@article{crouch_beirn_boehm_carbone_clarke_kerns_malapi-wight_mitchell_venu_tredway_2021, title={Genome Resources for Seven Fungal Isolates That Cause Dollar Spot Disease in Turfgrass, Including Clarireedia jacksonii and C. monteithiana}, volume={105}, ISSN={["1943-7692"]}, DOI={10.1094/PDIS-06-20-1296-A}, number={3}, journal={PLANT DISEASE}, author={Crouch, Jo Anne and Beirn, Lisa A. and Boehm, Michael J. and Carbone, Ignazio and Clarke, Bruce B. and Kerns, James P. and Malapi-Wight, Martha and Mitchell, Thomas K. and Venu, R. C. and Tredway, Lane P.}, year={2021}, month={Mar}, pages={691–694} } @article{nunes_gowda_sailsbery_xue_chen_brown_oh_mitchell_dean_2011, title={Diverse and tissue-enriched small RNAs in the plant pathogenic fungus, Magnaporthe oryzae}, volume={12}, DOI={10.1186/1471-2164-12-288}, journal={BMC Genomics}, author={Nunes, C. C. and Gowda, M. and Sailsbery, J. and Xue, M. F. and Chen, F. and Brown, D. E. and Oh, Y. and Mitchell, T. K. and Dean, Ralph}, year={2011} } @misc{meng_brown_ebbole_torto-alalibo_oh_deng_mitchell_dean_2009, title={Gene Ontology annotation of the rice blast fungus, Magnaporthe oryzae}, volume={9}, ISSN={["1471-2180"]}, DOI={10.1186/1471-2180-9-s1-s8}, journal={BMC MICROBIOLOGY}, author={Meng, Shaowu and Brown, Douglas E. and Ebbole, Daniel J. and Torto-Alalibo, Trudy and Oh, Yeon Yee and Deng, Jixin and Mitchell, Thomas K. and Dean, Ralph A.}, year={2009}, month={Feb} } @article{craven_velez_cho_lawrence_mitchell_2008, title={Anastomosis is required for virulence of the fungal necrotroph Alternaria brassicicola}, volume={7}, ISSN={["1535-9786"]}, DOI={10.1128/EC.00423-07}, number={4}, journal={EUKARYOTIC CELL}, author={Craven, Kelly D. and Velez, Heriberto and Cho, Yangrae and Lawrence, Christopher B. and Mitchell, Thomas K.}, year={2008}, month={Apr}, pages={675–683} } @misc{oh_donofrio_pan_coughlan_brown_meng_mitchell_dean_2008, title={Transcriptome analysis reveals new insight into appressorium formation and function in the rice blast fungus Magnaporthe oryzae}, volume={9}, ISSN={["1474-760X"]}, DOI={10.1186/gb-2008-9-5-r85}, number={5}, journal={GENOME BIOLOGY}, author={Oh, Yeonyee and Donofrio, Nicole and Pan, Huaqin and Coughlan, Sean and Brown, Douglas E. and Meng, Shaowu and Mitchell, Thomas and Dean, Ralph A.}, year={2008} } @article{meng_patel_heist_betts_tucker_galadima_donofrio_brown_mitchell_li_et al._2007, title={A systematic analysis of T-DNA insertion events in Magnaporthe oryzae}, volume={44}, ISSN={["1096-0937"]}, DOI={10.1016/j.fgb.2007.04.002}, number={10}, journal={FUNGAL GENETICS AND BIOLOGY}, author={Meng, Yan and Patel, Gayatri and Heist, Melanie and Betts, Melania F. and Tucker, Sara L. and Galadima, Natalia and Donofrio, Nicole M. and Brown, Doug and Mitchell, Thomas K. and Li, Lei and et al.}, year={2007}, month={Oct}, pages={1050–1064} } @article{betts_tucker_galadima_meng_patel_li_donofrio_floyd_nolin_brown_et al._2007, title={Development of a high throughput transformation system for insertional mutagenesis in Magnaporthe oryzae}, volume={44}, ISSN={["1087-1845"]}, DOI={10.1016/j.fgb.2007.05.001}, number={10}, journal={FUNGAL GENETICS AND BIOLOGY}, author={Betts, Melania F. and Tucker, Sara L. and Galadima, Natalia and Meng, Yan and Patel, Gayatri and Li, Lei and Donofrio, Nicole and Floyd, Anna and Nolin, Shelly and Brown, Doug and et al.}, year={2007}, month={Oct}, pages={1035–1049} } @article{torto-alalibo_tripathy_smith_arredondo_zhou_li_chibucos_qutob_gijzen_mao_et al._2007, title={Expressed sequence tags from Phytophthora sojae reveal genes specific to development and infection}, volume={20}, ISSN={["1943-7706"]}, DOI={10.1094/MPMI-20-7-0781}, number={7}, journal={MOLECULAR PLANT-MICROBE INTERACTIONS}, author={Torto-Alalibo, Trudy A. and Tripathy, Sucheta and Smith, Brian M. and Arredondo, Felipe D. and Zhou, Lecong and Li, Hua and Chibucos, Marcus C. and Qutob, Dinah and Gijzen, Mark and Mao, Chunhong and et al.}, year={2007}, month={Jul}, pages={781–793} } @article{cho_cramer_kim_davis_mitchell_figuli_pryor_lemasters_lawrence_2007, title={The Fus3/Kss1 MAP kinase homolog Amk1 regulates the expression of genes encoding hydrolytic enzymes in Alternaria brassicicola}, volume={44}, ISSN={["1087-1845"]}, DOI={10.1016/j.fgb.2006.11.015}, number={6}, journal={FUNGAL GENETICS AND BIOLOGY}, author={Cho, Yangrae and Cramer, Robert A., Jr. and Kim, Kwang-Hyung and Davis, Josh and Mitchell, Thomas K. and Figuli, Patricia and Pryor, Barry M. and Lemasters, Emily and Lawrence, Christopher B.}, year={2007}, month={Jun}, pages={543–553} } @article{jeong_mitchell_dean_2007, title={The Magnaporthe grisea snodprot1 homolog, MSPI, is required for virulence}, volume={273}, ISSN={["1574-6968"]}, DOI={10.1111/j.1574-6968.2007.00796.x}, number={2}, journal={FEMS MICROBIOLOGY LETTERS}, author={Jeong, Jun Seop and Mitchell, Thomas K. and Dean, Ralph A.}, year={2007}, month={Aug}, pages={157–165} } @article{taylor_mitchell_daub_2006, title={An oxidoreductase is involved in cercosporin degradation by the bacterium Xanthomonas campestris pv. zinniae}, volume={72}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.00483-06}, number={9}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Taylor, Tanya V. and Mitchell, Thomas K. and Daub, Margaret E.}, year={2006}, month={Sep}, pages={6070–6078} } @article{cramer_la rota_cho_thon_craven_knudson_mitchell_lawrence_2006, title={Bioinformatic analysis of expressed sequence tags derived from a compatible Alternaria brassicicola-Brassica oleracea interaction}, volume={7}, ISSN={["1364-3703"]}, DOI={10.1111/J.1364-3703.2006.00324.X}, number={2}, journal={MOLECULAR PLANT PATHOLOGY}, author={Cramer, RA and La Rota, CM and Cho, Y and Thon, M and Craven, KD and Knudson, DL and Mitchell, TK and Lawrence, CB}, year={2006}, month={Mar}, pages={113–124} } @article{donofrio_oh_lundy_pan_brown_jeong_coughlan_mitchell_dean_2006, title={Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe grisea}, volume={43}, ISSN={["1087-1845"]}, DOI={10.1016/j.fgb.2006.03.005}, number={9}, journal={FUNGAL GENETICS AND BIOLOGY}, author={Donofrio, N. M. and Oh, Y. and Lundy, R. and Pan, H. and Brown, D. E. and Jeong, J. S. and Coughlan, S. and Mitchell, T. K. and Dean, R. A.}, year={2006}, month={Sep}, pages={605–617} } @article{walker_mitchell_marek_2006, title={Influence of temperature and time of year on colonization of bermudagrass roots by Ophiosphaerella herpotricha}, volume={90}, ISSN={["1943-7692"]}, DOI={10.1094/PD-90-1326}, number={10}, journal={PLANT DISEASE}, author={Walker, N. R. and Mitchell, T. K. and Marek, S. M.}, year={2006}, month={Oct}, pages={1326–1330} } @article{soderlund_haller_pampanwar_ebbole_farman_orbach_wang_wing_xu_brown_et al._2006, title={MGOS: A resource for studying Magnaporthe grisea and Oryza sativa interactions}, volume={19}, ISSN={["1943-7706"]}, DOI={10.1094/MPMI-19-1055}, number={10}, journal={MOLECULAR PLANT-MICROBE INTERACTIONS}, author={Soderlund, Carol and Haller, Karl and Pampanwar, Vishal and Ebbole, Daniel and Farman, Mark and Orbach, Marc J. and Wang, Guo-Liang and Wing, Rod and Xu, Jin-Rong and Brown, Doug and et al.}, year={2006}, month={Oct}, pages={1055–1061} } @article{thon_pan_diener_papalas_taro_mitchell_dean_2006, title={The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae}, volume={7}, number={2}, journal={Genome Biology}, author={Thon, M. R. and Pan, H. Q. and Diener, S. and Papalas, J. and Taro, A. and Mitchell, T. K. and Dean, R. A.}, year={2006} } @article{craven_peterson_windham_mitchell_martin_2005, title={Molecular identification of the turf grass rapid blight pathogen}, volume={97}, ISSN={["1557-2536"]}, DOI={10.3852/mycologia.97.1.160}, number={1}, journal={MYCOLOGIA}, author={Craven, KD and Peterson, PD and Windham, DE and Mitchell, TK and Martin, SB}, year={2005}, pages={160–166} } @article{donofrio_rajagopalon_brown_diener_windham_nolin_floyd_mitchell_galadima_tucker_et al._2005, title={PACLIMS: A component LIM system for high-throughput functional genomic analysis}, volume={6}, journal={BMC Bioinformatics}, author={Donofrio, N. and Rajagopalon, R. and Brown, D. and Diener, S. and Windham, D. and Nolin, S. and Floyd, A. and Mitchell, T. and Galadima, N. and Tucker, S. and et al.}, year={2005} } @article{dean_talbot_ebbole_farman_mitchell_orbach_thon_kulkarni_xu_pan_et al._2005, title={The genome sequence of the rice blast fungus Magnaporthe grisea}, volume={434}, ISSN={["1476-4687"]}, DOI={10.1038/nature03449}, number={7036}, journal={NATURE}, author={Dean, RA and Talbot, NJ and Ebbole, DJ and Farman, ML and Mitchell, TK and Orbach, MJ and Thon, M and Kulkarni, R and Xu, JR and Pan, HQ and et al.}, year={2005}, month={Apr}, pages={980–986} } @article{diener_dunn-coleman_foreman_houfek_teunissen_solingen_dankmeyer_mitchell_ward_dean_2004, title={Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei}, volume={230}, ISSN={["1574-6968"]}, DOI={10.1016/S0378-1097(03)00916-9}, number={2}, journal={FEMS MICROBIOLOGY LETTERS}, author={Diener, SE and Dunn-Coleman, N and Foreman, P and Houfek, TD and Teunissen, PJM and Solingen, P and Dankmeyer, L and Mitchell, TK and Ward, M and Dean, RA}, year={2004}, month={Jan}, pages={275–282} } @article{diener_dunn-coleman_foreman_houfek_teunissen_solingen_dankmeyer_mitchell_ward_dean_2004, title={Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei (vol 230, pg 275, 2004)}, volume={235}, DOI={10.1111/j.1574-6968.2004.tb09588.x}, number={1}, journal={FEMS Microbiology Letters}, author={Diener, S. E. and Dunn-Coleman, N. and Foreman, P. and Houfek, T. D. and Teunissen, P. J. M. and Solingen, P. Van and Dankmeyer, L. and Mitchell, T. K. and Ward, M. and Dean, Ralph}, year={2004}, pages={209} } @article{diener_chellappan_mitchell_dunn-coleman_ward_dean_2004, title={Insight into Trichoderma reesei's genome content, organization and evolution revealed through BAC library characterization}, volume={41}, ISSN={["1096-0937"]}, DOI={10.1016/j.fgb.2004.08.007}, number={12}, journal={FUNGAL GENETICS AND BIOLOGY}, author={Diener, SE and Chellappan, MK and Mitchell, TK and Dunn-Coleman, N and Ward, M and Dean, RA}, year={2004}, month={Dec}, pages={1077–1087} } @article{takano_choi_mitchell_okuno_dean_2003, title={Large scale parallel analysis of gene expression during infection-related morphogenesis of Magnaporthe grisea}, volume={4}, ISSN={["1464-6722"]}, DOI={10.1046/J.1364-3703.2003.00182.X}, number={5}, journal={MOLECULAR PLANT PATHOLOGY}, author={Takano, Y and Choi, WB and Mitchell, TK and Okuno, T and Dean, RA}, year={2003}, month={Sep}, pages={337–346} } @misc{mitchell_thon_jeong_brown_deng_dean_2003, title={The rice blast pathosystem as a case study for the development of new tools and raw materials for genome analysis of fungal plant pathogens}, volume={159}, ISSN={["0028-646X"]}, DOI={10.1046/j.1469-8137.2003.00787.x}, number={1}, journal={NEW PHYTOLOGIST}, author={Mitchell, TK and Thon, MR and Jeong, JS and Brown, D and Deng, JX and Dean, RA}, year={2003}, month={Jul}, pages={53–61} } @article{foreman_brown_dankmeyer_dean_diener_dunn-coleman_goedegebuur_houfek_england_kelley_et al._2003, title={Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei}, volume={278}, ISSN={["1083-351X"]}, DOI={10.1074/jbc.M304750200}, number={34}, journal={JOURNAL OF BIOLOGICAL CHEMISTRY}, author={Foreman, PK and Brown, D and Dankmeyer, L and Dean, R and Diener, S and Dunn-Coleman, NS and Goedegebuur, F and Houfek, TD and England, GJ and Kelley, AS and et al.}, year={2003}, month={Aug}, pages={31988–31997} } @article{mitchell_alejos-gonzalez_gracz_danehower_daub_chilton_2003, title={Xanosporic acid, an intermediate in bacterial degradation of the fungal phototoxin cercosporin}, volume={62}, ISSN={["0031-9422"]}, DOI={10.1016/S0031-9422(02)00517-4}, number={5}, journal={PHYTOCHEMISTRY}, author={Mitchell, TK and Alejos-Gonzalez, F and Gracz, HS and Danehower, DA and Daub, ME and Chilton, WS}, year={2003}, month={Mar}, pages={723–732} } @article{mitchell_chilton_daub_2002, title={Biodegradation of the polyketide toxin cercosporin}, volume={68}, ISSN={["0099-2240"]}, DOI={10.1128/AEM.68.9.4173-4181.2002}, number={9}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Mitchell, TK and Chilton, WS and Daub, ME}, year={2002}, month={Sep}, pages={4173–4181} } @article{martin_blackmon_rajagopalan_houfek_sceeles_denn_mitchell_brown_wing_dean_2002, title={MagnaportheDB: a federated solution for integrating physical and genetic map data with BAC end derived sequences for the rice blast fungus Magnaporthe grisea}, volume={30}, ISSN={["0305-1048"]}, DOI={10.1093/nar/30.1.121}, number={1}, journal={NUCLEIC ACIDS RESEARCH}, author={Martin, SL and Blackmon, BP and Rajagopalan, R and Houfek, TD and Sceeles, RG and Denn, SO and Mitchell, TK and Brown, DE and Wing, RA and Dean, RA}, year={2002}, month={Jan}, pages={121–124} }