Thomas David Houfek

Works (4)

Updated: July 5th, 2023 15:58

2008 article

Sequence and genetic map of Meloidogyne hapla : A compact nematode genome for plant parasitism

Opperman, C. H., Bird, D. M., Williamson, V. M., Rokhsar, D. S., Burke, M., Cohn, J., … Windham, E. (2008, September 22). Proceedings of the National Academy of Sciences, Vol. 105, pp. 14802–14807.

By: C. Opperman n, D. Bird n , V. Williamson *, D. Rokhsar *, M. Burke n, J. Cohn n, J. Cromer n, S. Diener n ...

Contributors: C. Opperman n, D. Bird n , V. Williamson *, D. Rokhsar *, M. Burke n, J. Cohn n, J. Cromer n, S. Diener n ...

author keywords: compaction; dauer; development; horizontal gene transfer; gene
MeSH headings : Animals; Base Sequence; Caenorhabditis elegans / genetics; Chromosome Mapping; Evolution, Molecular; Gene Duplication; Gene Transfer, Horizontal; Genome, Helminth; Host-Parasite Interactions / genetics; Molecular Sequence Data; Multigene Family; Operon; Phylogeny; Plants / parasitology; Synteny; Tylenchoidea / genetics
topics (OpenAlex): Nematode management and characterization studies; Legume Nitrogen Fixing Symbiosis; Genetic and Environmental Crop Studies
TL;DR: Meloidogyne hapla is established as a tractable model plant-parasitic nematode amenable to forward and reverse genetics, and a complete genome sequence is presented that defines a platform to elucidate mechanisms of parasitism by what is the largest uncontrolled group of plant pathogens worldwide. (via Semantic Scholar)
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UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2005 journal article

Alkahest NuclearBLAST: a user-friendly BLAST management and analysis system

BMC Bioinformatics, 6.

By: S. Diener, T. Houfek, S. Kalat, D. Windham, M. Burke, C. Opperman, R. Dean 

Source: NC State University Libraries
Added: August 6, 2018

2004 article

Corrigendum to âCharacterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags fromTrichoderma reeseiâ [FEMS Microbiol. Lett. 230 (2004) 275â282]

Diener, S. E., Dunn-Coleman, N., Foreman, P., Houfek, T. D., Teunissen, P. J. M., Solingen, P., … Dean, R. A. (2004, June 1). FEMS Microbiology Letters, Vol. 235, p. 209.

By: S. Diener n, N. Dunn-Coleman, P. Foreman, T. Houfek n, P. Teunissen, P. Solingen, L. Dankmeyer, T. Mitchell n, M. Ward, R. Dean n 

topics (OpenAlex): Microbial Community Ecology and Physiology
Sources: NC State University Libraries, NC State University Libraries
Added: August 6, 2018

2003 article

Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags fromTrichoderma reesei

Diener, S. E., Dunn-Coleman, N., Foreman, P., Houfek, T. D., Teunissen, P. J. M., Solingen, P., … Dean, R. A. (2003, December 30). FEMS Microbiology Letters, Vol. 230, pp. 275–282.

By: S. Diener n, N. Dunn-Coleman, P. Foreman, T. Houfek n, P. Teunissen, P. Solingen, L. Dankmeyer, T. Mitchell n, M. Ward, R. Dean n 

author keywords: secretion; protein processing; Trichoderma reesei; expressed sequence tag
MeSH headings : Computational Biology; Expressed Sequence Tags; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Library; Protein Processing, Post-Translational; Protein Transport; Sequence Analysis, DNA; Trichoderma / genetics
topics (OpenAlex): Fungal and yeast genetics research; Biofuel production and bioconversion; Bioinformatics and Genomic Networks
TL;DR: In an attempt to identify genes involved in protein folding and ornamentation steps in Trichoderma reesei, the 5' ends of 21888 cDNA clones were sequenced from which a unique set of over 5000 were also 3' sequenced. (via Semantic Scholar)
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UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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