@article{oloka_pereira_amankwaah_mollinari_pecota_yada_olukolu_zeng_yencho_2021, title={Discovery of a major QTL for root-knot nematode (Meloidogyne incognita) resistance in cultivated sweetpotato (Ipomoea batatas)}, ISBN={1432-2242}, DOI={10.1007/s00122-021-03797-z}, journal={THEORETICAL AND APPLIED GENETICS}, author={Oloka, Bonny Michael and Pereira, Guilherme da Silva and Amankwaah, Victor A. and Mollinari, Marcelo and Pecota, Kenneth V and Yada, Benard and Olukolu, Bode A. and Zeng, Zhao-Bang and Yencho, G. Craig}, year={2021} } @article{pereira_mollinari_qu_thill_zeng_haynes_yencho_2021, title={Quantitative Trait Locus Mapping for Common Scab Resistance in a Tetraploid Potato Full-Sib Population}, DOI={10.1094/PDIS-10-20-2270-RE}, journal={PLANT DISEASE}, author={Pereira, Guilherme da Silva and Mollinari, Marcelo and Qu, Xinshun and Thill, Christian and Zeng, Zhao-Bang and Haynes, Kathleen and Yencho, G. Craig}, year={2021}, month={Oct} } @article{pereira_mollinari_schumann_clough_zeng_yencho_2021, title={The recombination landscape and multiple QTL mapping in a Solanum tuberosum cv. 'Atlantic'-derived F-1 population}, ISBN={1365-2540}, DOI={10.1038/s41437-021-00416-x}, journal={HEREDITY}, author={Pereira, Guilherme da Silva and Mollinari, Marcelo and Schumann, Mitchell J. and Clough, Mark E. and Zeng, Zhao-Bang and Yencho, G. Craig}, year={2021} } @article{zhou_olukolu_gemenet_wu_gruneberg_cao_fei_zeng_george_khan_et al._2020, title={Assembly of whole-chromosome pseudomolecules for polyploid plant genomes using outbred mapping populations}, volume={52}, ISBN={1546-1718}, DOI={10.1038/s41588-020-00717-7}, number={11}, journal={NATURE GENETICS}, author={Zhou, Chenxi and Olukolu, Bode and Gemenet, Dorcus C. and Wu, Shan and Gruneberg, Wolfgang and Cao, Minh Duc and Fei, Zhangjun and Zeng, Zhao-Bang and George, Andrew W. and Khan, Awais and et al.}, year={2020}, month={Nov}, pages={1256-+} } @article{gemenet_lindqvist-kreuze_de boeck_pereira_mollinari_zeng_yencho_campos_2020, title={Sequencing depth and genotype quality: accuracy and breeding operation considerations for genomic selection applications in autopolyploid crops}, ISBN={1432-2242}, DOI={10.1007/s00122-020-03673-2}, journal={THEORETICAL AND APPLIED GENETICS}, author={Gemenet, Dorcus C. and Lindqvist-Kreuze, Hannele and De Boeck, Bert and Pereira, Guilherme de Silva and Mollinari, Marcelo and Zeng, Zhao-Bang and Yencho, G. Craig and Campos, Hugo}, year={2020} } @article{lara_santos_jank_chiari_vilela_amadeu_santos_pereira_zeng_garcia_2019, title={Genomic Selection with Allele Dosage in Panicum maximum Jacq.}, volume={9}, ISBN={2160-1836}, DOI={10.1534/g3.118.200986}, number={8}, journal={G3-GENES GENOMES GENETICS}, author={Lara, Leticia A. de C. and Santos, Mateus F. and Jank, Liana and Chiari, Lucimara and Vilela, Mariane de M. and Amadeu, Rodrigo R. and Santos, Jhonathan P. R. and Pereira, Guilherme da S. and Zeng, Zhao-Bang and Garcia, Antonio Augusto F.}, year={2019}, month={Aug}, pages={2463–2475} } @article{lee_yang_chi_turkson_du_kemkemer_zeng_long_zhuang_2017, title={Genetic architecture of natural variation underlying adult foraging behavior that is essential for survival of Drosophila melanogaster}, volume={9}, DOI={10.1093/gbe/evx089}, number={5}, journal={Genome Biology and Evolution}, author={Lee, Y. C. G. and Yang, Q. and Chi, W. H. and Turkson, S. A. and Du, W. A. and Kemkemer, C. and Zeng, Z. B. and Long, M. Y. and Zhuang, X. X.}, year={2017}, pages={1357–1369} } @article{schumann_zeng_clough_yencho_2017, title={Linkage map construction and QTL analysis for internal heat necrosis in autotetraploid potato}, volume={130}, DOI={10.1007/s00122-017-2941-1}, number={10}, journal={Theoretical and Applied Genetics}, author={Schumann, M. J. and Zeng, Z. B. and Clough, M. E. and Yencho, G. C.}, year={2017}, pages={2045–2056} } @article{xiong_mckeand_isik_wegrzyn_neale_zeng_silva_whetten_2016, title={Quantitative trait loci influencing forking defects in an outbred pedigree of loblolly pine}, volume={17}, DOI={10.1186/s12863-016-0446-6}, journal={BMC Genetics}, author={Xiong, J. S. and McKeand, S. E. and Isik, F. and Wegrzyn, J. and Neale, D. B. and Zeng, Z. B. and Silva, L. D. E. and Whetten, R. W.}, year={2016} } @article{laurie_wang_carlini-garcia_zeng_2014, title={Mapping epistatic quantitative trait loci}, volume={15}, DOI={10.1186/s12863-014-0112-9}, journal={BMC Genetics}, author={Laurie, C. and Wang, S. C. and Carlini-Garcia, L. A. and Zeng, Z. B.}, year={2014} } @article{huang_zhang_zeng_bushel_2013, title={Improved Sparse Multi-Class SVM and Its Application for Gene Selection in Cancer Classification}, volume={12}, ISSN={1176-9351 1176-9351}, url={http://dx.doi.org/10.4137/cin.s10212}, DOI={10.4137/cin.s10212}, journal={Cancer Informatics}, publisher={SAGE Publications}, author={Huang, Lingkang and Zhang, Hao Helen and Zeng, Zhao-Bang and Bushel, Pierre R.}, year={2013}, month={Jan}, pages={CIN.S10212} } @article{kaddurah-daouk_yuan_boyle_matson_wang_zeng_zhu_dougherty_yao_chen_et al._2012, title={Cerebrospinal Fluid Metabolome in Mood Disorders-Remission State has a Unique Metabolic Profile}, volume={2}, ISSN={2045-2322}, url={http://dx.doi.org/10.1038/srep00667}, DOI={10.1038/srep00667}, number={1}, journal={Scientific Reports}, publisher={Springer Science and Business Media LLC}, author={Kaddurah-Daouk, Rima and Yuan, Peixiong and Boyle, Stephen H. and Matson, Wayne and Wang, Zhi and Zeng, Zhao Bang and Zhu, Hongjie and Dougherty, George G. and Yao, Jeffrey K. and Chen, Guang and et al.}, year={2012}, month={Sep} } @inbook{silva_wang_zeng_2012, title={Composite Interval Mapping and Multiple Interval Mapping: Procedures and Guidelines for Using Windows QTL Cartographer}, ISBN={9781617797842 9781617797859}, ISSN={1064-3745 1940-6029}, url={http://dx.doi.org/10.1007/978-1-61779-785-9_6}, DOI={10.1007/978-1-61779-785-9_6}, booktitle={Methods in Molecular Biology}, publisher={Humana Press}, author={Silva, Luciano Da Costa E. and Wang, Shengchu and Zeng, Zhao-Bang}, year={2012}, pages={75–119} } @article{abo_hebbring_ji_zhu_zeng_batzler_jenkins_biernacka_snyder_drews_et al._2012, title={Merging pharmacometabolomics with pharmacogenomics using ‘1000 Genomes’ single-nucleotide polymorphism imputation}, volume={22}, ISSN={1744-6872}, url={http://dx.doi.org/10.1097/FPC.0b013e32835001c9}, DOI={10.1097/fpc.0b013e32835001c9}, number={4}, journal={Pharmacogenetics and Genomics}, publisher={Ovid Technologies (Wolters Kluwer Health)}, author={Abo, Ryan and Hebbring, Scott and Ji, Yuan and Zhu, Hongjie and Zeng, Zhao-Bang and Batzler, Anthony and Jenkins, Gregory D. and Biernacka, Joanna and Snyder, Karen and Drews, Maureen and et al.}, year={2012}, month={Apr}, pages={247–253} } @article{trupp_zhu_wikoff_baillie_zeng_karp_fiehn_krauss_kaddurah-daouk_2012, title={Metabolomics Reveals Amino Acids Contribute to Variation in Response to Simvastatin Treatment}, volume={7}, ISSN={1932-6203}, url={http://dx.doi.org/10.1371/journal.pone.0038386}, DOI={10.1371/journal.pone.0038386}, number={7}, journal={PLoS ONE}, publisher={Public Library of Science (PLoS)}, author={Trupp, Miles and Zhu, Hongjie and Wikoff, William R. and Baillie, Rebecca A. and Zeng, Zhao-Bang and Karp, Peter D. and Fiehn, Oliver and Krauss, Ronald M. and Kaddurah-Daouk, Rima}, editor={Oresic, MatejEditor}, year={2012}, month={Jul}, pages={e38386} } @article{silva_wang_zeng_2012, title={Multiple trait multiple interval mapping of quantitative trait loci from inbred line crosses}, volume={13}, journal={BMC Genetics}, author={Silva, L. D. E. and Wang, S. C. and Zeng, Z. B.}, year={2012} } @article{kaddurah-daouk_baillie_zhu_zeng_wiest_nguyen_wojnoonski_watkins_trupp_krauss_2011, title={Enteric microbiome metabolites correlate with response to simvastatin treatment}, volume={6}, DOI={10.1371/journal.pone.0025482}, number={10}, journal={PLoS One}, author={Kaddurah-Daouk, R. and Baillie, R. A. and Zhu, H. J. and Zeng, Z. B. and Wiest, M. M. and Nguyen, U. T. and Wojnoonski, K. and Watkins, S. M. and Trupp, M. and Krauss, R. M.}, year={2011} } @article{duarte_zeng_2011, title={High-confidence discovery of genetic network regulators in expression quantitative trait loci data}, volume={187}, DOI={10.1534/genetics.110.124685}, number={3}, journal={Genetics}, author={Duarte, C. W. and Zeng, Z. B.}, year={2011}, pages={955–964} } @article{chakraborty_zeng_2011, title={QTL Mapping for Days to Flowering under Drought Condition in Rice (Oryza sativa L.) Genome}, volume={39}, ISSN={1842-4309 0255-965X}, url={http://dx.doi.org/10.15835/nbha3915610}, DOI={10.15835/nbha3915610}, abstractNote={QTL for days to flowering in rice under drought condition were mapped using a DH population derived from a cross between a deep-rooted upland adapted japonica genotype CT9993-5-10-1-M and a lowland adapted shallow-rooted moderately drought tolerant indica genotype IR62266-42-6-2. QTL mapping was performed following three different mapping models viz. simple (SIM), composite (CIM) and multiple mapping model (MIM) using WinQTL Cartographer version 2.5.006. SIM located 12 QTL for days to flowering spread over nine chromosomes whereas CIM and MIM each located 5 QTL with a threshold LOD score of 2.5. A comparison of the QTL detected by three different models identified five QTL that were common across at least two models for days to flowering. In MIM analysis, the detected QTL (qHD-1-b) between flanking markers (RG109 – ME1014) located on chromosome 1 recorded positive effect (1.4090) but the remaining four QTL had negative effect. The QTL (qHD-3-a) detected between flanking markers (RG104 – RG409) by both MIM and SIM in the present study was also reported earlier as linked with the marker RG104. The five common QTL detected by at least two models could be considered as stable QTL for days to flowering under drought and might be of practical use in marker assisted selection.}, number={1}, journal={Notulae Botanicae Horti Agrobotanici Cluj-Napoca}, publisher={AcademicPres (EAP) Publishing House}, author={Chakraborty, Supriyo and Zeng, Zhao Bang}, year={2011}, month={May}, pages={58} } @article{silva_zeng_2010, title={Current progress on statistical methods for mapping quantitative trait loci from inbred line crosses}, volume={20}, DOI={10.1080/10543400903572845}, number={2}, journal={Journal of Biopharmaceutical Statistics}, author={Silva, L. D. E. and Zeng, Z. B.}, year={2010}, pages={454–481} } @article{ji_hebbring_zhu_jenkins_biernacka_snyder_drews_fiehn_zeng_schaid_et al._2010, title={Glycine and a Glycine Dehydrogenase (GLDC) SNP as Citalopram/Escitalopram Response Biomarkers in Depression: Pharmacometabolomics-Informed Pharmacogenomics}, volume={89}, ISSN={0009-9236 1532-6535}, url={http://dx.doi.org/10.1038/clpt.2010.250}, DOI={10.1038/clpt.2010.250}, number={1}, journal={Clinical Pharmacology & Therapeutics}, publisher={Springer Nature}, author={Ji, Y and Hebbring, S and Zhu, H and Jenkins, G D and Biernacka, J and Snyder, K and Drews, M and Fiehn, O and Zeng, Z and Schaid, D and et al.}, year={2010}, month={Nov}, pages={97–104} } @article{kaddurah-daouk_baillie_zhu_zeng_wiest_nguyen_watkins_krauss_2010, title={Lipidomic analysis of variation in response to simvastatin in the Cholesterol and Pharmacogenetics Study}, volume={6}, ISSN={1573-3882 1573-3890}, url={http://dx.doi.org/10.1007/s11306-010-0207-x}, DOI={10.1007/s11306-010-0207-x}, number={2}, journal={Metabolomics}, publisher={Springer Nature}, author={Kaddurah-Daouk, Rima and Baillie, Rebecca A. and Zhu, Hongjie and Zeng, Zhao-Bang and Wiest, Michelle M. and Nguyen, Uyen Thao and Watkins, Steven M. and Krauss, Ronald M.}, year={2010}, month={Apr}, pages={191–201} } @book{e silva_chang_zeng_2010, title={Power, sample size and confidence interval for quantitative trait loci mapping on multiple traits}, author={E Silva, L.D.C. and Chang, S.-M. and Zeng, Z.-B.}, year={2010} } @article{hu_liu_zeng_ding_yin_gong_zhang_2010, title={QTL identification using combined linkage and linkage disequilibrium mapping for milk production traits on BTA6 in Chinese Holstein population}, volume={23}, DOI={10.5713/ajas.2010.10011}, number={10}, journal={Asian-Australasian Journal of Animal Sciences}, author={Hu, F. and Liu, J. F. and Zeng, Z. B. and Ding, X. D. and Yin, C. C. and Gong, Y. Z. and Zhang, Q.}, year={2010}, pages={1261–1267} } @article{wang_jacob_ghosh_wang_zeng_2009, title={A joint association test for multiple SNPs in genetic case-control studies}, volume={33}, DOI={10.1002/gepi.20368}, number={2}, journal={Genetic Epidemiology}, author={Wang, T. and Jacob, H. and Ghosh, S. and Wang, X. J. and Zeng, Z. B.}, year={2009}, pages={151–163} } @article{wang_zeng_2009, title={Contribution of genetic effects to genetic variance components with epistasis and linkage disequilibrium}, volume={10}, DOI={10.1186/1471-2156-10-52}, journal={BMC Genetics}, author={Wang, T. and Zeng, Z. B.}, year={2009} } @article{kim_feng_zeng_2009, title={Measuring and partitioning the high-order linkage disequilibrium by multiple order Markov chains}, volume={33}, ISSN={0741-0395 1098-2272}, url={http://dx.doi.org/10.1002/gepi.20349}, DOI={10.1002/gepi.20349}, number={2}, journal={Genetic Epidemiology}, publisher={Wiley}, author={Kim, Yunjung and Feng, Sheng and Zeng, Zhao-Bang}, year={2009}, month={Feb}, pages={181–181} } @article{kim_feng_zeng_2009, title={Measuring and partitioning the high-order linkage disequilibrium by multiple order Markov chains (vol 32, pg 301, 2008)}, volume={33}, number={2}, journal={Genetic Epidemiology}, author={Kim, Y. J. and Feng, S. and Zeng, Z. B.}, year={2009}, pages={181–181} } @article{zou_zeng_2009, title={Multiple interval mapping for gene expression QTL analysis}, volume={137}, DOI={10.1007/s10709-009-9365-z}, number={2}, journal={Genetica}, author={Zou, W. and Zeng, Z. B.}, year={2009}, pages={125–134} } @article{weir_hill_zhu_zeng_2009, title={The third international conference of quantitative genetics}, volume={136}, DOI={10.1007/s10709-008-9315-1}, number={2}, journal={Genetica}, author={Weir, B. S. and Hill, W. G. and Zhu, J. and Zeng, Z. B.}, year={2009}, pages={211–212} } @article{aylor_zeng_2008, title={From classical genetics to quantitative genetics to systems biology: Modeling epistasis}, volume={4}, number={3}, journal={PLoS Genetics}, author={Aylor, D. L. and Zeng, Z. B.}, year={2008} } @article{huang_heinloth_zeng_paules_bushel_2008, title={Genes related to apoptosis predict necrosis of the liver as a phenotype observed in rats exposed to a compendium of hepatotoxicants}, volume={9}, journal={BMC Genomics}, author={Huang, L. and Heinloth, A. N. and Zeng, Z. B. and Paules, R. S. and Bushel, P. R.}, year={2008} } @article{kim_feng_zeng_2008, title={Measuring and partitioning the high-order linkage disequilibrium by multiple order Markov chains}, volume={32}, DOI={10.1002/gepi.20305}, number={4}, journal={Genetic Epidemiology}, author={Kim, Y. and Feng, S. and Zeng, Z. B.}, year={2008}, pages={301–312} } @article{garcia_wang_melchinger_zeng_2008, title={Quantitative trait loci mapping and the genetic basis of heterosis in maize and rice}, volume={180}, DOI={10.1534/genetics.107.082867}, number={3}, journal={Genetics}, author={Garcia, A. A. F. and Wang, S. C. and Melchinger, A. E. and Zeng, Z. B.}, year={2008}, pages={1707–1724} } @article{zou_zeng_2008, title={Statistical Methods for Mapping Multiple QTL}, volume={2008}, ISSN={1687-5370 1687-5389}, url={http://dx.doi.org/10.1155/2008/286561}, DOI={10.1155/2008/286561}, abstractNote={Since Lander and Botstein proposed the interval mapping method for QTL mapping data analysis in 1989, tremendous progress has been made in the last many years to advance new and powerful statistical methods for QTL analysis. Recent research progress has been focused on statistical methods and issues for mapping multiple QTL together. In this article, we review this progress. We focus the discussion on the statistical methods for mapping multiple QTL by maximum likelihood and Bayesian methods and also on determining appropriate thresholds for the analysis.}, journal={International Journal of Plant Genomics}, publisher={Hindawi Limited}, author={Zou, Wei and Zeng, Zhao-Bang}, year={2008}, pages={1–8} } @article{yang_gao_wang_zhang_zeng_wu_2007, title={A semiparametric approach for composite functional mapping of dynamic quantitative traits}, volume={177}, DOI={10.1534/genetics.107.077321}, number={3}, journal={Genetics}, author={Yang, R. Q. and Gao, H. J. and Wang, X. and Zhang, J. and Zeng, Z. B. and Wu, R. L.}, year={2007}, pages={1859–1870} } @article{lai_leips_zou_roberts_wollenberg_parnell_zeng_ordovas_mackay_2007, title={Speed-mapping quantitative trait loci using microarrays}, volume={4}, DOI={10.1038/NMETH1084}, number={10}, journal={Nature Methods}, author={Lai, C. Q. and Leips, J. and Zou, W. and Roberts, J. F. and Wollenberg, K. R. and Parnell, L. D. and Zeng, Z. B. and Ordovas, J. M. and Mackay, T. F. C.}, year={2007}, pages={839–841} } @article{zeng_2007, title={The Hill–Robertson effect is a consequence of interplay between linkage, selection and drift: a commentary on ‘The effect of linkage on limits to artificial selection’ by W. G. Hill and A. Robertson}, volume={89}, ISSN={0016-6723 1469-5073}, url={http://dx.doi.org/10.1017/s0016672308009506}, DOI={10.1017/s0016672308009506}, number={5-6}, journal={Genetics Research}, publisher={Cambridge University Press (CUP)}, author={Zeng, Zhao Bang}, year={2007}, month={Dec}, pages={309–310} } @article{melchinger_utz_piepho_zeng_schon_2007, title={The role of epistasis in the manifestation of heterosis: A systems-oriented approach}, volume={177}, DOI={10.1534/genetics.107.077537}, number={3}, journal={Genetics}, author={Melchinger, A. E. and Utz, H. F. and Piepho, H. P. and Zeng, Z. B. and Schon, C. C.}, year={2007}, pages={1815–1825} } @article{zou_aylor_zeng_2007, title={eQTL Viewer: visualizing how sequence variation affects genome-wide transcription}, volume={8}, number={7}, journal={BMC Bioinformatics}, author={Zou, W. and Aylor, D. L. and Zeng, Z. B.}, year={2007} } @article{wang_weir_zeng_2006, title={A population-based latent variable approach for association mapping of quantitative trait loci}, volume={70}, DOI={10.1111/j.1469-1809.2006.00264.x}, journal={Annals of Human Genetics}, author={Wang, T. and Weir, B. and Zeng, Z. B.}, year={2006}, pages={506–523} } @article{wang_zeng_2006, title={Models and partition of variance for quantitative trait loci with epistasis and linkage disequilibrium}, volume={7}, journal={BMC Genetics}, author={Wang, T. and Zeng, Z. B.}, year={2006} } @article{li_wang_zeng_2006, title={Multiple-interval mapping for ordinal traits}, volume={173}, DOI={10.1534/genetics.105.054619}, number={3}, journal={Genetics}, author={Li, J. and Wang, S. C. and Zeng, Z. B.}, year={2006}, pages={1649–1663} } @article{chen_griffey_maroof_stromberg_biyashev_zhao_chappell_pridgen_dong_zeng_2006, title={Validation of two major quantitative trait loci for fusarium head blight resistance in Chinese wheat line W14}, volume={125}, DOI={10.1111/j.1439-0523.2006.01182.x}, number={1}, journal={Plant Breeding}, author={Chen, J. and Griffey, C. A. and Maroof, M. A. S. and Stromberg, E. L. and Biyashev, R. M. and Zhao, W. and Chappell, M. R. and Pridgen, T. H. and Dong, Y. and Zeng, Z.}, year={2006}, pages={99–101} } @article{kirst_basten_myburg_zeng_sederoff_2005, title={Genetic architecture of transcript-level variation in differentiating xylem of a eucalyptus hybrid}, volume={169}, DOI={10.1534/genetics.104.039198}, number={4}, journal={Genetics}, author={Kirst, M. and Basten, C. J. and Myburg, A. A. and Zeng, Z. B. and Sederoff, R. R.}, year={2005}, pages={2295–2303} } @article{liu_zeng_2005, title={Mixture model equations for marker-assisted genetic evaluation}, volume={122}, DOI={10.1111/j.1439-0388.2005.00525.x}, number={4}, journal={Journal of Animal Breeding and Genetics}, author={Liu, Y. and Zeng, Z. B.}, year={2005}, pages={229–239} } @article{zeng_wang_zou_2005, title={Modeling quantitative trait loci and interpretation of models}, volume={169}, DOI={10.1534/genetics.104.035857}, number={3}, journal={Genetics}, author={Zeng, Z. B. and Wang, T. and Zou, W.}, year={2005}, pages={1711–1725} } @article{zeng_2005, title={QTL mapping and the genetic basis of adaptation: recent developments}, volume={123}, DOI={10.1007/s10709-004-2705-0}, number={02-Jan}, journal={Genetica}, author={Zeng, Z. B.}, year={2005}, pages={25–37} } @article{tao_zeng_li_hartl_laurie_2003, title={Genetic dissection of hybrid Incompatibilities between Drosophila simulansand D. mauritiana. II. Mapping hybrid male sterility loci on the third chromosome}, volume={164}, number={4}, journal={Genetics}, author={Tao, Y. and Zeng, Z. B. and Li, J. and Hartl, D. L. and Laurie, C. C.}, year={2003}, pages={1399–1418} } @inbook{zeng_2003, place={New York}, title={Quantitative Trait Loci Mapping}, ISBN={9780333803868}, booktitle={Nature encyclopedia of the human genome}, publisher={Nature Publishing Group}, author={Zeng, Z.-B.}, editor={Cooper, DavidEditor}, year={2003} } @article{balding_carothers_marchini_cardon_vetta_griffiths_weir_hill_goldstein_strimmer_et al._2002, title={Discussion on the meeting on 'Statistical modelling and analysis of genetic data'}, volume={64}, ISSN={1369-7412 1467-9868}, url={http://dx.doi.org/10.1111/1467-9868.00359}, DOI={10.1111/1467-9868.00359}, number={4}, journal={Journal of the Royal Statistical Society: Series B (Statistical Methodology)}, publisher={Wiley}, author={Balding, D.J. and Carothers, A.D. and Marchini, J.L. and Cardon, L.R. and Vetta, A. and Griffiths, B. and Weir, B.S. and Hill, W.G. and Goldstein, D. and Strimmer, K. and et al.}, year={2002}, month={Oct}, pages={737–775} } @article{wu_ma_wu_zeng_2002, title={Linkage mapping of sex-specific differences}, volume={79}, DOI={10.1017/s0016672301005389}, number={1}, journal={Genetical Research}, author={Wu, R. L. and Ma, C. X. and Wu, S. S. and Zeng, Z. B.}, year={2002}, pages={85–96} } @article{kao_zeng_2002, title={Modeling epistasis of quantitative trait loci using Cockerham's model}, volume={160}, number={3}, journal={Genetics}, author={Kao, C. H. and Zeng, Z. B.}, year={2002}, pages={1243–1261} } @article{wu_ma_painter_zeng_2002, title={Simultaneous maximum likelihood estimation of linkage and linkage phases in outcrossing species}, volume={61}, DOI={10.1006/tpbi.2002.1577}, number={3}, journal={Theoretical Population Biology}, author={Wu, R. L. and Ma, C. X. and Painter, I. and Zeng, Z. B.}, year={2002}, pages={349–363} } @article{wu_gallo-meagher_littell_zeng_2001, title={A general polyploid model for analyzing gene segregation in outcrossing tetraploid species}, volume={159}, number={2}, journal={Genetics}, author={Wu, R. L. and Gallo-Meagher, M. and Littell, R. C. and Zeng, Z. B.}, year={2001}, pages={869–882} } @article{wu_wu_ma_zeng_yang_casella_2001, title={A multivalent pairing model of linkage analysis in autotetraploids}, volume={159}, number={3}, journal={Genetics}, author={Wu, S. S. and Wu, R. L. and Ma, C. X. and Zeng, Z. B. and Yang, M. C. and Casella, G.}, year={2001}, pages={1339–1350} } @article{weber_eisman_higgins_morey_patty_tausek_zeng_2001, title={An analysis of polygenes affecting wing shape on chromosome 2 in Drosophila melanogaster}, volume={159}, number={3}, journal={Genetics}, author={Weber, K. and Eisman, R. and Higgins, S. and Morey, L. and Patty, A. and Tausek, M. and Zeng, Z. B.}, year={2001}, pages={1045–1057} } @article{wu_zeng_2001, title={Joint linkage and linkage disequilibrium mapping in natural populations}, volume={157}, number={2}, journal={Genetics}, author={Wu, R. L. and Zeng, Z. B.}, year={2001}, pages={899–909} } @article{yin_huang_wang_zhu_zeng_wu_2001, title={Preliminary interspecific genetic maps of the Populus genome constructed from RAPD markers}, volume={44}, DOI={10.1139/gen-44-4-602}, number={4}, journal={Genome}, author={Yin, T. M. and Huang, M. R. and Wang, M. X. and Zhu, L. H. and Zeng, Z. B. and Wu, R. L.}, year={2001}, pages={602–609} } @inbook{zeng_2001, title={QTL Mapping}, ISBN={9780122270802}, url={http://dx.doi.org/10.1006/rwgn.2001.1441}, DOI={10.1006/rwgn.2001.1441}, booktitle={Encyclopedia of Genetics}, publisher={Elsevier}, author={Zeng, Z.-B.}, year={2001}, pages={1587–1593} } @inbook{zeng_2001, place={London, UK}, title={Quantitative trait loci: statistical methods for mapping their positions}, ISBN={9781884964343}, booktitle={Encyclopedia of Genetics}, publisher={Fitzroy Dearborn Publishers}, author={Zeng, Z.-B.}, editor={Reeve, Eric C.R. and Black, IsobelEditors}, year={2001} } @article{liu_zeng_2000, title={A general mixture model approach for mapping quantitative trait loci from diverse cross designs involving multiple inbred lines}, volume={75}, DOI={10.1017/S0016672300004493}, number={3}, journal={Genetical Research}, author={Liu, Y. F. and Zeng, Z. B.}, year={2000}, pages={345–355} } @article{wu_han_hu_fang_li_li_zeng_2000, title={An integrated genetic map of Populus deltoides based on amplified fragment length polymorphisms}, volume={100}, DOI={10.1007/s001220051431}, number={8}, journal={Theoretical and Applied Genetics}, author={Wu, R. L. and Han, Y. F. and Hu, J. J. and Fang, J. J. and Li, L. and Li, M. L. and Zeng, Z. B.}, year={2000}, pages={1249–1256} } @article{zeng_liu_stam_kao_mercer_laurie_2000, title={Genetic architecture of a morphological shape difference between two Drosophila species}, volume={154}, number={1}, journal={Genetics}, author={Zeng, Z. B. and Liu, J. J. and Stam, L. F. and Kao, C. H. and Mercer, J. M. and Laurie, C. C.}, year={2000}, pages={299–310} } @article{vieira_pasyukova_zeng_hackett_lyman_mackay_2000, title={Genotype-environment interaction for quantitative trait loci affecting life span in Drosophila melanogaster}, volume={154}, number={1}, journal={Genetics}, author={Vieira, C. and Pasyukova, E. G. and Zeng, Z. B. and Hackett, J. B. and Lyman, R. F. and Mackay, T. F. C.}, year={2000}, pages={213–227} } @article{luo_tao_zeng_2000, title={Inferring linkage disequilibrium between a polymorphic marker locus and a trait locus in natural populations}, volume={156}, number={1}, journal={Genetics}, author={Luo, Z. W. and Tao, S. H. and Zeng, Z. B.}, year={2000}, pages={457–467} } @inbook{wu_li_zeng_2000, title={Molecular dissection of quantitative traits: new perspectives from populus}, volume={1}, booktitle={Molecular biology of woody plants}, publisher={Dordrecht; Boston: Kluwer Academic}, author={Wu, R. and Li, B. and Zeng, Z.-B.}, editor={Jain, S. M. and Minocha, S. C.Editors}, year={2000}, pages={475–490} } @article{rongling_zeng_mckeand_o'malley_2000, title={The case for molecular mapping in forest tree breeding}, volume={19}, number={2000}, journal={Plant Breeding Reviews}, author={Rongling, W. and Zeng, Z.-B. and McKeand and O'Malley, D. M.}, year={2000}, pages={41–68} } @article{weber_eisman_morey_patty_sparks_tausek_zeng_1999, title={An analysis of polygenes affecting wing shape on chromosome 3 in Drosophila melanogaster}, volume={153}, number={2}, journal={Genetics}, author={Weber, K. and Eisman, R. and Morey, L. and Patty, A. and Sparks, J. and Tausek, M. and Zeng, Z. B.}, year={1999}, pages={773–786} } @article{zeng_kao_basten_1999, title={Estimating the genetic architecture of quantitative traits}, volume={74}, DOI={10.1017/S0016672399004255}, number={3}, journal={Genetical Research}, author={Zeng, Z. B. and Kao, C. H. and Basten, C. J.}, year={1999}, pages={279–289} } @article{kao_zeng_teasdale_1999, title={Multiple interval mapping for quantitative trait loci}, volume={152}, number={3}, journal={Genetics}, author={Kao, C. H. and Zeng, Z. B. and Teasdale, R. D.}, year={1999}, pages={1203–1216} } @article{zeng_1997, title={Combining information from data in mapping analysis: use of multiple markers and multiple traits}, volume={8}, DOI={10.1080/10495399709525876}, number={1}, journal={Animal Biotechnology}, author={Zeng, Z. B.}, year={1997}, pages={145–150} } @article{kao_zeng_1997, title={General formulas for obtaining the MLES and the asymptotic variance-covariance matrix in mapping quantitative trait loci when using the Em algorithm}, volume={53}, DOI={10.2307/2533965}, number={2}, journal={Biometrics}, author={Kao, C.-H. and Zeng, Z.-B.}, year={1997}, pages={653–665} } @article{jiang c. j._zeng_1997, title={Mapping quantitative trait loci with dominant and missing markers in various crosses from two inbred lines}, volume={101}, DOI={10.1023/A:1018394410659}, number={1}, journal={Genetica}, author={Jiang C. J. and Zeng, Z. B.}, year={1997}, pages={47–58} } @book{basten_weir_zeng_1997, title={QTL Cartographer: a reference manual and tutorial for QTL mapping}, publisher={Department of Statistics, NC State University}, author={Basten, C.J. and Weir, B.S. and Zeng, Z.-B.}, year={1997} } @article{true_liu_stam_zeng_laurie_1997, title={Quantitative genetic analysis of divergence in male secondary sexual traits between Drosophila simulans and Drosophila mauritiana}, volume={51}, DOI={10.2307/2411157}, number={3}, journal={Evolution}, author={True, J. R. and Liu, J. J. and Stam, L. F. and Zeng, Z.-B. and Laurie, C. C.}, year={1997}, pages={816–832} } @article{nuzhdin_pasyukova_dilda_zeng_mackay_1997, title={Sex-specific quantitative trait loci affecting longevity in Drosophila melanogaster}, volume={94}, DOI={10.1073/pnas.94.18.9734}, number={18}, journal={Proceedings of the National Academy of Sciences of the United States of America}, author={Nuzhdin, S. V. and Pasyukova, E. G. and Dilda, C. L. and Zeng, Z.-B. and Mackay, T. F. C.}, year={1997}, pages={9734–9739} } @article{doerge_zeng_weir_1997, title={Statistical issues in the search for genes?}, volume={12}, number={1997}, journal={Statistical Science}, author={Doerge, R. W. and Zeng, Z. B. and Weir, B. S.}, year={1997}, pages={195–219} } @article{cockerham_zeng_1996, title={Design III with marker loci}, volume={143}, DOI={10.1093/genetics/143.3.1437}, number={3}, journal={Genetics}, author={Cockerham, C.C. and Zeng, Z.-B.}, year={1996}, month={Jul}, pages={1437–1456} } @article{liu_mercer_stam_gibson_zeng_laurie_1996, title={Genetic analysis of a morphological shape difference in the male genitalia of Drosophila simulans and D. mauritiana}, volume={142}, DOI={10.1093/genetics/142.4.1129}, number={4}, journal={Genetics}, author={Liu, J. and Mercer, J.M. and Stam, L.F. and Gibson, G.C. and Zeng, Z.-B. and Laurie, C.C.}, year={1996}, month={Apr}, pages={1129–1145} } @article{zeng_weir_1996, title={Statistical methods for mapping quantitative trait loci}, volume={22}, journal={Acta Agronomica Sinica}, author={Zeng, Z.-B. and Weir, B.S.}, year={1996}, pages={535–549} } @article{dragani_zeng_canzian_gariboldi_ghilarducci_manenti_pierotti_1995, title={Mapping of body weight loci on mouse Chromosome X}, volume={6}, ISSN={0938-8990 1432-1777}, url={http://dx.doi.org/10.1007/bf00539002}, DOI={10.1007/bf00539002}, number={11}, journal={Mammalian Genome}, publisher={Springer Nature}, author={Dragani, T. A. and Zeng, Z.-B. and Canzian, F. and Gariboldi, M. and Ghilarducci, M. T. and Manenti, G. and Pierotti, M. A.}, year={1995}, month={Nov}, pages={778–781} } @article{jiang_zeng_1995, title={Multiple-trait analysis of genetic-mapping for quantitative trait loci}, volume={140}, number={3}, journal={Genetics}, author={Jiang, C. J. and Zeng, Z. B.}, year={1995}, pages={1111–1127} } @inproceedings{zeng_1994, title={A composite interval mapping method for locating multiple QTLs}, volume={21}, booktitle={Proceedings of the 5th World Congress on Genetics Applied to Livestock Production}, author={Zeng, Z.-B.}, year={1994}, pages={37–40} } @article{zeng_1994, title={Precision mapping of quantitative trait loci}, volume={136}, number={4}, journal={Genetics}, author={Zeng, Z. B.}, year={1994}, pages={1457–1468} } @inproceedings{basten_weir_zeng_1994, title={ZMAP---A QTL Cartographer}, volume={22}, booktitle={Proceedings of the 5th World Congress on Genetics Applied to Livestock Production}, author={Basten, C.J. and Weir, B.S. and Zeng, Z.-B.}, year={1994}, pages={65–66} } @article{zeng_cockerham_1993, title={Mutation models and quantitative genetic variation}, volume={133}, number={3}, journal={Genetics}, author={Zeng, Z. B. and Cockerham, C. C.}, year={1993}, pages={729} } @article{zeng_1993, title={Theoretical basis for separation of multiple linked gene effects in mapping quantitative trait loci}, volume={90}, DOI={10.1073/pnas.90.23.10972}, number={23}, journal={Proceedings of the National Academy of Sciences of the United States of America}, author={Zeng, Z. B.}, year={1993}, pages={10972–10976} } @article{zeng_1992, title={Correcting the bias of Wright's estimates of the number of genes affecting a quantitative character: A further improved method}, volume={131}, number={4}, journal={Genetics}, author={Zeng, Z. B.}, year={1992}, pages={987} } @article{zeng_cockerham_1991, title={Variance of neutral genetic variances within and between populations for a quantitative character}, volume={129}, number={2}, journal={Genetics}, author={Zeng, Z. B. and Cockerham, C. C.}, year={1991}, pages={535} } @inproceedings{zeng_tachida_1990, title={How important is mutation for selection responses?}, volume={13}, booktitle={Proceedings of the 4th World Congress on Genetics Applied to Livestock Production}, author={Zeng, Z.-B. and Tachida, H.}, year={1990}, pages={301–305} } @article{zeng_houle_cockerham_1990, title={How informative is Wright's estimator of the number of genes affecting a quantitative character?}, volume={126}, number={1}, journal={Genetics}, author={Zeng, Z. B. and Houle, D. and Cockerham, C. C.}, year={1990}, pages={235} } @article{zeng_cockerham_1990, title={Long-term response to artificial selection with multiple alleles: Study by simulations}, volume={37}, DOI={10.1016/0040-5809(90)90039-X}, number={1}, journal={Theoretical Population Biology}, author={Zeng, Z. B. and Cockerham, C. C.}, year={1990}, pages={254} } @article{zeng_1989, title={A genetic model of interpopulation variation and covariation of quantitative characters}, volume={53}, DOI={10.1017/S0016672300028196}, number={3}, journal={Genetical Research}, author={Zeng, Z. B.}, year={1989}, pages={215} } @article{zeng_tachida_cockerham_1989, title={Effects of mutation on selection limits in finite populations with multiple alleles}, volume={122}, number={4}, journal={Genetics}, author={Zeng, Z. B. and Tachida, H. and Cockerham, C. C.}, year={1989}, pages={977} } @article{zeng_1988, title={Long-Term Correlated Response, Interpopulation Covariation, and Interspecific Allometry}, volume={42}, ISSN={0014-3820}, url={http://dx.doi.org/10.2307/2409239}, DOI={10.2307/2409239}, number={2}, journal={Evolution}, publisher={JSTOR}, author={Zeng, Zhao-Bang}, year={1988}, month={Mar}, pages={363} } @article{zeng_1987, title={Genotypic distribution at the limits to natural and artificial selection with mutation}, volume={32}, ISSN={0040-5809}, url={http://dx.doi.org/10.1016/0040-5809(87)90042-6}, DOI={10.1016/0040-5809(87)90042-6}, number={1}, journal={Theoretical Population Biology}, publisher={Elsevier BV}, author={Zeng, Zhao-Bang}, year={1987}, month={Aug}, pages={90–113} } @article{zeng_hill_1986, title={The selection limit due to the conflict between truncation and stabilizing selection with mutation}, volume={114}, journal={Genetics}, author={Zeng, Z.-B. and Hill, W.G.}, year={1986}, pages={1313–1328} } @phdthesis{zeng_1986, title={Theoretical studies on genetic limits to natural and artificial selection with mutation}, school={Department of Genetics, The University of Edinburgh}, author={Zeng, Z.-B.}, year={1986} }