@article{azcarate-peril_roach_marsh_chey_sandborn_ritter_savaiano_klaenhammer_2021, title={A double-blind, 377-subject randomized study identifies Ruminococcus, Coprococcus, Christensenella, and Collinsella as long-term potential key players in the modulation of the gut microbiome of lactose intolerant individuals by galacto-oligosaccharides}, volume={13}, ISSN={["1949-0984"]}, DOI={10.1080/19490976.2021.1957536}, number={1}, journal={GUT MICROBES}, author={Azcarate-Peril, M. A. and Roach, J. and Marsh, A. and Chey, William D. and Sandborn, William J. and Ritter, Andrew J. and Savaiano, Dennis A. and Klaenhammer, T. R.}, year={2021}, month={Jan} }
 @article{goh_barrangou_klaenhammer_2021, title={In Vivo Transcriptome of Lactobacillus acidophilus and Colonization Impact on Murine Host Intestinal Gene Expression}, volume={12}, ISSN={["2150-7511"]}, url={https://doi.org/10.1128/mBio.03399-20}, DOI={10.1128/mBio.03399-20}, number={1}, journal={MBIO}, publisher={American Society for Microbiology}, author={Goh, Yong Jun and Barrangou, Rodolphe and Klaenhammer, Todd R.}, editor={Huffnagle, Gary B.Editor}, year={2021} }
 @article{klaenhammer_2019, title={Get Cultured: Eat Bacteria}, volume={10}, ISSN={["1941-1413"]}, DOI={10.1146/annurev-food-032818-121826}, journal={ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 10}, author={Klaenhammer, Todd Robert}, year={2019}, pages={1–20} }
 @article{stout_sanozky-dawes_goh_crawley_klaenhammer_barrangou_2018, title={Deletion-based escape of CRISPR-Cas9 targeting in Lactobacillus gasseri}, volume={164}, ISSN={["1465-2080"]}, DOI={10.1099/mic.0.000689}, number={9}, journal={MICROBIOLOGY-SGM}, publisher={Microbiology Society}, author={Stout, Emily A. and Sanozky-Dawes, Rosemary and Goh, Yong Jun and Crawley, Alexandra B. and Klaenhammer, Todd R. and Barrangou, Rodolphe}, year={2018}, month={Sep}, pages={1098–1111} }
 @article{bumgardner_zhang_lavoy_andre_frank_kajikawa_klaenhammer_dean_2018, title={Nod2 is required for antigen-specific humoral responses against antigens orally delivered using a recombinant Lactobacillus vaccine platform}, volume={13}, ISSN={["1932-6203"]}, DOI={10.1371/journal.pone.0196950}, number={5}, journal={PLOS ONE}, author={Bumgardner, Sara A. and Zhang, Lin and LaVoy, Alora S. and Andre, Barbara and Frank, Chad B. and Kajikawa, Akinobu and Klaenhammer, Todd R. and Dean, Gregg A.}, year={2018}, month={May} }
 @article{daughtry_johanningsmeier_sanozky-dawes_klaenhammer_barrangou_2018, title={Phenotypic and genotypic diversity of Lactobacillus buchneri strains isolated from spoiled, fermented cucumber}, volume={280}, ISSN={["1879-3460"]}, DOI={10.1016/j.ijfoodmicro.2018.04.044}, journal={INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY}, publisher={Elsevier BV}, author={Daughtry, Katheryne V and Johanningsmeier, Suzanne D. and Sanozky-Dawes, Rosemary and Klaenhammer, Todd R. and Barrangou, Rodolphe}, year={2018}, month={Sep}, pages={46–56} }
 @article{moller_goh_rasmussen_cypryk_celebioglu_klaenhammer_svensson_abou hachem_2017, title={An Extracellular Cell-Attached Pullulanase Confers Branched alpha-Glucan Utilization in Human Gut Lactobacillus acidophilus}, volume={83}, ISSN={["1098-5336"]}, DOI={10.1128/aem.00402-17}, number={12}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Moller, Marie S. and Goh, Yong Jun and Rasmussen, Kasper Bowig and Cypryk, Wojciech and Celebioglu, Hasan Ufuk and Klaenhammer, Todd R. and Svensson, Birte and Abou Hachem, Maher}, year={2017}, month={Jun} }
 @article{stout_klaenhammer_barrangou_2017, title={CRISPR-Cas Technologies and Applications in Food Bacteria}, volume={8}, ISSN={["1941-1421"]}, DOI={10.1146/annurev-food-072816-024723}, number={1}, journal={ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 8}, publisher={Annual Reviews}, author={Stout, Emily and Klaenhammer, Todd and Barrangou, Rodolphe}, year={2017}, pages={413–437} }
 @article{selle_goh_johnson_sarah_andersen_barrangou_klaenhammer_2017, title={Deletion of Lipoteichoic Acid Synthase Impacts Expression of Genes Encoding Cell Surface Proteins in Lactobacillus acidophilus}, volume={8}, DOI={10.3389/fmicb.2017.00553}, journal={Frontiers in Microbiology}, publisher={Frontiers Media SA}, author={Selle, Kurt and Goh, Yong J. and Johnson, Brant R. and Sarah, O’Flaherty and Andersen, Joakim M. and Barrangou, Rodolphe and Klaenhammer, Todd R.}, year={2017}, month={Apr} }
 @article{theilmann_goh_nielsen_klaenhammer_barrangou_abou hachem_2017, title={Lactobacillus acidophilus Metabolizes Dietary Plant Glucosides and Externalizes Their Bioactive Phytochemicals}, volume={8}, ISSN={["2150-7511"]}, url={https://doi.org/10.1128/mBio.01421-17}, DOI={10.1128/mbio.01421-17}, number={6}, journal={MBIO}, publisher={American Society for Microbiology}, author={Theilmann, Mia C. and Goh, Yong Jun and Nielsen, Kristian Fog and Klaenhammer, Todd R. and Barrangou, Rodolphe and Abou Hachem, Maher}, editor={Martens, Eric and McFall-Ngai, Margaret J.Editors}, year={2017} }
 @article{johnson_o'flaherty_goh_carroll_barrangou_klaenhammer_2017, title={The S-layer Associated Serine Protease Homolog PrtX Impacts Cell Surface-Mediated Microbe-Host Interactions of Lactobacillus acidophilus NCFM}, volume={8}, ISSN={["1664-302X"]}, DOI={10.3389/fmicb.2017.01185}, journal={FRONTIERS IN MICROBIOLOGY}, publisher={Frontiers Media SA}, author={Johnson, Brant R. and O'Flaherty, Sarah and Goh, Yong Jun and Carroll, Ian and Barrangou, Rodolphe and Klaenhammer, Todd R.}, year={2017}, month={Jun} }
 @article{johnson_klaenhammer_2016, title={AcmB Is an S-Layer-Associated beta-N-Acetylglucosaminidase and Functional Autolysin in Lactobacillus acidophilus NCFM}, volume={82}, ISSN={["1098-5336"]}, DOI={10.1128/aem.02025-16}, number={18}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Johnson, Brant R. and Klaenhammer, Todd R.}, year={2016}, month={Sep}, pages={5687–5697} }
 @article{johnson_hymes_sanozky-dawes_henriksen_barrangou_klaenhammer_2016, title={Conserved S-Layer-Associated Proteins Revealed by Exoproteomic Survey of S-Layer-Forming Lactobacilli}, volume={82}, ISSN={["1098-5336"]}, url={https://doi.org/10.1128/AEM.01968-15}, DOI={10.1128/aem.01968-15}, number={1}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, publisher={American Society for Microbiology}, author={Johnson, Brant R. and Hymes, Jeffrey and Sanozky-Dawes, Rosemary and Henriksen, Emily DeCrescenzo and Barrangou, Rodolphe and Klaenhammer, Todd R.}, editor={Nojiri, H.Editor}, year={2016}, month={Jan}, pages={134–145} }
 @article{list_mashayekhi_bertini_nevers_2016, title={Development of a Transportation System Simulation Manual Framework From Theory to Practice}, ISSN={["2169-4052"]}, DOI={10.3141/2561-06}, number={2561}, journal={TRANSPORTATION RESEARCH RECORD}, author={List, George and Mashayekhi, Mehdi and Bertini, Robert L. and Nevers, Brandon}, year={2016}, pages={45–52} }
 @article{celebioglu_ejby_majumder_kobler_goh_thorsen_schmidt_o'flaherty_abou hachem_lahtinen_et al._2016, title={Differential proteome and cellular adhesion analyses of the probiotic bacterium Lactobacillus acidophilus NCFM grown on raffinose - an emerging prebiotic}, volume={16}, ISSN={["1615-9861"]}, DOI={10.1002/pmic.201500212}, number={9}, journal={PROTEOMICS}, author={Celebioglu, Hasan Ufuk and Ejby, Morten and Majumder, Avishek and Kobler, Carsten and Goh, Yong Jun and Thorsen, Kristian and Schmidt, Bjarne and O'Flaherty, Sarah and Abou Hachem, Maher and Lahtinen, Sampo J. and et al.}, year={2016}, month={May}, pages={1361–1375} }
 @article{hymes_johnson_barrangou_klaenhammer_2016, title={Functional Analysis of an S-Layer-Associated Fibronectin-Binding Protein in Lactobacillus acidophilus NCFM}, volume={82}, ISSN={["1098-5336"]}, DOI={10.1128/aem.00024-16}, number={9}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, publisher={American Society for Microbiology}, author={Hymes, Jeffrey P. and Johnson, Brant R. and Barrangou, Rodolphe and Klaenhammer, Todd R.}, editor={Dudley, E. G.Editor}, year={2016}, month={May}, pages={2676–2685} }
 @article{douglas_azcarate-peril_klaenhammer_2016, title={Genomic evolution of lactic acid bacteria: From single gene function to the pan-genome}, DOI={10.1002/9781118868386.ch3}, journal={Biotechnology of Lactic Acid Bacteria: Novel Applications, 2nd Edition}, author={Douglas, G. L. and Azcarate-Peril, M. A. and Klaenhammer, T. R.}, year={2016}, pages={32–54} }
 @article{durmaz_hu_aroian_klaenhammer_2016, title={Intracellular and Extracellular Expression of Bacillus thuringiensis Crystal Protein Cry5B in Lactococcus lactis for Use as an Anthelminthic}, volume={82}, ISSN={["1098-5336"]}, DOI={10.1128/aem.02365-15}, number={4}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Durmaz, Evelyn and Hu, Yan and Aroian, Raffi V. and Klaenhammer, Todd R.}, year={2016}, month={Feb}, pages={1286–1294} }
 @article{o'flaherty_klaenhammer_2016, title={Multivalent Chromosomal Expression of the Clostridium botulinum Serotype A Neurotoxin Heavy-Chain Antigen and the Bacillus anthracis Protective Antigen in Lactobacillus acidophilus}, volume={82}, ISSN={["1098-5336"]}, DOI={10.1128/aem.01533-16}, number={20}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={O'Flaherty, Sarah and Klaenhammer, Todd R.}, year={2016}, month={Oct}, pages={6091–6101} }
 @misc{hymes_klaenhammer_2016, title={Stuck in the Middle: Fibronectin-Binding Proteins in Gram-Positive Bacteria}, volume={7}, ISSN={["1664-302X"]}, DOI={10.3389/fmicb.2016.01504}, journal={FRONTIERS IN MICROBIOLOGY}, author={Hymes, Jeffrey P. and Klaenhammer, Todd R.}, year={2016}, month={Sep} }
 @article{selle_klaenhammer_barrangou_2015, title={CRISPR-based screening of genomic island excision events in bacteria}, volume={112}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.1508525112}, number={26}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, publisher={Proceedings of the National Academy of Sciences}, author={Selle, Kurt and Klaenhammer, Todd R. and Barrangou, Rodolphe}, year={2015}, month={Jun}, pages={8076–8081} }
 @article{sun_harris_mccann_guo_argimon_zhang_yang_jeffery_cooney_kagawa_et al._2015, title={Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera}, volume={6}, ISSN={["2041-1723"]}, DOI={10.1038/ncomms9322}, journal={NATURE COMMUNICATIONS}, publisher={Springer Nature}, author={Sun, Zhihong and Harris, Hugh M. B. and McCann, Angela and Guo, Chenyi and Argimon, Silvia and Zhang, Wenyi and Yang, Xianwei and Jeffery, Ian B. and Cooney, Jakki C. and Kagawa, Todd F. and et al.}, year={2015}, month={Sep} }
 @article{goh_klaenhammer_2015, title={Genetic Mechanisms of Prebiotic Oligosaccharide Metabolism in Probiotic Microbes}, volume={6}, ISSN={["1941-1421"]}, DOI={10.1146/annurev-food-022814-015706}, journal={ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 6}, author={Goh, Yong Jun and Klaenhammer, Todd R.}, year={2015}, pages={137–156} }
 @article{kajikawa_zhang_lavoy_bumgardner_klaenhammer_dean_2015, title={Mucosal Immunogenicity of Genetically Modified Lactobacillus acidophilus Expressing an HIV-1 Epitope within the Surface Layer Protein}, volume={10}, ISSN={["1932-6203"]}, DOI={10.1371/journal.pone.0141713}, number={10}, journal={PLOS ONE}, author={Kajikawa, Akinobu and Zhang, Lin and LaVoy, Alora and Bumgardner, Sara and Klaenhammer, Todd R. and Dean, Gregg A.}, year={2015}, month={Oct} }
 @article{sanozky-dawes_selle_o'flaherty_klaenhammer_barrangou_2015, title={Occurrence and activity of a type II CRISPR-Cas system in Lactobacillus gasseri}, volume={161}, ISSN={["1350-0872"]}, DOI={10.1099/mic.0.000129}, journal={MICROBIOLOGY-SGM}, author={Sanozky-Dawes, Rosemary and Selle, Kurt and O'Flaherty, Sarah and Klaenhammer, Todd and Barrangou, Rodolphe}, year={2015}, month={Sep}, pages={1752–1761} }
 @article{lightfoot_selle_yang_goh_sahay_zadeh_owen_colliou_li_johannssen_et al._2015, title={SIGNR3-dependent immune regulation by Lactobacillus acidophilus surface layer protein A in colitis}, volume={34}, ISSN={["1460-2075"]}, DOI={10.15252/embj.201490296}, number={7}, journal={EMBO JOURNAL}, author={Lightfoot, Yaima L. and Selle, Kurt and Yang, Tao and Goh, Yong Jun and Sahay, Bikash and Zadeh, Mojgan and Owen, Jennifer L. and Colliou, Natacha and Li, Eric and Johannssen, Timo and et al.}, year={2015}, month={Apr}, pages={881–895} }
 @article{call_goh_selle_klaenhammer_o'flaherty_2015, title={Sortase-deficient lactobacilli: effect on immunomodulation and gut retention}, volume={161}, ISSN={["1350-0872"]}, DOI={10.1099/mic.0.000007}, journal={MICROBIOLOGY-SGM}, author={Call, Emma K. and Goh, Yong Jun and Selle, Kurt and Klaenhammer, Todd R. and O'Flaherty, Sarah}, year={2015}, month={Feb}, pages={311–321} }
 @article{sanders_klaenhammer_ouwehand_pot_johansen_heimbach_marco_tennila_ross_franz_et al._2014, title={Effects of genetic, processing, or product formulation changes on efficacy and safety of probiotics}, volume={1309}, ISSN={["0077-8923"]}, DOI={10.1111/nyas.12363}, journal={ANNALS REPORTS}, author={Sanders, Mary Ellen and Klaenhammer, Todd R. and Ouwehand, Arthur C. and Pot, Bruno and Johansen, Eric and Heimbach, James T. and Marco, Maria L. and Tennila, Julia and Ross, R. Paul and Franz, Charles and et al.}, year={2014}, pages={1–18} }
 @misc{johnson_klaenhammer_2014, title={Impact of genomics on the field of probiotic research: historical perspectives to modern paradigms}, volume={106}, ISSN={["1572-9699"]}, DOI={10.1007/s10482-014-0171-y}, number={1}, journal={ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY}, author={Johnson, Brant R. and Klaenhammer, Todd R.}, year={2014}, month={Jul}, pages={141–156} }
 @misc{goh_klaenhammer_2014, title={Insights into glycogen metabolism in Lactobacillus acidophilus: impact on carbohydrate metabolism, stress tolerance and gut retention}, volume={13}, ISSN={["1475-2859"]}, DOI={10.1186/s12934-014-0094-3}, journal={MICROBIAL CELL FACTORIES}, author={Goh, Yong Jun and Klaenhammer, Todd R.}, year={2014}, month={Nov} }
 @article{barrangou_klaenhammer_2014, title={Microbiology bacteria get vaccinated}, volume={513}, number={7517}, journal={Nature}, author={Barrangou, R. and Klaenhammer, T. R.}, year={2014}, pages={175–176} }
 @article{moller_goh_viborg_andersen_klaenhammer_svensson_abou hachem_2014, title={Recent insight in alpha-glucan metabolism in probiotic bacteria}, volume={69}, ISSN={["1336-9563"]}, DOI={10.2478/s11756-014-0367-7}, number={6}, journal={BIOLOGIA}, author={Moller, Marie S. and Goh, Yong Jun and Viborg, Alexander H. and Andersen, Joakim M. and Klaenhammer, Todd R. and Svensson, Birte and Abou Hachem, Maher}, year={2014}, month={Jun}, pages={713–721} }
 @article{baugher_durmaz_klaenhammer_2014, title={Spontaneously Induced Prophages in Lactobacillus gasseri Contribute to Horizontal Gene Transfer}, volume={80}, ISSN={["1098-5336"]}, DOI={10.1128/aem.04092-13}, number={11}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Baugher, J. L. and Durmaz, E. and Klaenhammer, T. R.}, year={2014}, month={Jun}, pages={3508–3517} }
 @article{goh_klaenhammer_2013, title={A functional glycogen biosynthesis pathway in Lactobacillus acidophilus: expression and analysis of the glg operon}, volume={89}, ISSN={["1365-2958"]}, DOI={10.1111/mmi.12338}, number={6}, journal={MOLECULAR MICROBIOLOGY}, author={Goh, Yong Jun and Klaenhammer, Todd R.}, year={2013}, month={Sep}, pages={1187–1200} }
 @misc{selle_klaenhammer_2013, title={Genomic and phenotypic evidence for probiotic influences of Lactobacillus gasseri on human health}, volume={37}, ISSN={["1574-6976"]}, DOI={10.1111/1574-6976.12021}, number={6}, journal={FEMS MICROBIOLOGY REVIEWS}, author={Selle, Kurt and Klaenhammer, Todd R.}, year={2013}, month={Nov}, pages={915–935} }
 @article{johnson_selle_o'flaherty_goh_klaenhammer_2013, title={Identification of extracellular surface-layer associated proteins in Lactobacillus acidophilus NCFM}, volume={159}, ISSN={["1350-0872"]}, DOI={10.1099/mic.0.070755-0}, journal={MICROBIOLOGY-SGM}, author={Johnson, Brant and Selle, Kurt and O'Flaherty, Sarah and Goh, Yong Jun and Klaenhammer, Todd}, year={2013}, month={Nov}, pages={2269–2282} }
 @article{savaiano_ritter_klaenhammer_james_longcore_chandler_walker_foyt_2013, title={Improving lactose digestion and symptoms of lactose intolerance with a novel galacto-oligosaccharide (RP-G28): a randomized, double-blind clinical trial}, volume={12}, ISSN={["1475-2891"]}, DOI={10.1186/1475-2891-12-160}, journal={NUTRITION JOURNAL}, author={Savaiano, Dennis A. and Ritter, Andrew J. and Klaenhammer, Todd R. and James, Gareth M. and Longcore, Amy T. and Chandler, Justin R. and Walker, W. Allan and Foyt, Howard L.}, year={2013}, month={Dec} }
 @article{petschow_dore_hibberd_dinan_reid_blaser_cani_degnan_foster_gibson_et al._2013, title={Probiotics, prebiotics, and the host microbiome: the science of translation}, volume={1306}, DOI={10.1111/nyas.12303}, journal={ANNALS REPORTS}, author={Petschow, Bryon and Dore, Joel and Hibberd, Patricia and Dinan, Timothy and Reid, Gregor and Blaser, Martin and Cani, Patrice D. and Degnan, Fred H. and Foster, Jane and Gibson, Glenn and et al.}, year={2013}, pages={1–17} }
 @misc{abou hachem_andersen_barrangou_moller_fredslund_majumder_ejby_lahtinen_jacobsen_lo leggio_et al._2013, title={Recent insight into oligosaccharide uptake and metabolism in probiotic bacteria}, volume={31}, ISSN={["1029-2446"]}, DOI={10.3109/10242422.2013.828048}, number={4}, journal={BIOCATALYSIS AND BIOTRANSFORMATION}, publisher={Informa UK Limited}, author={Abou Hachem, Maher and Andersen, Joakim M. and Barrangou, Rodolphe and Moller, Marie S. and Fredslund, Folmer and Majumder, Avishek and Ejby, Morten and Lahtinen, Sampo J. and Jacobsen, Susanne and Lo Leggio, Leila and et al.}, year={2013}, month={Aug}, pages={226–235} }
 @misc{call_klaenhammer_2013, title={Relevance and application of sortase and sortase-dependent proteins in lactic acid bacteria}, volume={4}, ISSN={["1664-302X"]}, DOI={10.3389/fmicb.2013.00073}, journal={FRONTIERS IN MICROBIOLOGY}, author={Call, Emma K. and Klaenhammer, Todd R.}, year={2013}, month={Apr} }
 @article{andersen_barrangou_abou hachem_lahtinen_goh_svensson_klaenhammer_2013, title={Transcriptional analysis of oligosaccharide utilization by Bifidobacterium lactis Bl-04}, volume={14}, ISSN={["1471-2164"]}, DOI={10.1186/1471-2164-14-312}, number={1}, journal={BMC GENOMICS}, publisher={Springer Nature}, author={Andersen, Joakim M. and Barrangou, Rodolphe and Abou Hachem, Maher and Lahtinen, Sampo J. and Goh, Yong Jun and Svensson, Birte and Klaenhammer, Todd R.}, year={2013}, month={May} }
 @article{khazaie_zadeh_khan_bere_gounari_dennis_blatner_owen_klaenhammer_mohamadzadeh_2012, title={Abating colon cancer polyposis by Lactobacillus acidophilus deficient in lipoteichoic acid}, volume={109}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.1207230109}, number={26}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, author={Khazaie, Khashayarsha and Zadeh, Mojgan and Khan, Mohammad W. and Bere, Praveen and Gounari, Fotini and Dennis, Kirsten and Blatner, Nichole R. and Owen, Jennifer L. and Klaenhammer, Todd R. and Mohamadzadeh, Mansour}, year={2012}, month={Jun}, pages={10462–10467} }
 @article{carroll_ringel-kulka_siddle_klaenhammer_ringel_2012, title={Characterization of the fecal microbiota using high-throughput sequencing reveals a stable microbial community during storage}, volume={7}, DOI={10.1371/journal.pone.0046953}, number={10}, journal={PLoS One}, author={Carroll, I. M. and Ringel-Kulka, T. and Siddle, J. P. and Klaenhammer, T. R. and Ringel, Y.}, year={2012} }
 @article{kajikawa_zhang_long_nordone_stoeker_lavoy_bumgardner_klaenhammer_dean_2012, title={Construction and Immunological Evaluation of Dual Cell Surface Display of HIV-1 Gag and Salmonella enterica Serovar Typhimurium FliC in Lactobacillus acidophilus for Vaccine Delivery}, volume={19}, ISSN={["1556-6811"]}, DOI={10.1128/cvi.00049-12}, number={9}, journal={CLINICAL AND VACCINE IMMUNOLOGY}, author={Kajikawa, Akinobu and Zhang, Lin and Long, Julie and Nordone, Shila and Stoeker, Laura and LaVoy, Alora and Bumgardner, Sara and Klaenhammer, Todd and Dean, Gregg}, year={2012}, month={Sep}, pages={1374–1381} }
 @article{o'flaherty_klaenhammer_2012, title={Influence of Exposure Time on Gene Expression by Human Intestinal Epithelial Cells Exposed to Lactobacillus acidophilus}, volume={78}, ISSN={["0099-2240"]}, DOI={10.1128/aem.00504-12}, number={14}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={O'Flaherty, Sarah and Klaenhammer, Todd R.}, year={2012}, month={Jul}, pages={5028–5032} }
 @article{abou hachem_fredslund_andersen_larsen_majumder_ejby_van zanten_lahtinen_barrangou_klaenhammer_et al._2012, title={Raffinose family oligosaccharide utilisation by probiotic bacteria: insight into substrate recognition, molecular architecture and diversity of GH36 alpha-galactosidases}, volume={30}, ISSN={["1024-2422"]}, DOI={10.3109/10242422.2012.674717}, number={3}, journal={BIOCATALYSIS AND BIOTRANSFORMATION}, author={Abou Hachem, Maher and Fredslund, F. and Andersen, J. M. and Larsen, R. Jonsgaard and Majumder, A. and Ejby, M. and Van Zanten, G. and Lahtinen, S. J. and Barrangou, R. and Klaenhammer, T. and et al.}, year={2012}, month={May}, pages={316–325} }
 @article{klaenhammer_kleerebezem_kopp_rescigno_2012, title={The impact of probiotics and prebiotics on the immune system}, volume={12}, ISSN={["1474-1741"]}, DOI={10.1038/nri3312}, number={10}, journal={NATURE REVIEWS IMMUNOLOGY}, author={Klaenhammer, Todd R. and Kleerebezem, Michiel and Kopp, Matthias Volkmar and Rescigno, Maria}, year={2012}, month={Oct}, pages={728–734} }
 @article{andersen_barrangou_abou hachem_lahtinen_goh_svensson_klaenhammer_2012, title={Transcriptional Analysis of Prebiotic Uptake and Catabolism by Lactobacillus acidophilus NCFM}, volume={7}, ISSN={["1932-6203"]}, DOI={10.1371/journal.pone.0044409}, number={9}, journal={PLOS ONE}, publisher={Public Library of Science (PLoS)}, author={Andersen, Joakim Mark and Barrangou, Rodolphe and Abou Hachem, Maher and Lahtinen, Sampo J. and Goh, Yong-Jun and Svensson, Birte and Klaenhammer, Todd R.}, editor={Gibas, CynthiaEditor}, year={2012}, month={Sep} }
 @article{gordon_klaenhammer_2011, title={A rendezvous with our microbes}, volume={108}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.1101958108}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, author={Gordon, Jeffrey I. and Klaenhammer, Todd R.}, year={2011}, month={Mar}, pages={4513–4515} }
 @article{stoeker_nordone_gunderson_zhang_kajikawa_lavoy_miller_klaenhammer_dean_2011, title={Assessment of Lactobacillus gasseri as a Candidate Oral Vaccine Vector}, volume={18}, ISSN={["1556-6811"]}, DOI={10.1128/cvi.05277-11}, number={11}, journal={CLINICAL AND VACCINE IMMUNOLOGY}, author={Stoeker, Laura and Nordone, Shila and Gunderson, Sara and Zhang, Lin and Kajikawa, Akinobu and LaVoy, Alora and Miller, Michael and Klaenhammer, Todd R. and Dean, Gregg A.}, year={2011}, month={Nov}, pages={1834–1844} }
 @article{douglas_klaenhammer_2011, title={Directed Chromosomal Integration and Expression of the Reporter Gene gusA3 in Lactobacillus acidophilus NCFM}, volume={77}, ISSN={["0099-2240"]}, DOI={10.1128/aem.06028-11}, number={20}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Douglas, Grace L. and Klaenhammer, Todd R.}, year={2011}, month={Oct}, pages={7365–7371} }
 @article{kajikawa_nordone_zhang_stoeker_lavoy_klaenhammer_dean_2011, title={Dissimilar Properties of Two Recombinant Lactobacillus acidophilus Strains Displaying Salmonella FliC with Different Anchoring Motifs}, volume={77}, ISSN={["0099-2240"]}, DOI={10.1128/aem.05153-11}, number={18}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Kajikawa, Akinobu and Nordone, Shila K. and Zhang, Lin and Stoeker, Laura L. and LaVoy, Alora S. and Klaenhammer, Todd R. and Dean, Gregg A.}, year={2011}, month={Sep}, pages={6587–6596} }
 @article{altermann_klaenhammer_2011, title={Group-specific comparison of four lactobacilli isolated from human sources using differential blast analysis}, volume={6}, ISSN={["1555-8932"]}, DOI={10.1007/s12263-010-0191-9}, number={3}, journal={GENES AND NUTRITION}, author={Altermann, Eric and Klaenhammer, Todd R.}, year={2011}, month={Aug}, pages={319–340} }
 @misc{baugher_klaenhammer_2011, title={Invited review: Application of omics tools to understanding probiotic functionality}, volume={94}, ISSN={["1525-3198"]}, DOI={10.3168/jds.2011-4384}, number={10}, journal={JOURNAL OF DAIRY SCIENCE}, author={Baugher, J. L. and Klaenhammer, T. R.}, year={2011}, month={Oct}, pages={4753–4765} }
 @misc{guarner_sanders_gibson_klaenhammer_cabana_scott_reid_delzenne_fahey_hill_2011, title={Probiotic and prebiotic claims in Europe: seeking a clear roadmap}, volume={106}, ISSN={["1475-2662"]}, DOI={10.1017/s0007114511002248}, number={11}, journal={BRITISH JOURNAL OF NUTRITION}, author={Guarner, Francisco and Sanders, Mary Ellen and Gibson, Glenn and Klaenhammer, Todd and Cabana, Michael and Scott, Karen and Reid, Gregor and Delzenne, Nathalie M. and Fahey, George C., Jr. and Hill, Colin}, year={2011}, month={Dec}, pages={1765–1767} }
 @article{mohamadzadeh_pfeiler_brown_zadeh_gramarossa_managlia_bere_sarraj_khan_pakanati_et al._2011, title={Regulation of induced colonic inflammation by Lactobacillus acidophilus deficient in lipoteichoic acid}, volume={108}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.1005066107}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, author={Mohamadzadeh, Mansour and Pfeiler, Erika A. and Brown, Jeffrey B. and Zadeh, Mojgan and Gramarossa, Matthew and Managlia, Elizabeth and Bere, Praveen and Sarraj, Bara and Khan, Mohammad W. and Pakanati, Krishna Chaitanya and et al.}, year={2011}, month={Mar}, pages={4623–4630} }
 @article{o'flaherty_klaenhammer_2011, title={The Impact of Omic Technologies on the Study of Food Microbes}, volume={2}, ISBN={["978-0-8243-4902-8"]}, ISSN={["1941-1421"]}, DOI={10.1146/annurev-food-030810-110338}, journal={ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 2}, author={O'Flaherty, Sarah and Klaenhammer, Todd R.}, year={2011}, pages={353–371} }
 @article{andersen_barrangou_abou hachem_lahtinen_goh_svensson_klaenhammer_2011, title={Transcriptional and functional analysis of galactooligosaccharide uptake by lacS in Lactobacillus acidophilus}, volume={108}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.1114152108}, number={43}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, publisher={Proceedings of the National Academy of Sciences}, author={Andersen, Joakim M. and Barrangou, Rodolphe and Abou Hachem, Maher and Lahtinen, Sampo and Goh, Yong Jun and Svensson, Birte and Klaenhammer, Todd R.}, year={2011}, month={Oct}, pages={17785–17790} }
 @article{duong_miller_barrangou_azcarate-peril_klaenhammer_2010, title={Construction of vectors for inducible and constitutive gene expression in Lactobacillus}, volume={4}, DOI={10.1111/j.1751-7915.2010.00200.x}, number={3}, journal={Microbial Biotechnology}, publisher={Wiley-Blackwell}, author={Duong, Tri and Miller, Michael J. and Barrangou, Rodolphe and Azcarate-Peril, M. Andrea and Klaenhammer, Todd R.}, year={2010}, month={Sep}, pages={357–367} }
 @article{goh_klaenhammer_2010, title={Functional Roles of Aggregation-Promoting-Like Factor in Stress Tolerance and Adherence of Lactobacillus acidophilus NCFM}, volume={76}, ISSN={["1098-5336"]}, DOI={10.1128/aem.00030-10}, number={15}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Goh, Yong Jun and Klaenhammer, Todd R.}, year={2010}, month={Aug}, pages={5005–5012} }
 @article{sarah j. o'flaherty_klaenhammer_2010, title={Functional and phenotypic characterization of a protein from Lactobacillus acidophilus involved in cell morphology, stress tolerance and adherence to intestinal cells}, volume={156}, ISSN={["1465-2080"]}, DOI={10.1099/mic.0.043158-0}, journal={MICROBIOLOGY-SGM}, author={Sarah J. O'Flaherty and Klaenhammer, Todd R.}, year={2010}, month={Nov}, pages={3360–3367} }
 @article{douglas_klaenhammer_2010, title={Genomic Evolution of Domesticated Microorganisms}, volume={1}, ISBN={["978-0-8243-4901-1"]}, ISSN={["1941-1413"]}, DOI={10.1146/annurev.food.102308.124134}, journal={ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 1}, author={Douglas, Grace L. and Klaenhammer, Todd R.}, year={2010}, pages={397–414} }
 @article{damelin_mavri-damelin_klaenhammer_tiemessen_2010, title={Plasmid Transduction Using Bacteriophage Phi adh for Expression of CC Chemokines by Lactobacillus gasseri ADH}, volume={76}, ISSN={["1098-5336"]}, DOI={10.1128/aem.00139-10}, number={12}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Damelin, Leonard H. and Mavri-Damelin, Demetra and Klaenhammer, Todd R. and Tiemessen, Caroline T.}, year={2010}, month={Jun}, pages={3878–3885} }
 @article{mohamadzadeh_durmaz_zadeh_pakanati_gramarossa_cohran_klaenhammer_2010, title={Targeted expression of anthrax protective antigen by Lactobacillus gasseri as an anthrax vaccine}, volume={5}, ISSN={["1746-0921"]}, DOI={10.2217/fmb.10.78}, number={8}, journal={FUTURE MICROBIOLOGY}, author={Mohamadzadeh, Mansour and Durmaz, Evelyn and Zadeh, Mojgan and Pakanati, Krishna Chaitanya and Gramarossa, Matthew and Cohran, Valeria and Klaenhammer, Todd R.}, year={2010}, month={Aug}, pages={1289–1296} }
 @article{o'flaherty_klaenhammer_2010, title={The role and potential of probiotic bacteria in the gut, and the communication between gut microflora and gut/host}, volume={20}, ISSN={["1879-0143"]}, DOI={10.1016/j.idairyj.2009.11.011}, number={4}, journal={INTERNATIONAL DAIRY JOURNAL}, author={O'Flaherty, Sarah and Klaenhammer, Todd R.}, year={2010}, month={Apr}, pages={262–268} }
 @misc{barrangou_azcarate-peril_altermann_duong_klaenhammer_2009, title={Compositions comprising promoter sequences and methods of use}, volume={7,495,092}, number={2009 Feb. 24}, author={Barrangou, R. and Azcarate-Peril, A. and Altermann, E. and Duong, T. and Klaenhammer, T. R.}, year={2009} }
 @article{mohamadzadeh_duong_sandwick_hoover_klaenhammer_2009, title={Dendritic cell targeting of Bacillus anthracis protective antigen expressed by Lactobacillus acidophilus protects mice from lethal challenge}, volume={106}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.0900029106}, number={11}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, author={Mohamadzadeh, M. and Duong, T. and Sandwick, S. J. and Hoover, T. and Klaenhammer, T. R.}, year={2009}, month={Mar}, pages={4331–4336} }
 @article{goh_azcarate-peril_o'flaherty_durmaz_valence_jardin_lortal_klaenhammer_2009, title={Development and Application of a upp-Based Counterselective Gene Replacement System for the Study of the S-Layer Protein SlpX of Lactobacillus acidophilus NCFM}, volume={75}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.02502-08}, number={10}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Goh, Yong Jun and Azcarate-Peril, M. Andrea and O'Flaherty, Sarah and Durmaz, Evelyn and Valence, Florence and Jardin, Julien and Lortal, Sylvie and Klaenhammer, Todd R.}, year={2009}, month={May}, pages={3093–3105} }
 @misc{ventura_o'flaherty_claesson_turroni_klaenhammer_sinderen_paul w. o'toole_2009, title={Genome-scale analyses of health-promoting bacteria: probiogenomics}, volume={7}, ISSN={["1740-1534"]}, DOI={10.1038/nrmicro2047}, number={1}, journal={NATURE REVIEWS MICROBIOLOGY}, author={Ventura, Marco and O'Flaherty, Sarah and Claesson, Marcus J. and Turroni, Francesca and Klaenhammer, Todd R. and Sinderen, Douwe and Paul W. O'Toole}, year={2009}, month={Jan}, pages={61–U77} }
 @misc{goh_klaenhammer_2009, title={Genomic features of Lactobacillus species}, volume={14}, journal={Frontiers in Bioscience}, author={Goh, Y. J. and Klaenhammer, T. R.}, year={2009}, pages={1362–1386} }
 @misc{schroeter_klaenhammer_2009, title={Genomics of lactic acid bacteria}, volume={292}, ISSN={["1574-6968"]}, DOI={10.1111/j.1574-6968.2008.01442.x}, number={1}, journal={FEMS MICROBIOLOGY LETTERS}, author={Schroeter, Joel and Klaenhammer, Todd}, year={2009}, month={Mar}, pages={1–6} }
 @article{gunderson_nordone_lavoy_zhang_klaenhammer_dean_2009, title={Immunogenicity of Lactobacillus gasseri-FliC as an oral mucosal vaccine adjuvant for HIV}, volume={6}, ISSN={["1742-4690"]}, DOI={10.1186/1742-4690-6-s3-p163}, journal={RETROVIROLOGY}, author={Gunderson, S. and Nordone, S. and LaVoy, A. and Zhang, L. and Klaenhammer, T. and Dean, G.}, year={2009} }
 @misc{klaenhammer_russell_altermann_buck_2009, title={Lactobacillus acidophillus nucleic acid sequences encoding cell surface protein homologues and uses therefore}, volume={7,538,209}, number={2009 May 26}, author={Klaenhammer, T. R. and Russell, W. M. and Altermann, E. and Buck, B. L.}, year={2009} }
 @misc{klaenhammer_altermann_azcarate-peril_mcauliffe_russell_2009, title={Lactobacillus acidophilus nucleic acid sequences encoding stress-related proteins and uses therefor}, volume={7,608,700}, number={1999 Oct. 27}, author={Klaenhammer, T. R. and Altermann, E. and Azcarate-Peril, M. A. and McAuliffe, O. and Russell, W. M.}, year={2009} }
 @misc{klaenhammer_russell_altermann_azcarate-peril_2009, title={Nucleic acid sequences encoding two-component sensing and regulatory proteins, antimicrobial proteins and uses therefor}, volume={7,550,576}, number={2009 Jun 23}, author={Klaenhammer, T. R. and Russell, W. M. and Altermann, E. and Azcarate-Peril, A.}, year={2009} }
 @article{engelbrektson_korzenik_pittler_sanders_klaenhammer_leyer_kitts_2009, title={Probiotics to minimize the disruption of faecal microbiota in healthy subjects undergoing antibiotic therapy}, volume={58}, ISSN={["1473-5644"]}, DOI={10.1099/jmm.0.47615-0}, number={5}, journal={JOURNAL OF MEDICAL MICROBIOLOGY}, author={Engelbrektson, Anna and Korzenik, Joshua R. and Pittler, Arlyn and Sanders, Mary E. and Klaenhammer, Todd R. and Leyer, Gregory and Kitts, Christopher L.}, year={2009}, month={May}, pages={663–670} }
 @article{pfeiler_klaenhammer_2009, title={Role of Transporter Proteins in Bile Tolerance of Lactobacillus acidophilus}, volume={75}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.00495-09}, number={18}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Pfeiler, Erika A. and Klaenhammer, Todd R.}, year={2009}, month={Sep}, pages={6013–6016} }
 @article{buck_azcarate-peril_klaenhammer_2009, title={Role of autoinducer-2 on the adhesion ability of Lactobacillus acidophilus}, volume={107}, ISSN={["1365-2672"]}, DOI={10.1111/j.1365-2672.2009.04204.x}, number={1}, journal={JOURNAL OF APPLIED MICROBIOLOGY}, author={Buck, B. L. and Azcarate-Peril, M. A. and Klaenhammer, T. R.}, year={2009}, month={Jul}, pages={269–279} }
 @article{azcarate-peril_tallon_klaenhammer_2009, title={Temporal gene expression and probiotic attributes of Lactobacillus acidophilus during growth in milk}, volume={92}, ISSN={["1525-3198"]}, DOI={10.3168/jds.2008-1457}, number={3}, journal={JOURNAL OF DAIRY SCIENCE}, author={Azcarate-Peril, M. A. and Tallon, R. and Klaenhammer, T. R.}, year={2009}, month={Mar}, pages={870–886} }
 @article{stoeker_nordone_lavoy_tallon_klaenhammer_dean_2009, title={Toll-like receptor activation profiles of wild-type, recombinant, and mutant Lactobacillus: implications for vaccine design}, volume={6}, ISSN={["1742-4690"]}, DOI={10.1186/1742-4690-6-s3-p133}, journal={RETROVIROLOGY}, author={Stoeker, L. and Nordone, S. and LaVoy, A. and Tallon, R. and Klaenhammer, T. and Dean, G.}, year={2009} }
 @article{azcarate-peril_altermann_goh_tallon_sanozky-dawes_pfeiler_o'flaherty_buck_dobson_duong_et al._2008, title={Analysis of the genome sequence of Lactobacillus gasseri ATCC 33323 reveals the molecular basis of an autochthonous intestinal organism}, volume={74}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.00054-08}, number={15}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, publisher={American Society for Microbiology}, author={Azcarate-Peril, M. Andrea and Altermann, Eric and Goh, Yong Jun and Tallon, Richard and Sanozky-Dawes, Rosemary B. and Pfeiler, Erika A. and O'Flaherty, Sarah and Buck, B. Logan and Dobson, Alleson and Duong, Tri and et al.}, year={2008}, month={Aug}, pages={4610–4625} }
 @article{klaenhammer_altermann_pfeiler_buck_goh_o'flaherty_barrangou_duong_2008, title={Functional genomics of probiotic Lactobacilli}, volume={42}, ISSN={["0192-0790"]}, DOI={10.1097/MCG.0b013e31817da140}, number={8}, journal={JOURNAL OF CLINICAL GASTROENTEROLOGY}, publisher={Ovid Technologies (Wolters Kluwer Health)}, author={Klaenhammer, Todd R. and Altermann, Eric and Pfeiler, Erika and Buck, Brock Logan and Goh, Yong-Jun and O'Flaherty, Sarah and Barrangou, Rodolphe and Duong, Tri}, year={2008}, month={Sep}, pages={S160–S162} }
 @article{durmaz_miller_azcarate-peril_toon_klaenhammer_2008, title={Genome sequence and characteristics of Lrm1, a prophage from industrial Lactobacillus rhamnosus strain M1}, volume={74}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.00010-08}, number={15}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Durmaz, Evelyn and Miller, Michael J. and Azcarate-Peril, M. Andrea and Toon, Stephen P. and Klaenhammer, Todd R.}, year={2008}, month={Aug}, pages={4601–4609} }
 @misc{klaenhammer_altermann_barrangou_russell_duong_2008, title={Lactobacillus acidophilus nucleic acid sequences encoding carbohydrate utilization-related proteins and uses therefor}, volume={7,459,289}, number={2008 Dec. 2}, author={Klaenhammer, T. R. and Altermann, E. and Barrangou, R. and Russell, W. M. and Duong, T.}, year={2008} }
 @misc{klaenhammer_altermann_buck_russell_2008, title={Lactobacillus acidophilus nucleic acid sequences encoding cell surface protein homologues and uses therefore}, volume={7,348,420}, number={2008 Mar. 25}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Klaenhammer, T. R. and Altermann, E. and Buck, B. L. and Russell, W. M.}, year={2008} }
 @misc{klaenhammer_altermann_russell_2008, title={Lactobacillus acidophilus nucleic acid sequences encoding protease homologues and uses therefore}, volume={7,455,992}, number={2008 Nov. 25}, author={Klaenhammer, T. R. and Altermann, E. and Russell, W. M.}, year={2008} }
 @misc{klaenhammer_azcarate-peril_altermann_2008, title={Lactobacillus acidophilus nucleic acids and uses thereof}, volume={7,468,182}, number={2008 Dec. 23}, author={Klaenhammer, T. and Azcarate-Peril, A. and Altermann, E.}, year={2008} }
 @article{konstantinov_smidt_vos_bruijns_singh_valence_molle_lortal_altermann_klaenhammer_et al._2008, title={S layer protein A of Lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions}, volume={105}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.0810305105}, number={49}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, author={Konstantinov, Sergey R. and Smidt, Hauke and Vos, Willem M. and Bruijns, Sven C. M. and Singh, Satwinder Kaur and Valence, Florence and Molle, Daniel and Lortal, Sylvie and Altermann, Eric and Klaenhammer, Todd R. and et al.}, year={2008}, month={Dec}, pages={19474–19479} }
 @article{mohamadzadeh_klaenhammer_2008, title={Specific Lactobacillus species differentially activate Toll-like receptors and downstream signals in dendritic cells}, volume={7}, ISSN={["1744-8395"]}, DOI={10.1586/14760584.7.8.1155}, number={8}, journal={EXPERT REVIEW OF VACCINES}, author={Mohamadzadeh, Mansour and Klaenhammer, Todd R.}, year={2008}, month={Oct}, pages={1155–1164} }
 @misc{mohamadzadeh_duong_hoover_klaenhammer_2008, title={Targeting mucosal dendritic cells with microbial antigens from probiotic lactic acid bacteria}, volume={7}, ISSN={["1744-8395"]}, DOI={10.1586/14760584.7.2.163}, number={2}, journal={EXPERT REVIEW OF VACCINES}, author={Mohamadzadeh, Mansour and Duong, Tri and Hoover, Timothy and Klaenhammer, Todd R.}, year={2008}, month={Mar}, pages={163–174} }
 @misc{durmaz_klaenhammer_2007, title={AbiZ phage resistance gene}, volume={7,169,911}, number={2007 Jan. 30}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Durmaz, E. and Klaenhammer, T. R.}, year={2007} }
 @article{durmaz_klaenhammer_2007, title={Abortive phage resistance mechanism AbiZ speeds the lysis clock to cause premature lysis of phage-infected Lactococcus lactis}, volume={189}, ISSN={["1098-5530"]}, DOI={10.1128/JB.00904-06}, number={4}, journal={JOURNAL OF BACTERIOLOGY}, author={Durmaz, Evelyn and Klaenhammer, Todd R.}, year={2007}, month={Feb}, pages={1417–1425} }
 @article{carroll_andrus_bruno-barcena_klaenhammer_hassan_threadgill_2007, title={Anti-inflammatory properties of Lactobacillus gasseri expressing manganese superoxide dismutase using the interleukin 10-deficient mouse model of colitis}, volume={293}, ISSN={["1522-1547"]}, url={http://europepmc.org/abstract/med/17640978}, DOI={10.1152/ajpgi.00132.2007}, number={4}, journal={AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY}, author={Carroll, Ian M. and Andrus, Jason M. and Bruno-Barcena, Jose M. and Klaenhammer, Todd R. and Hassan, Hosni M. and Threadgill, Deborah S.}, year={2007}, month={Oct}, pages={G729–G738} }
 @article{pfeiler_azcarate-peril_klaenhammer_2007, title={Characterization of a novel bile-inducible operon encoding a two-component regulatory system in Lactobacillus acidophilus}, volume={189}, ISSN={["1098-5530"]}, DOI={10.1128/JB.00337-07}, number={13}, journal={JOURNAL OF BACTERIOLOGY}, author={Pfeiler, Erika A. and Azcarate-Peril, M. Andrea and Klaenhammer, Todd R.}, year={2007}, month={Jul}, pages={4624–4634} }
 @article{dobson_sanozky-dawes_klaenhammer_2007, title={Identification of an operon and inducing peptide involved in the production of lactacin B by Lactobacillus acidophilus}, volume={103}, ISSN={["1365-2672"]}, DOI={10.1111/j.1365-2672.2007.03417.x}, number={5}, journal={JOURNAL OF APPLIED MICROBIOLOGY}, author={Dobson, A. E. and Sanozky-Dawes, R. B. and Klaenhammer, T. R.}, year={2007}, month={Nov}, pages={1766–1778} }
 @article{klaenhammer_azcarate-peril_altermann_barrangou_2007, title={Influence of the dairy environment on gene expression and substrate(1-3)}, volume={137}, ISSN={["0022-3166"]}, DOI={10.1093/jn/137.3.748s}, number={3}, journal={JOURNAL OF NUTRITION}, author={Klaenhammer, Todd R. and Azcarate-Peril, M. Andrea and Altermann, Eric and Barrangou, Rodolphe}, year={2007}, month={Mar}, pages={748S–750S} }
 @article{sturino_klaenhammer_2007, title={Inhibition of bacteriophage replication in Streptococcus thermophilus by subunit poisoning of primase}, volume={153}, ISSN={["1350-0872"]}, DOI={10.1099/mic.0.2007/007567-0}, journal={MICROBIOLOGY-SGM}, author={Sturino, Joseph M. and Klaenhammer, Todd R.}, year={2007}, month={Oct}, pages={3295–3302} }
 @article{callanan_russell_klaenhammer_2007, title={Modification of Lactobacillus beta-glucuronidase activity by random mutagenesis}, volume={389}, ISSN={["0378-1119"]}, DOI={10.1016/j.gene.2006.10.022}, number={2}, journal={GENE}, author={Callanan, Michael J. and Russell, William M. and Klaenhammer, Todd R.}, year={2007}, month={Mar}, pages={122–127} }
 @misc{pfeiler_klaenhammer_2007, title={The genomics of lactic acid bacteria}, volume={15}, ISSN={["1878-4380"]}, DOI={10.1016/j.tim.2007.09.010}, number={12}, journal={TRENDS IN MICROBIOLOGY}, author={Pfeiler, Erika A. and Klaenhammer, Todd R.}, year={2007}, month={Dec}, pages={546–553} }
 @article{engelbrektson_korzenik_sanders_clement_leyer_klaenhammer_kitts_2006, title={Analysis of treatment effects on the microbial ecology of the human intestine}, volume={57}, ISSN={["0168-6496"]}, DOI={10.1111/j.1574-6941.2006.00112.x}, number={2}, journal={FEMS MICROBIOLOGY ECOLOGY}, author={Engelbrektson, Anna L. and Korzenik, Joshua R. and Sanders, Mary Ellen and Clement, Brian G. and Leyer, Gregory and Klaenhammer, Todd R. and Kitts, Christopher L.}, year={2006}, month={Aug}, pages={239–250} }
 @article{duong_barrangou_russell_klaenhammer_2006, title={Characterization of the tre locus and analysis of trehalose cryoprotection in Lactobacillus acidophilus NCFM}, volume={72}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.72.2.1218-1225.2006}, number={2}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, publisher={American Society for Microbiology}, author={Duong, T and Barrangou, R and Russell, WM and Klaenhammer, TR}, year={2006}, month={Feb}, pages={1218–1225} }
 @article{ventura_canchaya_bernini_altermann_barrangou_mcgrath_claesson_li_leahy_walker_et al._2006, title={Comparative genomics and transcriptional analysis of prophages identified in the Genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei}, volume={72}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.72.5.3130-3146.2006}, number={5}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, publisher={American Society for Microbiology}, author={Ventura, Marco and Canchaya, Carlos and Bernini, Valentina and Altermann, Eric and Barrangou, Rodolphe and McGrath, Stephen and Claesson, Marcus J. and Li, Yin and Leahy, Sinead and Walker, Carey D. and et al.}, year={2006}, month={May}, pages={3130–3146} }
 @article{makarova_slesarev_wolf_sorokin_mirkin_koonin_pavlov_pavlova_karamychev_polouchine_et al._2006, title={Comparative genomics of the lactic acid bacteria}, volume={103}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.0607117103}, number={42}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, publisher={Proceedings of the National Academy of Sciences}, author={Makarova, K. and Slesarev, A. and Wolf, Y. and Sorokin, A. and Mirkin, B. and Koonin, E. and Pavlov, A. and Pavlova, N. and Karamychev, V. and Polouchine, N. and et al.}, year={2006}, month={Oct}, pages={15611–15616} }
 @misc{sturino_klaenhammer_2006, title={Engineered bacteriophage-defence systems in bioprocessing}, volume={4}, ISSN={["1740-1534"]}, DOI={10.1038/nrmicro1393}, number={5}, journal={NATURE REVIEWS MICROBIOLOGY}, author={Sturino, JM and Klaenhammer, TR}, year={2006}, month={May}, pages={395–404} }
 @article{barrangou_azcarate-peril_duong_conners_kelly_klaenhammer_2006, title={Global analysis of carbohydrate utilization by Lactobacillus acidophilus using cDNA microarrays}, volume={103}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.0511287103}, number={10}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, publisher={Proceedings of the National Academy of Sciences}, author={Barrangou, R and Azcarate-Peril, MA and Duong, T and Conners, SB and Kelly, RM and Klaenhammer, TR}, year={2006}, month={Mar}, pages={3816–3821} }
 @article{azcarate-peril_bruno-barcena_hassan_klaenhammer_2006, title={Transcriptional and functional analysis of oxalyl-coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes from Lactobacillus acidophilus}, volume={72}, ISSN={["1098-5336"]}, url={http://europepmc.org/abstract/med/16517636}, DOI={10.1128/AEM.72.3.1891-1899.2006}, number={3}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Azcarate-Peril, MA and Bruno-Barcena, JM and Hassan, HM and Klaenhammer, TR}, year={2006}, month={Mar}, pages={1891–1899} }
 @article{altermann_russell_azcarate-peril_barrangou_buck_mcauliffe_souther_dobson_duong_callanan_et al._2005, title={Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM}, volume={102}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.0409188102}, number={11}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, publisher={Proceedings of the National Academy of Sciences}, author={Altermann, E and Russell, WM and Azcarate-Peril, MA and Barrangou, R and Buck, BL and McAuliffe, O and Souther, N and Dobson, A and Duong, T and Callanan, M and et al.}, year={2005}, month={Mar}, pages={3906–3912} }
 @article{buck_altermann_svingerud_klaenhammer_2005, title={Functional analysis of putative adhesion factors in Lactobacillus acidophilus NCFM}, volume={71}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.71.12.8344-8351.2005}, number={12}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Buck, BL and Altermann, E and Svingerud, T and Klaenhammer, TR}, year={2005}, month={Dec}, pages={8344–8351} }
 @article{mcauliffe_cano_klaenhammer_2005, title={Genetic analysis of two bile salt hydrolase activities in Lactobacillus acidophilus NCFM}, volume={71}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.71.8.4925-4929.2005}, number={8}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={McAuliffe, O and Cano, RJ and Klaenhammer, TR}, year={2005}, month={Aug}, pages={4925–4929} }
 @article{klaenhammer_peril_barrangou_duong_altermann_2005, title={Genomic Perspectives on Probiotic Lactic Acid Bacteria}, volume={24}, ISBN={1342-1441}, DOI={10.12938/bifidus.24.31}, number={2}, journal={Bioscience and Microflora}, publisher={BMFH Press}, author={Klaenhammer, Todd R. and Peril, Andrea Azcarate and Barrangou, Rodolphe and Duong, Tri and Altermann, Eric}, year={2005}, pages={31–33} }
 @misc{klaenhammer_barrangou_buck_azcarate-peril_altermann_2005, title={Genomic features of lactic acid bacteria effecting bioprocessing and health}, volume={29}, ISSN={["1574-6976"]}, DOI={10.1016/j.femsre.2005.04.007}, number={3}, journal={FEMS MICROBIOLOGY REVIEWS}, publisher={Wiley-Blackwell}, author={Klaenhammer, TR and Barrangou, R and Buck, BL and Azcarate-Peril, MA and Altermann, E}, year={2005}, month={Aug}, pages={393–409} }
 @article{mohamadzadeh_olson_kalina_ruthel_demmin_warfield_bavari_klaenhammer_2005, title={Lactobacilli activate human dendritic cells that skew T cells toward T helper 1 polarization}, volume={102}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.0500098102}, number={8}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, author={Mohamadzadeh, M and Olson, S and Kalina, WV and Ruthel, G and Demmin, GL and Warfield, KL and Bavari, S and Klaenhammer, TR}, year={2005}, month={Feb}, pages={2880–2885} }
 @article{bruno-barcena_azcarate-peril_klaenhammer_hassan_2005, title={Marker-free chromosomal integration of the manganese superoxide dismutase gene (sodA) from Streptococcus thermophilus into Lactobacillus gasseri}, volume={246}, ISSN={["1574-6968"]}, url={http://europepmc.org/abstract/med/15869967}, DOI={10.1016/j.femsle.2005.03.044}, number={1}, journal={FEMS MICROBIOLOGY LETTERS}, author={Bruno-Barcena, JM and Azcarate-Peril, MA and Klaenhammer, TR and Hassan, HM}, year={2005}, month={May}, pages={91–101} }
 @article{azcarate-peril_mcauliffe_altermann_lick_russell_klaenhammer_2005, title={Microarray analysis of a two-component regulatory system involved in acid resistance and proteolytic activity in Lactobacillus acidophilus}, volume={71}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.71.10.5794-5804.2005}, number={10}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Azcarate-Peril, MA and McAuliffe, O and Altermann, E and Lick, S and Russell, WM and Klaenhammer, TR}, year={2005}, month={Oct}, pages={5794–5804} }
 @misc{rastall_gibson_gill_guarner_klaenhammer_pot_reid_rowland_sanders_2005, title={Modulation of the microbial ecology of the human colon by probiotics, prebiotics and synbiotics to enhance human health: An overview of enabling science and potential applications}, volume={52}, ISSN={["1574-6941"]}, DOI={10.1016/j.femsec.2005.01.003}, number={2}, journal={FEMS MICROBIOLOGY ECOLOGY}, author={Rastall, RA and Gibson, GR and Gill, HS and Guarner, F and Klaenhammer, TR and Pot, B and Reid, G and Rowland, IR and Sanders, ME}, year={2005}, month={Apr}, pages={145–152} }
 @article{altermann_klaenhammer_2005, title={PathwayVoyager: pathway mapping using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database}, volume={6}, journal={BMC Genomics}, author={Altermann, E. and Klaenhammer, T. R.}, year={2005} }
 @article{lu_altermann_breidt_predki_fleming_klaenhammer_2005, title={Sequence analysis of the Lactobacillus plantarum bacteriophage Phi JL-1}, volume={348}, ISSN={["1879-0038"]}, DOI={10.1016/j.gene.2004.12.052}, journal={GENE}, author={Lu, Z and Altermann, E and Breidt, F and Predki, P and Fleming, HP and Klaenhammer, TR}, year={2005}, month={Mar}, pages={45–54} }
 @misc{sturino_klaenhammer_2004, title={Antisense RNA expression strategies effective against Streptococcus thermophilus bacteriophages}, volume={6,686,192}, number={2004 Feb. 3}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Sturino, J. M. and Klaenhammer, T. R.}, year={2004} }
 @article{sturino_klaenhammer_2004, title={Antisense RNA targeting of primase interferes with bacteriophage replication in Streptococcus thermophilus}, volume={70}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.70.3.1735-1743.2004}, number={3}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Sturino, JM and Klaenhammer, TR}, year={2004}, month={Mar}, pages={1735–1743} }
 @misc{sturino_klaenhammer_2004, title={Bacteriophage defense systems and strategies for lactic acid bacteria}, volume={56}, ISBN={["0-12-002658-9"]}, ISSN={["0065-2164"]}, DOI={10.1016/S0065-2164(04)56011-2}, journal={ADVANCES IN APPLIED MICROBIOLOGY, VOL 56}, author={Sturino, JM and Klaenhammer, TR}, year={2004}, pages={331-+} }
 @article{majhenic_venema_allison_matijasic_rogelj_klaenhammer_2004, title={DNA analysis of the genes encoding acidocin LF221 A and acidocin LF221 B, two bacteriocins produced by Lactobacillus gasseri LF221}, volume={63}, ISSN={["1432-0614"]}, DOI={10.1007/s00253-003-1424-2}, number={6}, journal={APPLIED MICROBIOLOGY AND BIOTECHNOLOGY}, author={Majhenic, AC and Venema, K and Allison, GE and Matijasic, BB and Rogelj, I and Klaenhammer, TR}, year={2004}, month={Feb}, pages={705–714} }
 @article{yildirim_lin_hitchins_jaykus_altermann_klaenhammer_kathariou_2004, title={Epidemic clone I-specific genetic markers in strains of Listeria monocytogenes serotype 4b from foods}, volume={70}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.70.7.4158-4164.2004}, number={7}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Yildirim, S and Lin, W and Hitchins, AD and Jaykus, LA and Altermann, E and Klaenhammer, TR and Kathariou, S}, year={2004}, month={Jul}, pages={4158–4164} }
 @article{yildirim_lin_hitchins_jaykus_altermann_klaenhammer_kathariou_2004, title={Epidemic clone I-specific genetic markers in strains of Listeria monocytogenes serotype 4b from foods (vol 70, pg 4158, 2004)}, volume={70}, ISSN={["0099-2240"]}, DOI={10.1128/aem.70.12.7581.2004}, number={12}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Yildirim, S and Lin, W and Hitchins, AD and Jaykus, LA and Altermann, E and Klaenhammer, TR and Kathariou, S}, year={2004}, month={Dec}, pages={7581–7581} }
 @article{bruno-barcena_andrus_libby_klaenhammer_hassan_2004, title={Expression of a heterologous manganese superoxide dismutase gene in intestinal lactobacilli provides protection against hydrogen peroxide toxicity}, volume={70}, ISSN={["1098-5336"]}, url={http://europepmc.org/abstract/med/15294805}, DOI={10.1128/AEM.70.8.4702-4710.2004}, number={8}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Bruno-Barcena, JM and Andrus, JM and Libby, SL and Klaenhammer, TR and Hassan, HM}, year={2004}, month={Aug}, pages={4702–4710} }
 @article{evans_swaminathan_graves_altermann_klaenhammer_fink_kernodle_kathariou_2004, title={Genetic markers unique to Listeria monocytogenes serotype 4b differentiate epidemic clone II (hot dog outbreak strains) from other lineages}, volume={70}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.70.4.2383-2390.2004}, number={4}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Evans, MR and Swaminathan, B and Graves, LM and Altermann, E and Klaenhammer, TR and Fink, RC and Kernodle, S and Kathariou, S}, year={2004}, month={Apr}, pages={2383–2390} }
 @article{azcarate-peril_altermann_hoover-fitzula_cano_klaenhammer_2004, title={Identification and inactivation of genetic loci involved with Lactobacillus acidophilus acid tolerance}, volume={70}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.70.9.5315-5322.2004}, number={9}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Azcarate-Peril, MA and Altermann, E and Hoover-Fitzula, RL and Cano, RJ and Klaenhammer, TR}, year={2004}, month={Sep}, pages={5315–5322} }
 @article{altermann_buck_cano_klaenhammer_2004, title={Identification and phenotypic characterization of the cell-division protein CdpA}, volume={342}, ISSN={["1879-0038"]}, DOI={10.1016/j.gene.2004.08.004}, number={1}, journal={GENE}, author={Altermann, E and Buck, BL and Cano, R and Klaenhammer, TR}, year={2004}, month={Nov}, pages={189–197} }
 @misc{barrangou_klaenhammer_altermann_2004, title={Lactobacillus acidophilus nucleic acids encoding fructo-oligosaccharide utilization compounds and uses thereof}, volume={7,407,787}, number={2004 Jun 22}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Barrangou, R. and Klaenhammer, T. R. and Altermann, E.}, year={2004} }
 @article{pridmore_berger_desiere_vilanova_barretto_pittet_zwahlen_rouvet_altermann_barrangou_et al._2004, title={The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533}, volume={101}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.0307327101}, number={8}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, publisher={Proceedings of the National Academy of Sciences}, author={Pridmore, RD and Berger, B and Desiere, F and Vilanova, D and Barretto, C and Pittet, AC and Zwahlen, MC and Rouvet, M and Altermann, E and Barrangou, R and et al.}, year={2004}, month={Feb}, pages={2512–2517} }
 @article{roberts_belfort_bestor_bhagwat_bickle_bitinaite_blumenthal_degtyarev_dryden_dybvig_et al._2003, title={A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes}, volume={31}, ISSN={["1362-4962"]}, DOI={10.1093/nar/gkg274}, number={7}, journal={NUCLEIC ACIDS RESEARCH}, author={Roberts, RJ and Belfort, M and Bestor, T and Bhagwat, AS and Bickle, TA and Bitinaite, J and Blumenthal, RM and Degtyarev, SK and Dryden, DTF and Dybvig, K and et al.}, year={2003}, month={Apr}, pages={1805–1812} }
 @article{ventura_canchaya_meylan_klaenhammer_zink_2003, title={Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification}, volume={69}, ISSN={["0099-2240"]}, DOI={10.1128/AEM.69.11.6908-6922.2003}, number={11}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Ventura, M and Canchaya, C and Meylan, V and Klaenhammer, TR and Zink, R}, year={2003}, month={Nov}, pages={6908–6922} }
 @article{barrangou_altermann_hutkins_cano_klaenhammer_2003, title={Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization by Lactobacillus acidophilus}, volume={100}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.1332765100}, number={15}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, publisher={Proceedings of the National Academy of Sciences}, author={Barrangou, R and Altermann, E and Hutkins, R and Cano, R and Klaenhammer, TR}, year={2003}, month={Jul}, pages={8957–8962} }
 @article{lu_breidt_fleming_altermann_klaenhammer_2003, title={Isolation and characterization of a Lactobacillus plantarum bacteriophage, Phi JL-1, from a cucumber fermentation}, volume={84}, ISSN={["1879-3460"]}, DOI={10.1016/S0168-1605(03)00111-9}, number={2}, journal={INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY}, author={Lu, Z and Breidt, F and Fleming, HP and Altermann, E and Klaenhammer, TR}, year={2003}, month={Jul}, pages={225–235} }
 @article{andrus_bowen_klaenhammer_hassan_2003, title={Molecular characterization and functional analysis of the manganese-containing superoxide dismutase gene (sodA) from Streptococcus thermophilus AO54}, volume={420}, ISSN={["1096-0384"]}, DOI={10.1016/j.abb.2003.09.007}, number={1}, journal={ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS}, author={Andrus, JM and Bowen, SW and Klaenhammer, TR and Hassan, HM}, year={2003}, month={Dec}, pages={103–113} }
 @misc{russell_klaenhammer_2003, title={Polynucleotide encoding a Lactobacillus gasseri beta-glucuronidase polypeptide}, volume={6,664,097}, number={2003 Dec. 16}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Russell, W. M. and Klaenhammer, T. R.}, year={2003} }
 @article{barrangou_yoon_breidt_fleming_klaenhammer_2002, title={Characterization of six Leuconostoc fallax bacteriophages isolated from an industrial sauerkraut fermentation}, volume={68}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.68.11.5452-5458.2002}, number={11}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, publisher={American Society for Microbiology}, author={Barrangou, R and Yoon, SS and Breidt, F and Fleming, HP and Klaenhammer, TR}, year={2002}, month={Nov}, pages={5452–5458} }
 @article{klaenhammer_altermann_arigoni_bolotin_breidt_broadbent_cano_chaillou_deutscher_gasson_et al._2002, title={Discovering lactic acid bacteria by genomics}, volume={82}, DOI={10.1007/978-94-017-2029-8_3}, number={1-4}, journal={Antonie Van Leeuwenhoek}, author={Klaenhammer, T. and Altermann, E. and Arigoni, F. and Bolotin, A. and Breidt, F. and Broadbent, J. and Cano, R. and Chaillou, S. and Deutscher, J. and Gasson, M. and et al.}, year={2002}, pages={29–58} }
 @article{sturino_klaenhammer_2002, title={Expression of antisense RNA targeted against Streptococcus thermophilus bacteriophages}, volume={68}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.68.2.588-596.2002}, number={2}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Sturino, JM and Klaenhammer, TR}, year={2002}, month={Feb}, pages={588–596} }
 @article{mermelstein_fennema_batt_goff_griffiths_hoover_hsieh_juneja_kroger_lund_et al._2002, title={Food research trends - 2003 and beyond}, volume={56}, number={12}, journal={Food Technology}, author={Mermelstein, N. H. and Fennema, O. R. and Batt, C. A. and Goff, H. D. and Griffiths, M. W. and Hoover, D. G. and Hsieh, F. H. and Juneja, V. K. and Kroger, M. and Lund, D. B. and et al.}, year={2002}, pages={30-} }
 @article{barrangou_yoon_breidt_fleming_klaenhammer_2002, title={Identification and characterization of Leuconostoc fallax strains isolated from an industrial sauerkraut fermentation}, volume={68}, ISSN={["0099-2240"]}, DOI={10.1128/AEM.68.6.2877-2884.2002}, number={6}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, publisher={American Society for Microbiology}, author={Barrangou, R and Yoon, SS and Breidt, F and Fleming, HP and Klaenhammer, TR}, year={2002}, month={Jun}, pages={2877–2884} }
 @article{yoon_barrangou-poueys_breidt_klaenhammer_fleming_2002, title={Isolation and characterization of bacteriophages from fermenting sauerkraut}, volume={68}, ISSN={["0099-2240"]}, DOI={10.1128/AEM.68.2.973-976.2002}, number={2}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, publisher={American Society for Microbiology}, author={Yoon, SS and Barrangou-Poueys, R and Breidt, F and Klaenhammer, TR and Fleming, HP}, year={2002}, month={Feb}, pages={973–976} }
 @article{durmaz_madsen_israelsen_klaenhammer_2002, title={Lactococcus lactis lytic bacteriophages of the p335 group are inhibited by overexpression of a truncated CI repressor}, volume={184}, ISSN={["0021-9193"]}, DOI={10.1128/JB.184.23.6532-6543.2002}, number={23}, journal={JOURNAL OF BACTERIOLOGY}, author={Durmaz, E and Madsen, SA and Israelsen, H and Klaenhammer, TR}, year={2002}, month={Dec}, pages={6532–6543} }
 @article{tuler_callanan_klaenhammer_2002, title={Overexpression of peptidases in Lactococcus and evaluation of their release from leaky cells}, volume={85}, ISSN={["1525-3198"]}, DOI={10.3168/jds.S0022-0302(02)74326-9}, number={10}, journal={JOURNAL OF DAIRY SCIENCE}, author={Tuler, TR and Callanan, MJ and Klaenhammer, TR}, year={2002}, month={Oct}, pages={2438–2450} }
 @misc{kullen_klaenhammer_2001, title={Acid-inducible promoters for gene expression}, volume={6,242,194}, number={2001 June 5}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Kullen, M. J. and Klaenhammer, T. R.}, year={2001} }
 @article{madsen_mills_djordjevic_israelsen_klaenhammer_2001, title={Analysis of the genetic switch and replication region of a P335-type bacteriophage with an obligate lytic lifestyle on Lactococcus lactis}, volume={67}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.67.3.1128-1139.2001}, number={3}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Madsen, SM and Mills, D and Djordjevic, G and Israelsen, H and Klaenhammer, TR}, year={2001}, month={Mar}, pages={1128–1139} }
 @article{russell_klaenhammer_2001, title={Efficient system for directed integration into the Lactobacillus acidophilus and Lactobacillus gasseri chromosomes via homologous recombination}, volume={67}, ISSN={["0099-2240"]}, DOI={10.1128/AEM.67.9.4361-4364.2001}, number={9}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Russell, WM and Klaenhammer, TR}, year={2001}, month={Sep}, pages={4361–4364} }
 @article{russell_klaenhammer_2001, title={Identification and cloning of gusA, encoding a new beta-glucuronidase from Lactobacillus gasseri ADH}, volume={67}, ISSN={["0099-2240"]}, DOI={10.1128/AEM.67.3.1253-1261.2001}, number={3}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Russell, WM and Klaenhammer, TR}, year={2001}, month={Mar}, pages={1253–1261} }
 @article{walker_klaenhammer_2001, title={Leaky Lactococcus cultures that externalize enzymes and antigens independently of culture lysis and secretion and export pathways}, volume={67}, ISSN={["1098-5336"]}, DOI={10.1128/AEM.67.1.251-259.2001}, number={1}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Walker, SA and Klaenhammer, TR}, year={2001}, month={Jan}, pages={251–259} }
 @misc{sanders_klaenhammer_2001, title={The scientific basis of Lactobacillus acidophilus NCFM functionality as a probiotic}, volume={84}, ISSN={["0022-0302"]}, DOI={10.3168/jds.S0022-0302(01)74481-5}, number={2}, journal={JOURNAL OF DAIRY SCIENCE}, author={Sanders, ME and Klaenhammer, TR}, year={2001}, month={Feb}, pages={319–331} }
 @article{walker_klaenhammer_2000, title={An explosive antisense RNA strategy for inhibition of a lactococcal bacteriophage}, volume={66}, ISSN={["0099-2240"]}, DOI={10.1128/AEM.66.1.310-319.2000}, number={1}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Walker, SA and Klaenhammer, TR}, year={2000}, month={Jan}, pages={310–319} }
 @article{durmaz_klaenhammer_2000, title={Genetic analysis of chromosomal regions of Lactococcus lactis acquired by recombinant lytic phages}, volume={66}, ISSN={["0099-2240"]}, DOI={10.1128/AEM.66.3.895-903.2000}, number={3}, journal={APPLIED AND ENVIRONMENTAL MICROBIOLOGY}, author={Durmaz, E and Klaenhammer, TR}, year={2000}, month={Mar}, pages={895–903} }
 @article{kullen_klaenhammer_2000, title={Genetic modification of intestinal lactobacilli and bifidobacteria}, volume={2}, ISBN={1467-3037}, DOI={10.21775/cimb.002.041}, number={2}, journal={Current Issues in Molecular Biology}, author={Kullen, M. J. and Klaenhammer, T. R.}, year={2000}, pages={41} }
 @article{klaenhammer_2000, title={Probiotic bacteria: Today and tomorrow}, volume={130}, ISSN={["0022-3166"]}, DOI={10.1093/jn/130.2.415s}, number={2}, journal={JOURNAL OF NUTRITION}, author={Klaenhammer, TR}, year={2000}, month={Feb}, pages={415S–416S} }
 @article{kullen_sanozky-dawes_crowell_klaenhammer_2000, title={Use of the DNA sequence of variable regions of the 16S rRNA gene for rapid and accurate identification of bacteria in the Lactobacillus acidophilus complex}, volume={89}, ISSN={["1364-5072"]}, DOI={10.1046/j.1365-2672.2000.01146.x}, number={3}, journal={JOURNAL OF APPLIED MICROBIOLOGY}, author={Kullen, MJ and Sanozky-Dawes, RB and Crowell, DC and Klaenhammer, TR}, year={2000}, month={Sep}, pages={511–516} }
 @article{mccormick_klaenhammer_stiles_1999, title={Colicin V can be produced by lactic acid bacteria}, volume={29}, ISSN={["0266-8254"]}, DOI={10.1046/j.1365-2672.1999.00571.x}, number={1}, journal={LETTERS IN APPLIED MICROBIOLOGY}, author={McCormick, JK and Klaenhammer, TR and Stiles, ME}, year={1999}, month={Jul}, pages={37–41} }
 @article{kullen_klaenhammer_1999, title={Identification of the pH-inducible, proton-translocating F1F0- ATPase (atpBEFHAGDC) operon of Lactobacillus acidophilus by differential display: gene structure, cloning and characterization}, volume={33}, DOI={10.1046/j.1365-2958.1999.01557.x}, number={6}, journal={Molecular Microbiology}, author={Kullen, M. J. and Klaenhammer, T. R.}, year={1999}, pages={1152–1161} }
 @article{klaenhammer_kullen_1999, title={Selection and design of probiotics}, volume={50}, ISSN={["0168-1605"]}, DOI={10.1016/S0168-1605(99)00076-8}, number={1-2}, journal={INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY}, author={Klaenhammer, TR and Kullen, MJ}, year={1999}, month={Sep}, pages={45–57} }
 @article{walker_girgis_klaenhammer_1999, title={The groESL chaperone operon of Lactobacillus johnsonii}, volume={65}, number={7}, journal={Applied and Environmental Microbiology}, author={Walker, D. C. and Girgis, H. S. and Klaenhammer, T. R.}, year={1999}, pages={3033–3041} }
 @article{dinsmore_dj o'sullivan_klaenhammer_1998, title={A leucine repeat motif in AbiA is required for resistance of Lactococcus lactis to phages representing three species.}, volume={212}, ISSN={["0378-1119"]}, DOI={10.1016/S0378-1119(98)00132-2}, number={1}, journal={GENE}, author={Dinsmore, PK and DJ O'Sullivan and Klaenhammer, TR}, year={1998}, month={May}, pages={5–11} }
 @misc{klaenhammer_conkling_o'sullivan_djordjevic_walker_taylor_1998, title={Bacteriophage-triggered cell suicide systems and fermentation methods employing the same}, volume={5,792,625}, number={1998 Aug. 11}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Klaenhammer, T. R. and Conkling, M. A. and O'Sullivan, D. and Djordjevic, G. and Walker, S. A. and Taylor, C. G.}, year={1998} }
 @article{walker_dombroski_klaenhammer_1998, title={Common elements regulating gene expression in temperate and lytic bacteriophages of Lactococcus species}, volume={64}, number={3}, journal={Applied and Environmental Microbiology}, author={Walker, S. A. and Dombroski, C. S. and Klaenhammer, T. R.}, year={1998}, pages={1147–1152} }
 @article{dj o'sullivan_klaenhammer_1998, title={Control of expression of LlaI restriction in Lactococcus lactis}, volume={27}, ISSN={["1365-2958"]}, DOI={10.1046/j.1365-2958.1998.00748.x}, number={5}, journal={MOLECULAR MICROBIOLOGY}, author={DJ O'Sullivan and Klaenhammer, TR}, year={1998}, month={Mar}, pages={1009–1020} }
 @article{klaenhammer_1998, title={Functional activities of Lactobacillus probiotics: Genetic mandate}, volume={8}, ISSN={["0958-6946"]}, DOI={10.1016/S0958-6946(98)00076-4}, number={5-6}, journal={INTERNATIONAL DAIRY JOURNAL}, author={Klaenhammer, TR}, year={1998}, pages={497–505} }
 @misc{djordjevic_klaenhammer_1998, title={Inducible gene expression systems in Lactococcus lactis}, volume={9}, ISSN={["1073-6085"]}, DOI={10.1007/BF02760814}, number={2}, journal={MOLECULAR BIOTECHNOLOGY}, author={Djordjevic, GM and Klaenhammer, TR}, year={1998}, month={Apr}, pages={127–139} }
 @article{walker_klaenhammer_1998, title={Molecular characterization of a phage-inducible middle promoter and its transcriptional activator from the lactococcal bacteriophage phi 31}, volume={180}, number={4}, journal={Journal of Bacteriology}, author={Walker, S. A. and Klaenhammer, T. R.}, year={1998}, pages={921–931} }
 @misc{allison_klaenhammer_1998, title={Phage resistance mechanisms in lactic acid bacteria}, volume={8}, ISSN={["0958-6946"]}, DOI={10.1016/S0958-6946(98)00043-0}, number={3}, journal={INTERNATIONAL DAIRY JOURNAL}, author={Allison, GE and Klaenhammer, TR}, year={1998}, month={Mar}, pages={207–226} }
 @article{klaenhammer_connolly_fitzgerald_stanton_ross_1998, title={Special issue - Functional foods: Designer foods for the future}, volume={8}, number={5-6}, journal={International Dairy Journal}, author={Klaenhammer, T. R. and Connolly, J. F. and Fitzgerald, R. J. and Stanton, C. and Ross, R. P.}, year={1998}, pages={vv} }
 @article{djordjevic_osullivan_walker_conkling_klaenhammer_1997, title={A triggered-suicide system designed as a defense against bacteriophages}, volume={179}, ISSN={["0021-9193"]}, DOI={10.1128/jb.179.21.6741-6748.1997}, number={21}, journal={JOURNAL OF BACTERIOLOGY}, author={Djordjevic, GM and OSullivan, DJ and Walker, SA and Conkling, MA and Klaenhammer, TR}, year={1997}, month={Nov}, pages={6741–6748} }
 @article{djordjevic_klaenhammer_1997, title={Bacteriophage-triggered defense systems: Phage adaptation and design improvements}, volume={63}, number={11}, journal={Applied and Environmental Microbiology}, author={Djordjevic, G. M. and Klaenhammer, T. R.}, year={1997}, pages={4370–4376} }
 @misc{djordjevic_klaenhammer_1997, title={Genes and gene expression in Lactococcus bacteriophages}, volume={7}, ISSN={["0958-6946"]}, DOI={10.1016/S0958-6946(97)00060-5}, number={8-9}, journal={INTERNATIONAL DAIRY JOURNAL}, author={Djordjevic, GM and Klaenhammer, TR}, year={1997}, pages={489–508} }
 @misc{klaenhammer_moineau_1997, title={Method of eliminating genetic routes for bacteriophage evolution and products produced thereby}, volume={5,618,723}, number={1997 Apr. 8}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Klaenhammer, T. R. and Moineau, S.}, year={1997} }
 @article{dinsmore_klaenhammer_1997, title={Molecular characterization of a genomic region in a Lactococcus bacteriophage that is involved in its sensitivity to the phage defense mechanism AbiA}, volume={179}, ISSN={["0021-9193"]}, DOI={10.1128/jb.179.9.2949-2957.1997}, number={9}, journal={JOURNAL OF BACTERIOLOGY}, author={Dinsmore, PK and Klaenhammer, TR}, year={1997}, month={May}, pages={2949–2957} }
 @misc{klaenhammer_sing_hill_1997, title={Phage defense rotation strategy}, volume={5,593,885}, number={1997 Jan. 14}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Klaenhammer, T. R. and Sing, W. D. and Hill, C. J.}, year={1997} }
 @misc{hill_klaenhammer_1996, title={Bacteriophage resistant recombinant bacteria}, volume={5,538,864}, number={1996 Jul. 23}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Hill, C. J. and Klaenhammer, T. R.}, year={1996} }
 @misc{klaenhammer_moineau_1996, title={Method of eliminating genetic routes for bacteriophage evolution and products produced thereby}, volume={5,580,725}, number={1996 Dec. 3}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Klaenhammer, T. R. and Moineau, S.}, year={1996} }
 @article{klaenhammer_1995, title={Genetics of intestinal lactobacilli}, volume={5}, ISSN={["1879-0143"]}, DOI={10.1016/0958-6946(95)00044-5}, number={8}, journal={INTERNATIONAL DAIRY JOURNAL}, author={Klaenhammer, TR}, year={1995}, pages={1019–1058} }
 @article{klaenhammer_1993, title={Genetics of bacteriocins produced by lactic-acid bacteria}, volume={12}, DOI={10.1111/j.1574-6976.1993.tb00012.x}, number={39085}, journal={FEMS Microbiology Reviews}, author={Klaenhammer, T. R.}, year={1993}, pages={39–86} }
 @misc{klaenhammer_sanozky_steenson_1992, title={PTR2030, a conjugal plasmid and derivatives thereof that confer phage resistance to group N streptococci}, volume={5,139,950}, number={1992 Aug. 18}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Klaenhammer, T. R. and Sanozky, R. B. and Steenson, L. R.}, year={1992} }
 @article{klaenhammer_sing_1991, title={A novel rotation strategy using different phage defenses in a single-strain starter culture system}, volume={74}, journal={Journal of Dairy Science}, author={Klaenhammer, T. R. and Sing, W. D.}, year={1991}, pages={120} }
 @article{klaenhammer_1991, title={DEVELOPMENT OF BACTERIOPHAGE-RESISTANT STRAINS OF LACTIC-ACID BACTERIA}, volume={19}, ISSN={["0300-5127"]}, DOI={10.1042/bst0190675}, number={3}, journal={BIOCHEMICAL SOCIETY TRANSACTIONS}, author={KLAENHAMMER, TR}, year={1991}, month={Aug}, pages={675–681} }
 @misc{klaenhammer_sanozky_steenson_1990, title={pTR2030, a conjugal plasmid and derivatives thereof that confer phage reisistance to group N streptococci}, volume={4,931,396}, number={1990 Jun. 5}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Klaenhammer, T. R. and Sanozky, R. B. and Steenson, L. R.}, year={1990} }
 @article{klaenhammer_1989, title={Genetic characterization of multiple mechanisms of phage defense from a prototype phage-insensitive strain, Lactococcus lactis ME2}, volume={72}, DOI={10.3168/jds.S0022-0302(89)79505-9}, number={12}, journal={Journal of Dairy Science}, author={Klaenhammer, T. R.}, year={1989}, pages={3429} }
 @misc{klaenhammer_sanozky-dawes_1989, title={pTN1060, a conjugal plasmid and derivatives thereof that confer phage resistance to group N streptococci}, volume={4,883,756}, number={1989 Nov. 28}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Klaenhammer, T. R. and Sanozky-Dawes, R. B.}, year={1989} }
 @article{klaenhammer_1988, title={BACTERIOCINS OF LACTIC-ACID BACTERIA}, volume={70}, ISSN={["1638-6183"]}, DOI={10.1016/0300-9084(88)90206-4}, number={3}, journal={BIOCHIMIE}, author={KLAENHAMMER, TR}, year={1988}, month={Mar}, pages={337–349} }
 @misc{daeschel_mcfeeters_fleming_klaenhammer_sanozky_1987, title={Lactic acid bacteria which do not decarboxylate malic acid and fermentation therewith}, volume={4,666,849}, number={1987 May 19}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Daeschel, M. A. and McFeeters, R. F. and Fleming, H. P and Klaenhammer, T. R. and Sanozky, R. B.}, year={1987} }
 @article{klaenhammer_1987, title={Plasmid-directed mechanisms for bacteriophage defense in lactic streptococci}, volume={46}, DOI={10.1111/j.1574-6968.1987.tb02468.x}, number={3}, journal={FEMS Microbiology Reviews}, author={Klaenhammer, T. R.}, year={1987}, pages={313} }
 @article{joerger_klaenhammer_1986, title={CHARACTERIZATION AND PURIFICATION OF HELVETICIN-J AND EVIDENCE FOR A CHROMOSOMALLY DETERMINED BACTERIOCIN PRODUCED BY LACTOBACILLUS-HELVETICUS-481}, volume={167}, ISSN={["0021-9193"]}, DOI={10.1128/jb.167.2.439-446.1986}, number={2}, journal={JOURNAL OF BACTERIOLOGY}, author={JOERGER, MC and KLAENHAMMER, TR}, year={1986}, month={Aug}, pages={439–446} }
 @article{barefoot_klaenhammer_1983, title={Detection and activity of lactacin-b, a bacteriocin produced by lactobacillus-acidophilus}, volume={45}, number={6}, journal={Applied and Environmental Microbiology}, author={Barefoot, S. F. and Klaenhammer, T. R.}, year={1983}, pages={1808–1815} }