Works (12)

Updated: September 9th, 2024 05:01

2024 article

Genotyping-by-Sequencing Reveals Population Differentiation and Linkage Disequilibrium in <i>Alternaria linariae</i> from Tomato

Adhikari, T. B., Olukolu, B. A., Paudel, R., Pandey, A., Halterman, D., & Louws, F. J. (2024, February 22). PHYTOPATHOLOGY, Vol. 2.

By: T. Adhikari n, B. Olukolu*, R. Paudel n, A. Pandey n, D. Halterman* & F. Louws n

author keywords: asexual reproduction; linkage disequilibrium; population biology; population differentiation
TL;DR: Evidence of a high level of population genetic differentiation in A. linariae is provided, which reinforces the importance of developing tomato varieties with broad-spectrum resistance to various isolates of A. Linariae. (via Semantic Scholar)
UN Sustainable Development Goal Categories
10. Reduced Inequalities (OpenAlex)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: March 18, 2024

2024 review

Microbiome-Mediated Strategies to Manage Major Soil-Borne Diseases of Tomato

[Review of ]. PLANTS-BASEL, 13(3).

By: S. Meshram* & T. Adhikari n

author keywords: tomato; Solanum lycopersicon L.; plant-microbiome interactions; root exudates; plant immunity; integrated disease management; Fusarium oxysporum f. sp. lycopersici; Ralstonia solanacearum; Verticillium dahliae; Meloidogyne spp.
Sources: Web Of Science, NC State University Libraries, ORCID
Added: February 26, 2024

2023 journal article

Molecular mapping of quantitative trait loci for resistance to early blight in tomatoes

Frontiers in Plant Science, 14.

By: T. Adhikari n, M. Siddique n, F. Louws n, S. Sim* & D. Panthee n

author keywords: early blight; heritability estimates; QTL analysis; tomatoes; Solanum lycopersicum (L; )
TL;DR: It is demonstrated that genetic control of EB resistance in NC 1CELBR is polygenic, and this study may facilitate further fine mapping of the EB-resistant QTL and marker-assisted selection to transfer EB resistance genes into elite tomato varieties, including broadening the genetic diversity ofEB resistance in tomatoes. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: July 3, 2023

2023 article

Tissues and mechanisms associated with Verticillium wilt resistance in tomato using bi-grafted near-isogenic lines

Oh, Y., Ingram, T., Shekasteband, R., Adhikari, T., Louws, F. J., & Dean, R. A. (2023, May 15). (M. Höfte, Ed.). JOURNAL OF EXPERIMENTAL BOTANY, Vol. 5.

By: Y. Oh n, T. Ingram n, R. Shekasteband n, T. Adhikari n, F. Louws n & R. Dean n

Contributors: Y. Oh n, T. Ingram n, R. Shekasteband n, T. Adhikari n, F. Louws n & R. Dean n

Ed(s): M. Höfte

author keywords: Defense response; gene expression; grafting; secreted proteins; tomato; Verticillium dahliae
TL;DR: These findings advance knowledge of molecular mechanisms underlying the tomato–V. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: May 16, 2023

2022 journal article

RNA-Seq and Gene Regulatory Network Analyses Uncover Candidate Genes in the Early Defense to Two Hemibiotrophic Colletorichum spp. in Strawberry

FRONTIERS IN GENETICS, 12.

By: T. Adhikari*, R. Aryal*, L. Redpath*, L. Broeck, H. Ashrafi, A. Philbrick*, R. Jacobs, R. Sozzani, F. Louws*

author keywords: Colletotrichum acutatum; Colletotrichum gloeosporioides; Fragaria x ananassa; rate-reducing resistance; gene regulatory network
TL;DR: Comparison transcriptome analyses and Gene regulatory network inference analysis revealed candidate transcription factors (TFs) such as GATA5 and MYB-10, and their downstream targets were upregulated in resistant interactions, which can provide valuable insights into transcriptional changes during resistant and susceptible interactions. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: April 25, 2022

2020 journal article

Comparative Genome Analyses of 18 Verticillium dahliae Tomato Isolates Reveals Phylogenetic and Race Specific Signatures

FRONTIERS IN MICROBIOLOGY, 11.

By: T. Ingram n, Y. Oh n, T. Adhikari n, F. Louws n & R. Dean n

author keywords: Solanum lycopersicum; secreted effectors; whole genome resequencing; soilborne fungus; Verticillium dahliae race 2
TL;DR: Four highly clonal lineages/groups were discovered, including a lineage unique to North Carolina isolates, which had the rare MAT1-1 mating type and may suggest that these highly variable regions are enriched in race determinant genes, consistent with the two-speed genome hypothesis. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: January 4, 2021

2020 journal article

Gene Genealogies Reveal High Nucleotide Diversity and Admixture Haplotypes Within Three Alternaria Species Associated with Tomato and Potato

Phytopathology®, 110(8), 1449–1464.

By: T. Adhikari n, T. Ingram n, D. Halterman* & F. Louws n

MeSH headings : Alternaria; Haplotypes; Solanum lycopersicum; North Carolina; Nucleotides; Phylogeny; Plant Diseases; Solanum tuberosum; Wisconsin
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: September 8, 2024

2020 review

Meloidogyne enterolobii, a Major Threat to Tomato Production: Current Status and Future Prospects for Its Management

[Review of ]. FRONTIERS IN PLANT SCIENCE, 11.

By: A. Philbrick n, T. Adhikari n, F. Louws n & A. Gorny n

author keywords: root-knot nematode; population biology; disease management; RNA interference; gene editing
TL;DR: The current knowledge on geographic distribution, host range, population biology, control measures, and proposed future strategies to improve M. enterolobii control in tomato are reviewed. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: December 21, 2020

2019 journal article

Assessing Rate-Reducing Foliar Resistance to Anthracnose Crown Rot and Fruit Rot in Strawberry

Plant Disease, 104(2), 398–407.

By: R. Jacobs n, T. Adhikari n, J. Pattison n, G. Yencho n, G. Fernandez n & F. Louws n

author keywords: etiology; fungi; fruit; pathogen detection; small fruits; techniques
MeSH headings : Colletotrichum; Fragaria; Fruit; North Carolina; Plant Diseases
TL;DR: Overall, rate-reducing resistance to HBI and ACR in strawberry identified in this study could be utilized in breeding programs to develop durable resistance to anthracnose in North Carolina. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Sources: ORCID, Crossref, NC State University Libraries
Added: March 16, 2020

2019 journal article

First Report of Anthracnose Causing Both Crown and Fruit Rot of Strawberry by Colletotrichum siamense in North Carolina

Plant Disease, 103(7), PDIS-02–19-0314.

By: T. Adhikari n, J. Chacon n, G. Fernandez n & F. Louws n

author keywords: fungi; small fruits; etiology
Sources: ORCID, Crossref, NC State University Libraries
Added: June 6, 2019

2019 journal article

Phenotypic and Genetic Diversity of Xanthomonas perforans Populations from Tomato in North Carolina

PHYTOPATHOLOGY, 109(9), 1533–1543.

author keywords: population biology
MeSH headings : Florida; Genetic Variation; Solanum lycopersicum / microbiology; North Carolina; Phylogeny; Plant Diseases / microbiology; Xanthomonas / classification; Xanthomonas / genetics
TL;DR: These results provide insights into bacterial spot management strategies in tomato should focus on deploying resistance genes to combat emerging pathogenic races of X. perforans and overcome the challenges currently posed by intense use of copper-based bactericides. (via Semantic Scholar)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: October 28, 2019

2018 journal article

Inheritance of Resistance to Colletotrichum gloeosporioides and C. acutatum in Strawberry

Phytopathology, 109(3), 428–435.

By: R. Jacobs, T. Adhikari n, J. Pattison*, G. Yencho, G. Fernandez* & F. Louws n

MeSH headings : Colletotrichum; Fragaria; Genotype; Phenotype; Plant Diseases / microbiology
TL;DR: Findings provide valuable insight into the genetic basis of resistance, and the evaluation and deployment of resistance to HBIs and ACR in strawberry breeding programs. (via Semantic Scholar)
Sources: ORCID, Web Of Science, NC State University Libraries, Crossref
Added: April 2, 2019

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