Works (34)

Updated: April 11th, 2023 10:13

2022 article

BTS Is a Negative Regulator for the Cellular Energy Level and the Expression of Energy Metabolism-Related Genes Encoded by Two Organellar Genomes in Leaf Tissues

Choi, B., Hyeon, D. Y., Lee, J., Long, T. A., Hwang, D., & Hwang, I. (2022, April 15). MOLECULES AND CELLS, Vol. 4.

By: B. Choi*, D. Hyeon*, J. Lee*, T. Long, D. Hwang* & I. Hwang*

author keywords: Arabidopsis thaliana; BRUTUS; energy metabolism; shoot tissues
Sources: ORCID, Web Of Science
Added: April 20, 2022

2022 article

POPEYE intercellular localization mediates cell-specific iron deficiency responses

Muhammad, D. S., Clark, N. M., Haque, S., Williams, C. M., Sozzani, R., & Long, T. A. (2022, August 3). PLANT PHYSIOLOGY, Vol. 8.

By: D. Muhammad, N. Clark, S. Haque, C. Williams, R. Sozzani & T. Long

Sources: ORCID, Web Of Science
Added: August 13, 2022

2021 journal article

A hybrid model connecting regulatory interactions with stem cell divisions in the root

Quantitative Plant Biology, 2.

By: L. Broeck, R. Spurney, A. Fisher, M. Schwartz, N. Clark, T. Nguyen, I. Madison, M. Gobble, T. Long, R. Sozzani

Source: ORCID
Added: April 13, 2021

2021 journal article

Broadening the impact of plant science through innovative, integrative, and inclusive outreach

PLANT DIRECT, 5(4).

By: J. Friesner*, A. Colon-Carmona*, A. Schnoes*, A. Stepanova, G. Mason*, G. Macintosh*, H. Ullah*, I. Baxter* ...

Sources: ORCID, Web Of Science
Added: February 9, 2022

2021 review

Solving the puzzle of Fe homeostasis by integrating molecular, mathematical, and societal models

[Review of ]. CURRENT OPINION IN PLANT BIOLOGY, 64.

By: C. Hodgens n, B. Akpa & T. Long

author keywords: Iron homeostasis; Simulation-based inference (SBI); Inclusivity
Sources: ORCID, Web Of Science
Added: November 27, 2021

2020 chapter

BioVision Tracker: A semi-automated image analysis software for spatiotemporal gene expression tracking in Arabidopsis thaliana

In Methods in Cell Biology (Vol. 160, pp. 419–436).

By: E. Buckner, I. Madison, C. Melvin, T. Long, R. Sozzani & C. Williams

Sources: ORCID, Web Of Science, Crossref
Added: June 17, 2020

2020 journal article

Computational solutions for modeling and controlling plant response to abiotic stresses: a review with focus on iron deficiency

Current Opinion in Plant Biology, 57, 8–15.

By: H. Tong n, I. Madison n, T. Long & C. Williams n

Source: ORCID
Added: July 1, 2020

2020 journal article

Iron homeostasis and plant immune responses: Recent insights and translational implications

Journal of Biological Chemistry, 295(39), 13444–13457.

By: J. Herlihy*, T. Long & J. McDowell*

author keywords: Arabidopsis thaliana; host-pathogen interaction; iron metabolism; metal homeostasis; oxygen radicals; plant defense; plant hormone
Source: ORCID
Added: July 31, 2020

2020 chapter

MAGIC: Live imaging of cellular division in plant seedlings using lightsheet microscopy

In Methods in Cell Biology (Vol. 160, pp. 405–418).

By: I. Madison, C. Melvin, E. Buckner, C. Williams, R. Sozzani & T. Long

Sources: ORCID, Web Of Science, Crossref
Added: June 17, 2020

2019 journal article

Automated Imaging, Tracking, and Analytics Pipeline for Differentiating Environmental Effects on Root Meristematic Cell Division

Frontiers in Plant Science, 10.

By: E. Buckner n, I. Madison n, H. Chou n, A. Matthiadis n, C. Melvin n, R. Sozzani, C. Williams n, T. Long

author keywords: light sheet imaging; image analysis; cell cycle progression; heat stress and iron deficiency stresses; combined stresses
Sources: ORCID, Crossref
Added: December 4, 2019

2019 journal article

Dynamic modelling of the iron deficiency modulated transcriptome response in Arabidopsis thaliana roots

In Silico Plants, 1(1).

By: A. Koryachko n, A. Matthiadis n, S. Haque n, D. Muhammad n, J. Ducoste, J. Tuck n, T. Long, C. Williams n

author keywords: Arabidopsis thaliana; modelling; ODE; Gene Regulatory Network; plant stress response
Sources: ORCID, Crossref
Added: December 10, 2019

2019 review

Hemerythrin E3 Ubiquitin Ligases as Negative Regulators of Iron Homeostasis in Plants

[Review of ]. FRONTIERS IN PLANT SCIENCE, 10.

author keywords: micronutrient; iron deficiency; bHLH; FBXL5; zinc finger; sensor
Sources: Web Of Science, ORCID
Added: March 4, 2019

2019 review

Keep talking: crosstalk between iron and sulfur networks fine-tunes growth and development to promote survival under iron limitation

[Review of ]. JOURNAL OF EXPERIMENTAL BOTANY, 70(16), 4197–4210.

By: D. Mendoza-Cózatl*, A. Gokul*, M. Carelse*, T. Jobe*, T. Long, M. Keyster*, S. Kopriva

author keywords: Dynamic cell economy; iron sensing; iron use efficiency; nutrient crosstalk; sulfur homeostasis
Sources: Web Of Science, ORCID
Added: September 30, 2019

2018 journal article

The E3 ligase BRUTUS facilitates degradation of VOZ1/2 transcription factors

PLANT CELL AND ENVIRONMENT, 41(10), 2463–2474.

By: D. Selote, A. Matthiadis n, J. Gillikin, M. Sato* & T. Long

author keywords: abiotic stress; Arabidopsis thaliana; BRUTUS; ubiquitin-proteasome system; VOZ1/2
Sources: Web Of Science, ORCID
Added: October 16, 2018

2018 journal article

The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis

Plant Molecular Biology, 97(4-5), 297–309.

By: R. Samira n, B. Li*, D. Kliebenstein*, C. Li n, E. Davis, J. Gillikin n, T. Long

author keywords: Arabidopsis thaliana; Glucosinolates; Heterodera schachtii; Iron homeostasis; ILR3; PYE
Sources: ORCID, Crossref
Added: December 4, 2019

2017 review

More than meets the eye: Emergent properties of transcription factors networks in Arabidopsis

[Review of ]. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 1860(1), 64–74.

By: D. Muhammad, S. Schmittling, C. Williams & T. Long

author keywords: Transcription factor networks (TFNs); Emergent properties; Mathematical modeling
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Further insight into BRUTUS domain composition and functionality

PLANT SIGNALING & BEHAVIOR, 11(8).

By: A. Matthiadis & T. Long

author keywords: Arabidopsis thaliana; BRUTUS (BTS); hemerythrin (HHE); iron homeostasis; multidomain protein; Pirh2; RING E3
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Clustering and Differential Alignment Algorithm: Identification of Early Stage Regulators in the Arabidopsis thaliana Iron Deficiency Response

PLOS ONE, 10(8).

By: A. Koryachko, A. Matthiadis, D. Muhammad, J. Foret*, S. Brady*, J. Ducoste, J. Tuck, T. Long, C. Williams

Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Computational approaches to identify regulators of plant stress response using high-throughput gene expression data

Current Plant Biology, 3-4, 20–29.

By: A. Koryachko n, A. Matthiadis n, J. Ducoste, J. Tuck, T. Long & C. Williams

author keywords: Stress response; Transcription factors; Gene regulatory networks; Algorithms; Arabidopsis thaliana
Sources: ORCID, Crossref
Added: December 14, 2019

2015 journal article

Iron-Binding E3 Ligase Mediates Iron Response in Plants by Targeting Basic Helix-Loop-Helix Transcription Factors

PLANT PHYSIOLOGY, 167(1), 273-+.

Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Chromate alters root system architecture and activates expression of genes involved in iron homeostasis and signaling in Arabidopsis thaliana

PLANT MOLECULAR BIOLOGY, 86(1-2), 35–50.

By: M. Martinez-Trujillo*, A. Mendez-Bravo*, R. Ortiz-Castro*, F. Hernandez-Madrigal*, E. Ibarra-Laclette*, L. Ruiz-Herrera*, T. Long, C. Cervantes* ...

author keywords: Chromium; Root development; Gene expression; Iron homeostasis; Arabidopsis
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 review

Fixating on metals: new insights into the role of metals in nodulation and symbiotic nitrogen fixation

[Review of ]. FRONTIERS IN PLANT SCIENCE, 5(FEB).

By: M. Gonzalez-Guerrero*, A. Matthiadis, A. Saez* & T. Long

author keywords: symbiotic nitrogen fixation (SNF); metals; legume; rhizobia; nodule; iron; zinc; copper
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

A Single Amino Acid Alteration in PGR5 Confers Resistance to Antimycin A in Cyclic Electron Transport around PSI

Plant and Cell Physiology, 54(9), 1525–1534.

By: K. Sugimoto*, Y. Okegawa*, A. Tohri*, T. Long, S. Covert*, T. Hisabori*, T. Shikanai*

author keywords: Antimycin A; Arabidopsis thaliana; Cyclic electron transport; FQR; PGR5; Pinus taeda
Source: ORCID
Added: February 11, 2020

2013 review

Ironing out the issues: Integrated approaches to understanding iron homeostasis in plants

[Review of ]. PLANT SCIENCE, 210, 250–259.

By: R. Samira, A. Stallmann n, L. Massenburg* & T. Long

author keywords: Fe homeostasis; Fe translocation; Systems biology; Elemental analysis; Predictive model
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Many needles in a haystack: cell-type specific abiotic stress responses

Current Opinion in Plant Biology, 14(3), 325–331.

By: T. Long

Sources: ORCID, Crossref
Added: February 11, 2020

2010 journal article

The bHLH Transcription Factor POPEYE Regulates Response to Iron Deficiency in Arabidopsis Roots

The Plant Cell, 22(7), 2219–2236.

By: T. Long, H. Tsukagoshi*, W. Busch*, B. Lahner*, D. Salt* & P. Benfey*

Source: ORCID
Added: February 11, 2020

2009 journal article

Development rooted in interwoven networks

Developmental Biology, 331(2), 386.

By: P. Benfey, H. Cui, R. Twigg, T. Long, A. Iyer-Pascuzzi, H. Tsukagoshi, R. Sozzani, T. Jackson, J. Van Norman, M. Moreno-Risueno

Sources: Crossref, ORCID
Added: March 5, 2020

2008 journal article

Cell Identity Mediates the Response of Arabidopsis Roots to Abiotic Stress

Science, 320(5878), 942–945.

By: J. Dinneny*, T. Long, J. Wang*, J. Jung*, D. Mace*, S. Pointer*, C. Barron*, S. Brady*, J. Schiefelbein*, P. Benfey*

Source: ORCID
Added: February 11, 2020

2008 journal article

Conserved role of PROTON GRADIENT REGULATION 5 in the regulation of PSI cyclic electron transport

Planta, 228(6), 907–918.

By: T. Long, Y. Okegawa*, T. Shikanai*, G. Schmidt* & S. Covert*

author keywords: Arabidopsis; Cyclic electron transport; Nonphotochemical quenching; Photosynthesis; PGR5; Stress tolerance
Sources: ORCID, Crossref
Added: February 11, 2020

2008 journal article

Systems Approaches to Identifying Gene Regulatory Networks in Plants

Annual Review of Cell and Developmental Biology, 24, 81–103.

By: T. Long, S. Brady & P. Benfey*

author keywords: systems biology; Arabidopsis; transcription factors; emergent properties; modeling; genomics
Source: ORCID
Added: February 11, 2020

2007 journal article

A Balanced PGR5 Level is Required for Chloroplast Development and Optimum Operation of Cyclic Electron Transport Around Photosystem I

Plant and Cell Physiology, 48(10), 1462–1471.

By: Y. Okegawa, T. Long, M. Iwano, S. Takayama, Y. Kobayashi, S. Covert, T. Shikanai

author keywords: antimycin A; Arabidopsis; ferredoxin; NPQ; PGR5; PSI; cyclic electron transport
Source: ORCID
Added: February 11, 2020

2006 journal article

Transcription factors and hormones: new insights into plant cell differentiation

Current Opinion in Cell Biology, 18(6), 710–714.

By: T. Long & P. Benfey*

Sources: ORCID, Crossref
Added: February 11, 2020

2006 journal article

Unraveling the Dynamic Transcriptome

The Plant Cell, 18(9), 2101–2111.

By: S. Brady*, T. Long & P. Benfey*

Source: ORCID
Added: February 11, 2020

1998 journal article

Intragenic Recombination and Diversifying Selection Contribute to the Evolution of Downy Mildew Resistance at the RPP8 Locus of Arabidopsis

The Plant Cell, 10(11), 1861–1874.

By: J. McDowell*, M. Dhandaydham*, T. Long, M. Aarts*, S. Goff*, E. Holub*, J. Dangl*

Source: ORCID
Added: February 11, 2020

Employment

Updated: August 7th, 2020 23:03

North Carolina State University Raleigh, NC, US
Associate Professor Plant and Microbial Biology