V. L. (2017, October 23). Proceedings of the National Academy of Sciences, Vol. 11, pp. E9722–E9729.

By: Y. Lin  n, H. Chen n, Q. Li *, W. Li n, J. Wang n , R. Shi n, S. Tunlaya-Anukit n, P. Shuai n ...

Contributors: Y. Lin  n, H. Chen n, Q. Li *, W. Li n, J. Wang n , R. Shi n, S. Tunlaya-Anukit n, P. Shuai n ...

author keywords: reciprocal cross-regulation; NAC transcription factors; alternative splicing; wood formation; Populus trichocarpa
MeSH headings : Alternative Splicing; Cell Wall / genetics; Cell Wall / metabolism; Cloning, Molecular; DNA, Plant; Gene Expression Regulation, Plant / genetics; Gene Regulatory Networks; Genes, Plant; Homeostasis; Multigene Family; Nuclear Proteins; Plant Leaves / genetics; Plant Leaves / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Shoots / genetics; Plant Shoots / metabolism; Populus / genetics; Populus / metabolism; Recombinant Proteins / genetics; Transcription Factors / genetics; Transcription Factors / metabolism; Transcriptional Activation / genetics; Transcriptome; Wood / genetics; Wood / growth & development; Xylem / genetics; Xylem / growth & development
topics (OpenAlex): Plant Gene Expression Analysis; Plant biochemistry and biosynthesis; Plant Molecular Biology Research
TL;DR: The results indicate that the splice variants from the PtrVND6 and PtrSND1 family may exert reciprocal cross-regulation for complete transcriptional regulation of these two families in wood formation, suggesting a general mechanism among NAC domain proteins and likely other transcription factors. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 article

Pop’s Pipes: poplar gene expression data analysis pipelines

Li, X., Gunasekara, C., Guo, Y., Zhang, H., Lei, L., Tunlaya-Anukit, S., … Wei, H. (2014, May 13). Tree Genetics & Genomes.

By: X. Li *, C. Gunasekara  n, Y. Guo*, H. Zhang *, L. Lei *, S. Tunlaya-Anukit n, V. Busov *, V. Chiang n, H. Wei *

author keywords: Poplar; Microarray; RNA-seq data; Differentially expressed genes; Pathway enrichment analysis; Gene ontology enrichment analysis; Protein domain enrichment analysis; Pipeline; Gene ontology tree
topics (OpenAlex): Gene expression and cancer classification; Bioinformatics and Genomic Networks; Genomics and Phylogenetic Studies
TL;DR: Pop’s Pipes can be used to identify differentially expressed genes between one or multiple paired tissues, time points, or treatment-vs-control conditions in a single in silico analysis and enables scrutiny to create spatiotemporal models and hypotheses to understand how poplar develops and functions. (via Semantic Scholar)
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Source: Web Of Science
Added: August 6, 2018

2013 article

Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa

Shi, R., Shuford, C. M., Wang, J. P., Sun, Y.-H., Yang, Z., Chen, H.-C., … Chiang, V. L. (2013, June 13). Planta, Vol. 238, pp. 487–497.

By: R. Shi n, C. Shuford n, J. Wang n , Y. Sun n, Z. Yang n, H. Chen n, S. Tunlaya-Anukit n, Q. Li n ...

Contributors: R. Shi n, C. Shuford n, J. Wang n , Y. Sun n, Z. Yang n, H. Chen n, S. Tunlaya-Anukit n, Q. Li n ...

MeSH headings : Gene Expression Regulation, Plant / physiology; Mass Spectrometry; Phenylalanine Ammonia-Lyase / metabolism; Populus / enzymology; Populus / metabolism
topics (OpenAlex): Plant Gene Expression Analysis; Plant biochemistry and biosynthesis; Horticultural and Viticultural Research
TL;DR: A greater functional significance of subgroup A PtrPALs for stem wood formation is indicated, and the role of gene post-transcriptional regulation is highlighted. (via Semantic Scholar)
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UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: NC State University Libraries, ORCID, NC State University Libraries
Added: August 6, 2018

2013 article

SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa

Lin, Y.-C., Li, W., Sun, Y.-H., Kumari, S., Wei, H., Li, Q., … Chiang, V. L. (2013, November 1). The Plant Cell.

By: Y. Lin n, W. Li n, Y. Sun *, S. Kumari *, H. Wei *, Q. Li n, S. Tunlaya-Anukit n, R. Sederoff n, V. Chiang n

MeSH headings : Algorithms; Cell Wall / genetics; Chromatin Immunoprecipitation; Gene Expression Regulation, Plant; Gene Ontology; Gene Regulatory Networks; High-Throughput Nucleotide Sequencing; Models, Genetic; Plant Proteins / genetics; Plant Proteins / metabolism; Plants, Genetically Modified; Polymerase Chain Reaction / methods; Populus / genetics; Populus / metabolism; Protoplasts; Reproducibility of Results; Transcription Factors / genetics; Transcription Factors / metabolism; Transfection; Wood / genetics; Wood / metabolism; Xylem / cytology; Xylem / genetics
topics (OpenAlex): Plant Gene Expression Analysis; Plant Molecular Biology Research; Plant biochemistry and biosynthesis
TL;DR: A genome-wide high-throughput system for the discovery and validation of specific transcription factor (TF)–directed hierarchical gene regulatory networks (hGRNs) in wood formation is developed and may be particularly useful to study hGRNs in complex processes in plant species resistant to stable genetic transformation and where mutants are unavailable. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

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