@article{dai_zhai_lin_wang_meng_li_mao_gao_ma_zhang_et al._2023, title={Cell-type-specific PtrWOX4a and PtrVCS2 form a regulatory nexus with a histone modification system for stem cambium development in Populus trichocarpa}, ISSN={["2055-0278"]}, DOI={10.1038/s41477-022-01315-7}, journal={NATURE PLANTS}, author={Dai, Xiufang and Zhai, Rui and Lin, Jiaojiao and Wang, Zhifeng and Meng, Dekai and Li, Meng and Mao, Yuli and Gao, Boyuan and Ma, Hongyan and Zhang, Baofeng and et al.}, year={2023}, month={Jan} } @article{liu_gao_sun_li_zhang_wang_zhou_sulis_wang_chiang_et al._2022, title={Dimerization of PtrMYB074 and PtrWRKY19 mediates transcriptional activation of PtrbHLH186 for secondary xylem development in Populus trichocarpa}, ISSN={["1469-8137"]}, DOI={10.1111/nph.18028}, journal={NEW PHYTOLOGIST}, author={Liu, Huizi and Gao, Jinghui and Sun, Jiatong and Li, Shuang and Zhang, Baofeng and Wang, Zhuwen and Zhou, Chenguang and Sulis, Daniel Barletta and Wang, Jack P. and Chiang, Vincent L. and et al.}, year={2022}, month={Mar} } @article{li_cai_zhang_pei_chen_jiang_han_zhao_li_zhang_et al._2022, title={The Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis}, volume={11}, ISSN={["2047-217X"]}, DOI={10.1093/gigascience/giac057}, journal={GIGASCIENCE}, author={Li, Xiang and Cai, Kewei and Zhang, Qinhui and Pei, Xiaona and Chen, Song and Jiang, Luping and Han, Zhiming and Zhao, Minghui and Li, Yan and Zhang, Xinxin and et al.}, year={2022} } @article{yu_zhou_li_li_lin_wang_chiang_li_2022, title={p A PtrLBD39-mediated transcriptional network regulates tension wood formation in Populus trichocarpa}, volume={3}, ISSN={["2590-3462"]}, DOI={10.1016/j.xplc.2021.100250}, number={1}, journal={PLANT COMMUNICATIONS}, author={Yu, Jing and Zhou, Chenguang and Li, Danning and Li, Shuang and Lin, Ying-Chung Jimmy and Wang, Jack P. and Chiang, Vincent L. and Li, Wei}, year={2022}, month={Jan} } @article{matthews_wang_sederoff_chiang_williams_2021, title={A multiscale model of lignin biosynthesis for predicting bioenergy traits in Populus trichocarpa}, volume={19}, ISSN={["2001-0370"]}, DOI={10.1016/j.csbj.2020.11.046}, journal={COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL}, author={Matthews, Megan L. and Wang, Jack P. and Sederoff, Ronald and Chiang, Vincent L. and Williams, Cranos M.}, year={2021}, pages={168–182} } @misc{li_li_zhao_pang_wei_tigabu_chiang_sederoff_sederoff_zhao_2021, title={An Overview of the Practices and Management Methods for Enhancing Seed Production in Conifer Plantations for Commercial Use}, volume={7}, ISSN={["2311-7524"]}, DOI={10.3390/horticulturae7080252}, number={8}, journal={HORTICULTURAE}, author={Li, Yan and Li, Xiang and Zhao, Ming-Hui and Pang, Zhong-Yi and Wei, Jia-Tong and Tigabu, Mulualem and Chiang, Vincent L. and Sederoff, Heike and Sederoff, Ronald and Zhao, Xi-Yang}, year={2021}, month={Aug} } @article{vries_brouckaert_chanoca_kim_regner_timokhin_sun_de meester_van doorsselaere_goeminne_et al._2021, title={CRISPR-Cas9 editing of CAFFEOYL SHIKIMATE ESTERASE 1 and 2 shows their importance and partial redundancy in lignification in Populus tremula x P. alba}, ISSN={["1467-7652"]}, DOI={10.1111/pbi.13651}, journal={PLANT BIOTECHNOLOGY JOURNAL}, author={Vries, Lisanne and Brouckaert, Marlies and Chanoca, Alexandra and Kim, Hoon and Regner, Matthew R. and Timokhin, Vitaliy I. and Sun, Yi and De Meester, Barbara and Van Doorsselaere, Jan and Goeminne, Geert and et al.}, year={2021}, month={Aug} } @article{zhang_yang_li_chiang_fu_2021, title={Cooperative Regulation of Flavonoid and Lignin Biosynthesis in Plants}, ISBN={1549-7836}, DOI={10.1080/07352689.2021.1898083}, journal={CRITICAL REVIEWS IN PLANT SCIENCES}, author={Zhang, Su and Yang, Jie and Li, Hongquan and Chiang, Vincent L. and Fu, Yujie}, year={2021} } @article{lin_sun_song_chen_shi_yang_liu_tunlaya-anukit_liu_loziuk_et al._2021, title={Enzyme Complexes of Ptr4CL and PtrHCT Modulate Co-enzyme A Ligation of Hydroxycinnamic Acids for Monolignol Biosynthesis in Populus trichocarpa}, volume={12}, ISSN={["1664-462X"]}, DOI={10.3389/fpls.2021.727932}, journal={FRONTIERS IN PLANT SCIENCE}, author={Lin, Chien-Yuan and Sun, Yi and Song, Jina and Chen, Hsi-Chuan and Shi, Rui and Yang, Chenmin and Liu, Jie and Tunlaya-Anukit, Sermsawat and Liu, Baoguang and Loziuk, Philip L. and et al.}, year={2021}, month={Oct} } @misc{li_he_gao_zhou_chiang_li_2021, title={Histone Acetylation Changes in Plant Response to Drought Stress}, volume={12}, ISSN={["2073-4425"]}, DOI={10.3390/genes12091409}, number={9}, journal={GENES}, author={Li, Shuang and He, Xu and Gao, Yuan and Zhou, Chenguang and Chiang, Vincent L. and Li, Wei}, year={2021}, month={Sep} } @misc{yan_pei_zhang_li_zhang_zhao_chiang_sederoff_zhao_2021, title={MYB-Mediated Regulation of Anthocyanin Biosynthesis}, volume={22}, ISBN={1422-0067}, DOI={10.3390/ijms22063103}, number={6}, journal={INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES}, author={Yan, Huiling and Pei, Xiaona and Zhang, Heng and Li, Xiang and Zhang, Xinxin and Zhao, Minghui and Chiang, Vincent L. and Sederoff, Ronald Ross and Zhao, Xiyang}, year={2021}, month={Mar} } @article{li_li_zhao_hu_meng_song_tigabu_chiang_sederoff_ma_et al._2021, title={Molecular and Metabolic Insights into Anthocyanin Biosynthesis for Leaf Color Change in Chokecherry (Padus virginiana)}, volume={22}, ISSN={["1422-0067"]}, DOI={10.3390/ijms221910697}, number={19}, journal={INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES}, author={Li, Xiang and Li, Yan and Zhao, Minghui and Hu, Yanbo and Meng, Fanjuan and Song, Xingshun and Tigabu, Mulualem and Chiang, Vincent L. and Sederoff, Ronald and Ma, Wenjun and et al.}, year={2021}, month={Oct} } @article{liu_liu_yu_wang_sun_li_lin_chiang_li_wang_2021, title={Transcriptional reprogramming of xylem cell wall biosynthesis in tension wood}, volume={186}, ISSN={["1532-2548"]}, url={https://doi.org/10.1093/plphys/kiab038}, DOI={10.1093/plphys/kiab038}, number={1}, journal={PLANT PHYSIOLOGY}, publisher={Oxford University Press (OUP)}, author={Liu, Baoguang and Liu, Juan and Yu, Jing and Wang, Zhifeng and Sun, Yi and Li, Shuang and Lin, Ying-Chung Jimmy and Chiang, Vincent L. and Li, Wei and Wang, Jack P.}, year={2021}, month={May}, pages={250–269} } @article{edmunds_peralta_sharma-shivappa_kelley_chiang_miller_giles_sykes_deoppke_gjersing_et al._2020, title={Fungal Pretreatment and Enzymatic Hydrolysis of Genetically-modified Populus trichocarpa}, volume={15}, ISBN={1930-2126}, DOI={10.15376/biores.15.3.6488-6505}, number={3}, journal={BIORESOURCES}, author={Edmunds, Charles W. and Peralta, Perry and Sharma-Shivappa, Ratna R. and Kelley, Stephen S. and Chiang, Vincent L. and Miller, Zachary D. and Giles, Richard L. and Sykes, Robert W. and Deoppke, Crissa and Gjersing, Erica and et al.}, year={2020}, month={Aug}, pages={6488–6505} } @misc{niu_wang_yuan_sederoff_sederoff_chiang_borriss_2020, title={Microbial Interactions Within Multiple-Strain Biological Control Agents Impact Soil-Borne Plant Disease}, volume={11}, ISBN={1664-302X}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-85094139988&partnerID=MN8TOARS}, DOI={10.3389/fmicb.2020.585404}, journal={FRONTIERS IN MICROBIOLOGY}, author={Niu, Ben and Wang, Weixiong and Yuan, Zhibo and Sederoff, Ronald R. and Sederoff, Heike and Chiang, Vincent L. and Borriss, Rainer}, year={2020} } @article{liu_li_wang_fan_yang_wang_fu_ge_sederoff_sederoff_et al._2020, title={Qu-2, a robust poplar suspension cell line for molecular biology}, ISBN={1993-0607}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-85097191965&partnerID=MN8TOARS}, DOI={10.1007/s11676-020-01266-9}, journal={JOURNAL OF FORESTRY RESEARCH}, author={Liu, Caixia and Li, Kailong and Wang, Meng and Fan, Erqin and Yang, Chuanping and Wang, Junhui and Fu, Pengyue and Ge, Xiaolan and Sederoff, Heike W. and Sederoff, Ronald R. and et al.}, year={2020} } @article{straub_bing_wang_chiang_adams_kelly_2020, title={Use of the lignocellulose-degrading bacterium Caldicellulosiruptor bescii to assess recalcitrance and conversion of wild-type and transgenic poplar}, volume={13}, ISBN={1754-6834}, DOI={10.1186/s13068-020-01675-2}, number={1}, journal={BIOTECHNOLOGY FOR BIOFUELS}, author={Straub, Christopher T. and Bing, Ryan G. and Wang, Jack P. and Chiang, Vincent L. and Adams, Michael W. W. and Kelly, Robert M.}, year={2020} } @article{yeh_wang_miao_ma_kao_hsu_yu_hung_lin_kuan_et al._2019, title={A novel synthetic-genetic-array-based yeast one-hybrid system for high discovery rate and short processing time}, volume={29}, ISBN={1549-5469}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-85071056042&partnerID=MN8TOARS}, DOI={10.1101/gr.245951.118}, number={8}, journal={GENOME RESEARCH}, author={Yeh, Chung-Shu and Wang, Zhifeng and Miao, Fang and Ma, Hongyan and Kao, Chung-Ting and Hsu, Tzu-Shu and Yu, Jhong-He and Hung, Er-Tsi and Lin, Chia-Chang and Kuan, Chen-Yu and et al.}, year={2019}, month={Aug}, pages={1343–1351} } @article{miller_peralta_mitchell_kelley_chiang_pearson_rottmann_cunningham_peszlen_2019, title={ANATOMICAL, PHYSICAL, AND MECHANICAL PROPERTIES OF TRANSGENIC LOBLOLLY PINE (PINUS TAEDA L.) MODIFIED FOR INCREASED DENSITY}, volume={51}, ISBN={0735-6161}, DOI={10.22382/wfs-2019-018}, number={2}, journal={WOOD AND FIBER SCIENCE}, author={Miller, Z. D. and Peralta, P. N. and Mitchell, P. H. and Kelley, S. S. and Chiang, V. L. and Pearson, L. and Rottmann, W. H. and Cunningham, M. W. and Peszlen, I. M.}, year={2019}, month={Apr}, pages={173–182} } @article{miller_peralta_mitchell_chiang_kelley_edmunds_peszlen_2019, title={Anatomy and Chemistry of Populus trichocarpa with Genetically Modified Lignin Content}, volume={14}, ISBN={1930-2126}, DOI={10.15376/biores.14.3.5729-5746}, number={3}, journal={BIORESOURCES}, author={Miller, Zachary D. and Peralta, Perry N. and Mitchell, Phil and Chiang, Vincent L. and Kelley, Stephen S. and Edmunds, Charles W. and Peszlen, Ilona M.}, year={2019}, pages={5729–5746} } @article{yan_liu_kim_liu_huang_yang_lin_chen_yang_wang_et al._2019, title={CAD1 and CCR2 protein complex formation in monolignol biosynthesis in Populus trichocarpa}, volume={222}, ISBN={1469-8137}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-85055556739&partnerID=MN8TOARS}, DOI={10.1111/nph.15505}, number={1}, journal={NEW PHYTOLOGIST}, author={Yan, Xiaojing and Liu, Jie and Kim, Hoon and Liu, Baoguang and Huang, Xiong and Yang, Zhichang and Lin, Ying-Chung Jimmy and Chen, Hao and Yang, Chenmin and Wang, Jack P. and et al.}, year={2019}, month={Apr}, pages={244–260} } @misc{strauss_boerjan_chiang_costanza_coleman_davis_lu_mansfield_merkle_myburg_et al._2019, title={Certification for gene-edited forests}, volume={365}, ISBN={1095-9203}, DOI={10.1126/science.aay6165}, number={6455}, journal={SCIENCE}, author={Strauss, Steven H. and Boerjan, Wout and Chiang, Vincent and Costanza, Adam and Coleman, Heather and Davis, John M. and Lu, Meng-Zhu and Mansfield, Shawn D. and Merkle, Scott and Myburg, Alexander and et al.}, year={2019}, pages={767–768} } @article{wang_liu_sun_chiang_sederoff_2019, title={Enzyme-Enzyme Interactions in Monolignol Biosynthesis}, volume={9}, url={http://dx.doi.org/10.3389/fpls.2018.01942}, DOI={10.3389/fpls.2018.01942}, journal={Frontiers in Plant Science}, author={Wang, J.P. and Liu, B. and Sun, Y. and Chiang, V.L. and Sederoff, R.R.}, year={2019}, month={Jan} } @article{wang_matthews_naik_williams_ducoste_sederoff_chiang_2019, title={Flux modeling for monolignol biosynthesis}, volume={56}, ISSN={0958-1669}, url={http://dx.doi.org/10.1016/J.COPBIO.2018.12.003}, DOI={10.1016/J.COPBIO.2018.12.003}, journal={Current Opinion in Biotechnology}, publisher={Elsevier BV}, author={Wang, Jack P and Matthews, Megan L and Naik, Punith P and Williams, Cranos M and Ducoste, Joel J and Sederoff, Ronald R and Chiang, Vincent L}, year={2019}, month={Apr}, pages={187–192} } @article{straub_khatibi_wang_conway_williams-rhaesa_peszlen_chiang_adams_kelly_2019, title={Quantitative fermentation of unpretreated transgenic poplar by Caldicellulosiruptor bescii}, volume={10}, ISBN={2041-1723}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-85070390326&partnerID=MN8TOARS}, DOI={10.1038/s41467-019-11376-6}, number={1}, journal={NATURE COMMUNICATIONS}, publisher={Springer Science and Business Media LLC}, author={Straub, Christopher T. and Khatibi, Piyum A. and Wang, Jack P. and Conway, Jonathan M. and Williams-Rhaesa, Amanda M. and Peszlen, Ilona M. and Chiang, Vincent L. and Adams, Michael W. W. and Kelly, Robert M.}, year={2019} } @article{edmunds_peszlen_chiang_kelley_miller_davis_gjersing_peralta_2019, title={Thermo-mechanical Behavior of Genetically Modified Populus trichocarpa}, volume={14}, ISBN={1930-2126}, DOI={10.15376/biores.14.2.4760-4773}, number={2}, journal={BIORESOURCES}, author={Edmunds, Charles W. and Peszlen, Ilona and Chiang, Vincent L. and Kelley, Stephen S. and Miller, Zachary D. and Davis, Mark F. and Gjersing, Erica and Peralta, Perry}, year={2019}, month={May}, pages={4760–4773} } @article{miller_peralta_mitchell_chiang_edmunds_peszlen_2018, title={Altered Lignin Content and Composition in Transgenic Populus trichocarpa Results in a Decrease of Modulus of Elasticity}, volume={13}, DOI={10.15376/biores.13.4.7698-7708}, number={4}, journal={BIORESOURCES}, author={Miller, Zachary D. and Peralta, Perry N. and Mitchell, Phil and Chiang, Vincent L. and Edmunds, Charles W. and PESZLEN, ILONA}, year={2018}, pages={7698–7708} } @article{naik_wang_sederoff_chiang_williams_ducoste_2018, title={Assessing the impact of the 4CL enzyme complex on the robustness of monolignol biosynthesis using metabolic pathway analysis}, volume={13}, ISSN={1932-6203}, url={http://dx.doi.org/10.1371/journal.pone.0193896}, DOI={10.1371/journal.pone.0193896}, number={3}, journal={PLOS ONE}, publisher={Public Library of Science (PLoS)}, author={Naik, Punith and Wang, Jack P. and Sederoff, Ronald and Chiang, Vincent and Williams, Cranos and Ducoste, Joel J.}, editor={Cullen, DanielEditor}, year={2018}, month={Mar}, pages={e0193896} } @article{wang_matthews_williams_shi_yang_tunlaya-anukit_chen_li_liu_lin_et al._2018, title={Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis}, volume={9}, ISSN={2041-1723}, url={http://dx.doi.org/10.1038/s41467-018-03863-z}, DOI={10.1038/s41467-018-03863-z}, number={1}, journal={Nature Communications}, publisher={Springer Science and Business Media LLC}, author={Wang, Jack P. and Matthews, Megan L. and Williams, Cranos M. and Shi, Rui and Yang, Chenmin and Tunlaya-Anukit, Sermsawat and Chen, Hsi-Chuan and Li, Quanzi and Liu, Jie and Lin, Chien-Yuan and et al.}, year={2018}, month={Apr}, pages={1579} } @article{edmunds_peralta_kelley_chiang_sharma-shivappa_davis_harman-ware_sykes_gjersing_cunningham_et al._2017, title={Characterization and enzymatic hydrolysis of wood from transgenic Pinus taeda engineered with syringyl lignin or reduced lignin content}, volume={24}, DOI={10.1007/s10570-017-1231-z}, number={4}, journal={Cellulose}, author={Edmunds, C. W. and Peralta, P. and Kelley, Stephen and Chiang, V. L. and Sharma-Shivappa, R. R. and Davis, M. F. and Harman-Ware, A. E. and Sykes, R. W. and Gjersing, E. and Cunningham, M. W. and et al.}, year={2017}, pages={1901–1914} } @article{xiang_sen_min_savithri_lu_jameel_chiang_chang_2017, title={Field-grown transgenic hybrid poplar with modified lignin biosynthesis to improve enzymatic saccharification efficiency}, volume={5}, DOI={10.1021/acssuschemeng.6b02740}, number={3}, journal={ACS Sustainable Chemistry & Engineering}, author={Xiang, Z. Y. and Sen, S. K. and Min, D. Y. and Savithri, D. and Lu, F. C. and Jameel, H. and Chiang, V. and Chang, H. M.}, year={2017}, pages={2407–2414} } @article{lin_chen_li_li_wang_shi_tunlaya-anukit_shuai_wang_ma_et al._2017, title={Reciprocal cross-regulation of VND and SND multigene TF families for wood formation in Populus trichocarpa.}, volume={11}, url={http://europepmc.org/abstract/med/29078399}, DOI={10.1073/pnas.1714422114}, number={45}, journal={Proceedings of the National Academy of Sciences of the United States of America}, author={Lin, YJ and Chen, H and Li, Q and Li, W and Wang, JP and Shi, R and Tunlaya-Anukit, S and Shuai, P and Wang, Z and Ma, H and et al.}, year={2017}, month={Oct}, pages={E9722–E9729} } @article{chang_sederoff_chiang_umezawa_2017, title={Takayoshi Higuchi (1927–2017)}, volume={37}, ISSN={0277-3813 1532-2319}, url={http://dx.doi.org/10.1080/02773813.2017.1350792}, DOI={10.1080/02773813.2017.1350792}, number={5}, journal={Journal of Wood Chemistry and Technology}, publisher={Informa UK Limited}, author={Chang, Hou-min and Sederoff, Ron and Chiang, Vincent and Umezawa, Toshiaki}, year={2017}, month={Aug}, pages={405–406} } @article{shi_wang_lin_li_sun_chen_sederoff_chiang_2017, title={Tissue and cell-type co-expression networks of transcription factors and wood component genes in Populus trichocarpa}, volume={245}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-85009291513&partnerID=MN8TOARS}, DOI={10.1007/s00425-016-2640-1}, number={5}, journal={Planta}, author={Shi, R. and Wang, J.P. and Lin, Y.-C. and Li, Q. and Sun, Y.-H. and Chen, H. and Sederoff, R.R. and Chiang, V.L.}, year={2017}, pages={927–938} } @article{lin_li_tunlaya-anukit_shi_sun_wang_liu_loziuk_edmunds_miller_et al._2016, title={A cell wall-bound anionic peroxidase, PtrPO21, is involved in lignin polymerization in Populus trichocarpa}, volume={12}, ISSN={1614-2942 1614-2950}, url={http://dx.doi.org/10.1007/S11295-016-0978-Y}, DOI={10.1007/s11295-016-0978-y}, number={2}, journal={Tree Genetics & Genomes}, publisher={Springer Science and Business Media LLC}, author={Lin, Chien-Yuan and Li, Quanzi and Tunlaya-Anukit, Sermsawat and Shi, Rui and Sun, Ying-Hsuan and Wang, Jack P. and Liu, Jie and Loziuk, Philip and Edmunds, Charles W. and Miller, Zachary D. and et al.}, year={2016}, month={Mar} } @article{kumari_deng_gunasekara_chiang_chen_ma_davis_wei_2016, title={Bottom-up GGM algorithm for constructing multilayered hierarchical gene regulatory networks that govern biological pathways or processes}, volume={17}, DOI={10.1186/s12859-016-0981-1}, journal={BMC Bioinformatics}, author={Kumari, S. and Deng, W. P. and Gunasekara, C. and Chiang, V. and Chen, H. S. and Ma, H. and Davis, X. and Wei, H. R.}, year={2016} } @article{lin_wang_li_chen_liu_loziuk_song_williams_muddiman_sederoff_et al._2015, title={4-Coumaroyl and caffeoyl shikimic acids inhibit 4-coumaric acid:coenzyme a ligases and modulate metabolic flux for 3-hydroxylation in monolignol biosynthesis of populus trichocarpa}, volume={8}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84925201417&partnerID=MN8TOARS}, DOI={10.1016/j.molp.2014.12.003}, number={1}, journal={Molecular Plant}, author={Lin, C. Y. and Wang, Jack P. and Li, Q. Z. and Chen, H. C. and Liu, J. and Loziuk, P. and Song, J. and Williams, C. and Muddiman, David and Sederoff, R. R. and et al.}, year={2015}, pages={176–187} } @article{loziuk_parker_li_lin_wang_li_sederoff_chiang_muddiman_2015, title={Elucidation of Xylem-Specific Transcription Factors and Absolute Quantification of Enzymes Regulating Cellulose Biosynthesis in Populus trichocarpa}, volume={14}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84942916917&partnerID=MN8TOARS}, DOI={10.1021/acs.jproteome.5b00233}, number={10}, journal={Journal of Proteome Research}, author={Loziuk, P. L. and Parker, J. and Li, W. and Lin, C. Y. and Wang, Jack P. and Li, Q. Z. and Sederoff, R. R. and Chiang, V. L. and Muddiman, David}, year={2015}, pages={4158–4168} } @article{wang_chuang_loziuk_chen_lin_shi_qu_muddiman_sederoff_chiang_2015, title={Phosphorylation is an on/off switch for 5-hydroxyconiferaldehyde O-methyltransferase activity in poplar monolignol biosynthesis}, volume={112}, ISSN={0027-8424 1091-6490}, url={http://dx.doi.org/10.1073/PNAS.1510473112}, DOI={10.1073/pnas.1510473112}, abstractNote={Although phosphorylation has long been known to be an important regulatory modification of proteins, no unequivocal evidence has been presented to show functional control by phosphorylation for the plant monolignol biosynthetic pathway. Here, we present the discovery of phosphorylation-mediated on/off regulation of enzyme activity for 5-hydroxyconiferaldehyde O}, number={27}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Wang, Jack P. and Chuang, Ling and Loziuk, Philip L. and Chen, Hao and Lin, Ying-Chung and Shi, Rui and Qu, Guan-Zheng and Muddiman, David C. and Sederoff, Ronald R. and Chiang, Vincent L.}, year={2015}, month={Jun}, pages={8481–8486} } @article{li_yeh_yang_song_chen_sederoff_chiang_2015, title={Populus trichocarpa}, volume={1224}, DOI={10.1007/978-1-4939-1658-0_28}, journal={Agrobacterium protocols, volume 2, third edition}, author={Li, Q. Z. and Yeh, T. F. and Yang, C. M. and Song, J. Y. and Chen, Z. Z. and Sederoff, R. R. and Chiang, V. L.}, year={2015}, pages={357–363} } @article{xiang_sen_roy_min_savithri_jameel_chiang_chang_2015, title={Wood characteristics and enzymatic saccharification efficiency of field-grown transgenic black cottonwood with altered lignin content and structure}, volume={22}, DOI={10.1007/s10570-014-0541-7}, number={1}, journal={Cellulose}, author={Xiang, Z. Y. and Sen, S. K. and Roy, A. and Min, D. Y. and Savithri, D. and Jameel, H. and Chiang, V. and Chang, H. M.}, year={2015}, pages={683–693} } @article{nakatsubo_ragamustari_hattori_ono_yamamura_li_chiang_umezawa_2014, title={A new O-methyltransferase for monolignol synthesis in Carthamus tinctorius}, volume={31}, DOI={10.5511/plantbiotechnology.14.0903a}, number={5}, journal={Plant Biotechnology}, author={Nakatsubo, T. and Ragamustari, S. K. and Hattori, T. and Ono, E. and Yamamura, M. and Li, L. G. and Chiang, V. L. and Umezawa, T.}, year={2014}, pages={545–553} } @article{li_lin_li_shi_lin_chen_chuang_qu_sederoff_chiang_2014, title={A robust chromatin immunoprecipitation protocol for studying transcription factor-DNA interactions and histone modifications in wood-forming tissue}, volume={9}, DOI={10.1038/nprot.2014.146}, number={9}, journal={Nature Protocols}, author={Li, W. and Lin, Y. C. and Li, Q. and Shi, R. and Lin, C. Y. and Chen, H. and Chuang, L. and Qu, G. Z. and Sederoff, R. R. and Chiang, V. L.}, year={2014}, pages={2180–2193} } @article{lin_li_chen_li_sun_shi_lin_wang_chen_chuang_et al._2014, title={A simple improved-throughput xylem protoplast system for studying wood formation}, volume={9}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84907026654&partnerID=MN8TOARS}, DOI={10.1038/nprot.2014.147}, number={9}, journal={Nature Protocols}, author={Lin, Y.-C. and Li, W. and Chen, H. and Li, Q. and Sun, Y.-H. and Shi, R. and Lin, C.-Y. and Wang, J.P. and Chen, H.-C. and Chuang, L. and et al.}, year={2014}, pages={2194–2205} } @article{loziuk_sederoff_chiang_muddiman_2014, title={Establishing ion ratio thresholds based on absolute peak area for absolute protein quantification using protein cleavage isotope dilution mass spectrometry}, volume={139}, DOI={10.1039/c4an00567h}, number={21}, journal={Analyst [London]}, author={Loziuk, P. L. and Sederoff, R. R. and Chiang, V. L. and Muddiman, David}, year={2014}, pages={5439–5450} } @article{min_xiang_liu_jameel_chiang_jin_chang_2014, title={Improved Protocol for Alkaline Nitrobenzene Oxidation of Woody and Non-Woody Biomass}, volume={35}, ISSN={0277-3813 1532-2319}, url={http://dx.doi.org/10.1080/02773813.2014.902965}, DOI={10.1080/02773813.2014.902965}, number={1}, journal={Journal of Wood Chemistry and Technology}, publisher={Informa UK Limited}, author={Min, Douyong and Xiang, Zhouyang and Liu, Jie and Jameel, Hasan and Chiang, Vincent and Jin, Yongcan and Chang, Hou-min}, year={2014}, month={Sep}, pages={52–61} } @article{sutela_hahl_tiimonen_aronen_ylioja_laakso_saranpaa_chiang_julkunen-tiitto_haggman_2014, title={Phenolic compounds and expression of 4CL genes in silver birch clones and Pt4CL1a lines}, volume={9}, DOI={10.1371/journal.pone.0114434}, number={12}, journal={PLoS One}, author={Sutela, S. and Hahl, T. and Tiimonen, H. and Aronen, T. and Ylioja, T. and Laakso, T. and Saranpaa, P. and Chiang, V. and Julkunen-Tiitto, R. and Haggman, H.}, year={2014} } @article{li_gunasekara_guo_zhang_lei_tunlaya-anukit_busov_chiang_wei_2014, title={Pop's Pipes: Poplar gene expression data analysis pipelines}, volume={10}, DOI={10.1007/s11295-014-0745-x}, number={4}, journal={Tree Genetics & Genomes}, author={Li, X. and Gunasekara, C. and Guo, Y. F. and Zhang, H. and Lei, L. and Tunlaya-Anukit, S. and Busov, V. and Chiang, V. and Wei, H. R.}, year={2014}, pages={1093–1101} } @article{chen_song_wang_lin_ducoste_shuford_liu_li_shi_nepomuceno_et al._2014, title={Systems Biology of Lignin Biosynthesis in Populus trichocarpa: Heteromeric 4-Coumaric Acid:Coenzyme A Ligase Protein Complex Formation, Regulation, and Numerical Modeling}, volume={26}, ISSN={1040-4651 1532-298X}, url={http://dx.doi.org/10.1105/tpc.113.119685}, DOI={10.1105/tpc.113.119685}, number={3}, journal={The Plant Cell}, publisher={Oxford University Press (OUP)}, author={Chen, Hsi-Chuan and Song, Jina and Wang, Jack P. and Lin, Ying-Chung and Ducoste, Joel and Shuford, Christopher M. and Liu, Jie and Li, Quanzi and Shi, Rui and Nepomuceno, Angelito and et al.}, year={2014}, month={Mar}, pages={876–893} } @article{min_li_chiang_jameel_chang_lucia_2014, title={The influence of lignin-carbohydrate complexes on the cellulase-mediated saccharification I: Transgenic black cottonwood (western balsam poplar, California poplar) P-trichocarpa including the xylan down-regulated and the lignin down-regulated lines}, volume={119}, DOI={10.1016/j.fuel.2013.11.047}, journal={Fuel}, author={Min, D. Y. and Li, Q. Z. and Chiang, V. and Jameel, H. and Chang, H. M. and Lucia, Lucian}, year={2014}, pages={207–213} } @article{min_yang_chiang_jameel_chang_2014, title={The influence of lignin-carbohydrate complexes on the cellulase-mediated saccharification II: Transgenic hybrid poplars (Populus nigra L. and Populus maximowiczii A.)}, volume={116}, DOI={10.1016/j.fuel.2013.07.046}, journal={Fuel}, author={Min, D. Y. and Yang, C. M. and Chiang, V. and Jameel, H. and Chang, H. M.}, year={2014}, pages={56–62} } @article{kafle_shi_lee_mittal_park_sun_park_chiang_kim_2014, title={Vibrational sum-frequency-generation (SFG) spectroscopy study of the structural assembly of cellulose microfibrils in reaction woods}, volume={21}, DOI={10.1007/s10570-014-0322-3}, number={4}, journal={Cellulose}, author={Kafle, K. and Shi, R. and Lee, C. M. and Mittal, A. and Park, Y. B. and Sun, Y. H. and Park, Sunkyu and Chiang, V. and Kim, S. H.}, year={2014}, pages={2219–2231} } @article{umezawa_ragamustari_nakatsubo_wada_li_yamamura_sakakibara_hattori_suzuki_chiang_2013, title={A lignan O-methyltransferase catalyzing the regioselective methylation of matairesinol in Carthamus tinctorius}, volume={30}, DOI={10.5511/plantbiotechnology.12.1230a}, number={2}, journal={Plant Biotechnology}, author={Umezawa, T. and Ragamustari, S. K. and Nakatsubo, T. and Wada, S. and Li, L. G. and Yamamura, M. and Sakakibara, N. and Hattori, T. and Suzuki, S. and Chiang, V. L.}, year={2013}, pages={97–109} } @article{liu_peng_li_sun_chiang_sederoff_2013, title={High-level gene expression in differentiating xylem of tobacco driven by a 2.0 kb Poplar COMT2 promoter and a 4 x 35S enhancer}, volume={30}, DOI={10.5511/plantbiotechnology.13.0213a}, number={2}, journal={Plant Biotechnology}, author={Liu, E. Y. and Peng, S. B. and Li, Q. Z. and Sun, Y. H. and Chiang, V. L. and Sederoff, R. R.}, year={2013}, pages={191–198} } @article{chen_song_williams_shuford_liu_wang_li_shi_gokce_ducoste_et al._2013, title={Monolignol pathway 4-coumaric acid: Coenzyme A ligases in populus trichocarpa: Novel specificity, metabolic regulation, and simulation of coenzyme a ligation fluxes}, volume={161}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84874626790&partnerID=MN8TOARS}, DOI={10.1104/pp.112.210971}, number={3}, journal={Plant Physiology}, author={Chen, H. C. and Song, J. N. and Williams, C. M. and Shuford, C. M. and Liu, J. and Wang, Jack P. and Li, Q. Z. and Shi, R. and Gokce, E. and Ducoste, J. and et al.}, year={2013}, pages={1501–1516} } @article{lu_li_wei_chang_tunlaya-anukit_kim_liu_song_sun_yuan_et al._2013, title={Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa}, volume={110}, ISSN={0027-8424 1091-6490}, url={http://dx.doi.org/10.1073/PNAS.1308936110}, DOI={10.1073/pnas.1308936110}, number={26}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Lu, S. and Li, Q. and Wei, H. and Chang, M.-J. and Tunlaya-Anukit, S. and Kim, H. and Liu, J. and Song, J. and Sun, Y.-H. and Yuan, L. and et al.}, year={2013}, month={Jun}, pages={10848–10853} } @article{shi_shuford_wang_sun_yang_chen_tunlaya-anukit_li_liu_muddiman_et al._2013, title={Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa}, volume={238}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84882877816&partnerID=MN8TOARS}, DOI={10.1007/s00425-013-1905-1}, number={3}, journal={Planta}, author={Shi, R. and Shuford, C. M. and Wang, Jack P. and Sun, Y. H. and Yang, Z. C. and Chen, H. C. and Tunlaya-Anukit, S. and Li, Q. Z. and Liu, J. and Muddiman, David and et al.}, year={2013}, pages={487–497} } @article{lin_li_sun_kumari_wei_li_tunlaya-anukit_sederoff_chiang_2013, title={SND1 transcription factor-directed quantitative functional hierarchical genetic regulatory network in wood formation in Populus trichocarpa}, volume={25}, DOI={10.1105/tpc.113.117697}, number={11}, journal={Plant Cell}, author={Lin, Y. C. and Li, W. and Sun, Y. H. and Kumari, S. and Wei, H. R. and Li, Q. Z. and Tunlaya-Anukit, S. and Sederoff, R. R. and Chiang, V. L.}, year={2013}, pages={4324–4341} } @article{albert_barbazuk_depamphilis_der_leebens-mack_ma_palmer_rounsley_sankoff_schuster_et al._2013, title={The Amborella Genome and the Evolution of Flowering Plants}, volume={342}, url={http://science.sciencemag.org/content/342/6165/1241089.long}, DOI={10.1126/science.1241089}, number={6165}, journal={Science}, author={Albert, V. A. and Barbazuk, W. B. and dePamphilis, C. W. and Der, J. P. and Leebens-Mack, J. and Ma, H. and Palmer, J. D. and Rounsley, S. and Sankoff, D. and Schuster, S. C. and et al.}, year={2013}, month={Dec}, pages={1456–1457} } @article{min_yang_shi_jameel_chiang_chang_2013, title={The elucidation of the lignin structure effect on the cellulase-mediated saccharification by genetic engineering poplars (Populus nigra L. x Populus maximowiczii A.)}, volume={58}, DOI={10.1016/j.biombioe.2013.08.019}, journal={Biomass and Bioenergy}, author={Min, D. Y. and Yang, C. M. and Shi, R. and Jameel, H. and Chiang, V. and Chang, H. M.}, year={2013}, pages={52–57} } @article{loziuk_wang_li_sederoff_chiang_muddiman_2013, title={Understanding the role of proteolytic digestion on discovery and targeted proteomic measurements using liquid chromatography tandem mass spectrometry and design of experiments}, volume={12}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84890109136&partnerID=MN8TOARS}, DOI={10.1021/pr4008442}, number={12}, journal={Journal of Proteome Research}, author={Loziuk, P. L. and Wang, Jack P. and Li, Q. Z. and Sederoff, R. R. and Chiang, V. L. and Muddiman, David}, year={2013}, pages={5820–5829} } @article{liu_shi_li_sederoff_chiang_2012, title={A standard reaction condition and a single HPLC separation system are sufficient for estimation of monolignol biosynthetic pathway enzyme activities}, volume={236}, DOI={10.1007/s00425-012-1688-9}, number={3}, journal={Planta}, author={Liu, J. and Shi, R. and Li, Q. Z. and Sederoff, R. R. and Chiang, V. L.}, year={2012}, pages={879–885} } @article{shuford_li_sun_chen_wang_shi_sederoff_chiang_muddiman_2012, title={Comprehensive Quantification of Monolignol-Pathway Enzymes in Populus trichocarpa by Protein Cleavage Isotope Dilution Mass Spectrometry}, volume={11}, ISSN={1535-3893 1535-3907}, url={http://dx.doi.org/10.1021/pr300205a}, DOI={10.1021/pr300205a}, number={6}, journal={Journal of Proteome Research}, publisher={American Chemical Society (ACS)}, author={Shuford, Christopher M. and Li, Quanzi and Sun, Ying-Hsuan and Chen, Hsi-Chuan and Wang, Jack and Shi, Rui and Sederoff, Ronald. R. and Chiang, Vincent L. and Muddiman, David C.}, year={2012}, month={May}, pages={3390–3404} } @article{wang_shuford_li_song_lin_sun_chen_williams_muddiman_sederoff_et al._2012, title={Functional redundancy of the two 5-hydroxylases in monolignol biosynthesis of Populus trichocarpa: LC–MS/MS based protein quantification and metabolic flux analysis}, volume={236}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84865584315&partnerID=MN8TOARS}, DOI={10.1007/s00425-012-1663-5}, number={3}, journal={Planta}, publisher={Springer Science + Business Media}, author={Wang, Jack P. and Shuford, C. M. and Li, Q. Z. and Song, J. N. and Lin, Y. C. and Sun, Y. H. and Chen, H. C. and Williams, C. M. and Muddiman, David and Sederoff, R. R. and et al.}, year={2012}, pages={795–808} } @article{sun_shi_zhang_chiang_sederoff_2012, title={MicroRNAs in trees}, volume={80}, DOI={10.1007/s11103-011-9864-z}, number={1}, journal={Plant Molecular Biology}, author={Sun, Y. H. and Shi, R. and Zhang, X. H. and Chiang, V. L. and Sederoff, R. R.}, year={2012}, pages={37–53} } @article{shuford_sederoff_chiang_muddiman_2012, title={Peptide Production and Decay Rates Affect the Quantitative Accuracy of Protein Cleavage Isotope Dilution Mass Spectrometry (PC-IDMS)}, volume={11}, ISSN={1535-9476 1535-9484}, url={http://dx.doi.org/10.1074/mcp.O112.017145}, DOI={10.1074/mcp.O112.017145}, number={9}, journal={Molecular & Cellular Proteomics}, publisher={American Society for Biochemistry & Molecular Biology (ASBMB)}, author={Shuford, Christopher M. and Sederoff, Ronald R. and Chiang, Vincent L. and Muddiman, David C.}, year={2012}, month={May}, pages={814–823} } @article{perera_schmidt_chiang_schuck_adams_2012, title={Raman-spectroscopy-based noninvasive microanalysis of native lignin structure}, volume={402}, DOI={10.1007/s00216-011-5518-x}, number={2}, journal={Analytical and Bioanalytical Chemistry}, author={Perera, P. N. and Schmidt, M. and Chiang, V. L. and Schuck, P. J. and Adams, P. D.}, year={2012}, pages={983–987} } @article{li_lin_sun_song_chen_zhang_sederoff_chiang_2012, title={Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa}, volume={109}, DOI={10.1073/pnas.1212977109}, number={36}, journal={Proceedings of the National Academy of Sciences of the United States of America}, author={Li, Q. Z. and Lin, Y. C. and Sun, Y. H. and Song, J. and Chen, H. and Zhang, X. H. and Sederoff, R. R. and Chiang, V. L.}, year={2012}, pages={14699–14704} } @article{min_li_jameel_chiang_chang_2012, title={The cellulase-mediated saccharification on wood derived from transgenic low-lignin lines of black cottonwood (Populus trichocarpa)}, volume={168}, DOI={10.1007/s12010-012-9833-2}, number={4}, journal={Applied Biochemistry and Biotechnology}, author={Min, D. Y. and Li, Q. Z. and Jameel, H. and Chiang, V. and Chang, H. M.}, year={2012}, pages={947–955} } @inproceedings{min_li_yang_chang_chiang_jameel_2012, title={The effects of transgenic samples on the enzymatic saccharification}, booktitle={Proceeding of the 4th International Conference on Pulping, Papermaking and Biotechnology (ICPPB '12), vols. I and II}, author={Min, D. Y. and Li, Q. Z. and Yang, C. M. and Chang, H. M. and Chiang, V. and Jameel, H.}, year={2012}, pages={1058–1062} } @article{min_jameel_chiang_chang_2012, title={effect of lignin on enzymatic saccharification of hardwood after green liquor and sulfuric acid pretreatments}, volume={7}, DOI={10.15376/biores.7.2.2272-2283}, number={2}, journal={BioResources}, author={Min, D. Y. and Jameel, H. and Chiang, V. and Chang, H. M.}, year={2012}, pages={2272–2283} } @article{zhou_li_chiang_lucia_griffis_2011, title={Chemical and spatial differentiation of syringyl and guaiacyl lignins in poplar wood via time-of-flight secondary ion mass spectrometry}, volume={83}, DOI={10.1021/ac200903y}, number={18}, journal={Analytical Chemistry}, author={Zhou, C. Z. and Li, Q. Z. and Chiang, V. L. and Lucia, Lucian and Griffis, D. P.}, year={2011}, pages={7020–7026} } @article{min_li_jameel_chiang_chang_2011, title={Comparison of pretreatment protocols for cellulase-mediated saccharification of wood derived from transgenic low-xylan lines of cottonwood (P. trichocarpa)}, volume={35}, DOI={10.1016/j.biombioe.2011.04.034}, number={8}, journal={Biomass and Bioenergy}, author={Min, D. Y. and Li, Q. Z. and Jameel, H. and Chiang, V. and Chang, H. M.}, year={2011}, pages={3514–3521} } @article{lu_yang_chiang_2011, title={Conservation and diversity of MicroRNA-associated copper-regulatory networks in Populus trichocarpa}, volume={53}, DOI={10.1111/j.1744-7909.2011.01080.x}, number={11}, journal={Journal of Integrative Plant Biology}, author={Lu, S. F. and Yang, C. M. and Chiang, V. L.}, year={2011}, pages={879–891} } @article{li_min_wang_peszlen_horvath_horvath_nishimura_jameel_chang_chiang_2011, title={Down-regulation of glycosyltransferase 8D genes in Populus trichocarpa caused reduced mechanical strength and xylan content in wood}, volume={31}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-79953831391&partnerID=MN8TOARS}, DOI={10.1093/treephys/tpr008}, number={2}, journal={Tree Physiology}, publisher={Oxford University Press (OUP)}, author={Li, Q. Z. and Min, D. Y. and Wang, J. P. Y. and PESZLEN, ILONA and Horvath, L. and Horvath, B. and Nishimura, Y. and Jameel, H. and Chang, H. M. and Chiang, V. L.}, year={2011}, pages={226–236} } @article{roque-rivera_talhelm_johnson_chiang_pregitzer_2011, title={Effects of lignin-modified Populus tremuloides on soil organic carbon}, volume={174}, DOI={10.1002/jpln.201000445}, number={5}, journal={Journal of Plant Nutrition and Soil Science}, author={Roque-Rivera, R. and Talhelm, A. F. and Johnson, D. W. and Chiang, V. L. and Pregitzer, K. S.}, year={2011}, pages={818–826} } @article{chen_li_shuford_liu_muddiman_sederoff_chiang_2011, title={Membrane protein complexes catalyze both 4-and 3-hydroxylation of cinnamic acid derivatives in monolignol biosynthesis}, volume={108}, DOI={10.1073/pnas.1116416109}, number={52}, journal={Proceedings of the National Academy of Sciences of the United States of America}, author={Chen, H. C. and Li, Q. Z. and Shuford, C. M. and Liu, J. and Muddiman, David and Sederoff, R. R. and Chiang, V. L.}, year={2011}, pages={21253–21258} } @article{novaes_kirst_chiang_winter-sederoff_sederoff_2010, title={Lignin and biomass: A negative correlation for wood formation and lignin content in trees}, volume={154}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-77957730551&partnerID=MN8TOARS}, DOI={10.1104/pp.110.161281}, number={2}, journal={Plant Physiology}, author={Novaes, E. and Kirst, M. and Chiang, V. and Winter-Sederoff, H. and Sederoff, R.}, year={2010}, pages={555–561} } @article{suzuki_sakakibara_li_umezawa_chiang_2010, title={Profiling of phenylpropanoid monomers in developing xylem tissue of transgenic aspen (Populus tremuloides)}, volume={56}, DOI={10.1007/s10086-009-1059-8}, number={1}, journal={Journal of Wood Science}, author={Suzuki, S. and Sakakibara, N. and Li, L. G. and Umezawa, T. and Chiang, V. L.}, year={2010}, pages={71–76} } @article{shi_yang_lu_sederoff_chiang_2010, title={Specific down-regulation of PAL genes by artificial microRNAs in Populus trichocarpa}, volume={232}, DOI={10.1007/s00425-010-1253-3}, number={6}, journal={Planta}, author={Shi, R. and Yang, C. M. and Lu, S. F. and Sederoff, R. and Chiang, V. L.}, year={2010}, pages={1281–1288} } @article{shi_sun_li_heber_sederoff_chiang_2010, title={Towards a systems approach for lignin biosynthesis in populus trichocarpa: transcript abundance and specificity of the monolignol biosynthetic genes}, volume={51}, DOI={10.1093/pcp/pcp175}, number={1}, journal={Plant and Cell Physiology}, author={Shi, R. and Sun, Y. H. and Li, Q. Z. and Heber, Steffen and Sederoff, R. and Chiang, V. L.}, year={2010}, pages={144–163} } @article{lu_sun_chiang_2009, title={Adenylation of plant miRNAs}, volume={37}, DOI={10.1093/nar/gkp031}, number={6}, journal={Nucleic Acids Research}, author={Lu, S. F. and Sun, Y. H. and Chiang, V. L.}, year={2009}, pages={1878–1885} } @misc{kumar_thammannagowda_bulone_chiang_han_joshi_mansfield_mellerowicz_sundberg_teeri_et al._2009, title={An update on the nomenclature for the cellulose synthase genes in Populus}, volume={14}, DOI={10.1016/j.tplants.2009.02.004}, number={5}, journal={Trends in Plant Science}, author={Kumar, M. and Thammannagowda, S. and Bulone, V. and Chiang, V. and Han, K. H. and Joshi, C. P. and Mansfield, S. D. and Mellerowicz, E. and Sundberg, B. and Teeri, T. and et al.}, year={2009}, pages={248–254} } @article{osakabe_osakabe_chiang_2009, title={Characterization of the tissue-specific expression of phenylalanine ammonia-lyase gene promoter from loblolly pine (Pinus taeda) in Nicotiana tabacum}, volume={28}, DOI={10.1007/s00299-009-0707-1}, number={9}, journal={Plant Cell Reports}, author={Osakabe, Y. and Osakabe, K. and Chiang, V. L.}, year={2009}, pages={1309–1317} } @article{osakabe_osakabe_chiang_2009, title={Isolation of 4-coumarate Co-A ligase gene promoter from loblolly pine (Pinus taeda) and characterization of tissue-specific activity in transgenic tobacco}, volume={47}, DOI={10.1016/j.plaphy.2009.09.003}, number={11-12}, journal={Plant Physiology and Biochemistry}, author={Osakabe, Y. and Osakabe, K. and Chiang, V. L.}, year={2009}, pages={1031–1036} } @article{schmidt_schwartzberg_perera_weber-bargioni_carroll_sarkar_bosneaga_urban_song_balakshin_et al._2009, title={Label-free in situ imaging of lignification in the cell wall of low lignin transgenic Populus trichocarpa}, volume={230}, DOI={10.1007/s00425-009-0963-x}, number={3}, journal={Planta}, author={Schmidt, M. and Schwartzberg, A. M. and Perera, P. N. and Weber-Bargioni, A. and Carroll, A. and Sarkar, P. and Bosneaga, E. and Urban, J. J. and Song, J. and Balakshin, M. Y. and et al.}, year={2009}, pages={589–597} } @article{sutela_niemi_edesi_laakso_saranpaa_vuosku_makela_tiimonen_chiang_koskimaki_et al._2009, title={Phenolic compounds in ectomycorrhizal interaction of lignin modified silver birch}, volume={9}, DOI={10.1186/1471-2229-9-124}, journal={BMC Plant Biology}, author={Sutela, S. and Niemi, K. and Edesi, J. and Laakso, T. and Saranpaa, P. and Vuosku, J. and Makela, R. and Tiimonen, H. and Chiang, V. L. and Koskimaki, J. and et al.}, year={2009} } @article{yeh_wang_rui_sun_chiang_2008, title={A novel O-Methyltransferase-like gene with a drastic extopic expression in response to tension wood formation in Poupulus trichocarpa}, volume={41}, number={9-10}, journal={Cellulose Chemistry and Technology}, author={Yeh, T. F. and Wang, J. and Rui, S. and Sun, Y. H. and Chiang, V. L.}, year={2008}, pages={521–528} } @article{lu_li_yi_joshi_chiang_2008, title={Differential expression of three eucalyptus secondary cell wall-related cellulose synthase genes in response to tension stress}, volume={59}, DOI={10.1093/jxb/erm350}, number={3}, journal={Journal of Experimental Botany}, author={Lu, S. F. and Li, L. G. and Yi, X. P. and Joshi, C. P. and Chiang, V. L.}, year={2008}, pages={681–695} } @article{tiimonen_aronen_laakso_saranpaa_chiang_haggman_niemi_2008, title={Paxillus involutus forms an ectomycorrhizal symbiosis and enhances survival of PtCOMT-modified Betula pendula in vitro}, volume={57}, DOI={10.1515/sg-2008-0036}, number={4-5}, journal={Silvae Genetica}, author={Tiimonen, H. and Aronen, T. and Laakso, T. and Saranpaa, P. and Chiang, V. and Haggman, H. and Niemi, K.}, year={2008}, pages={235–242} } @article{nakatsubo_li_hattori_lu_sakakibara_chiang_shimada_suzuki_umezawa_2008, title={Roles of 5-hydroxyconiferylaldehyde and caffeoyl CoA O-methyltransferases in monolignol biosynthesis in Carthamus tinctorius}, volume={41}, number={9-10}, journal={Cellulose Chemistry and Technology}, author={Nakatsubo, T. and Li, L. and Hattori, T. and Lu, S. and Sakakibara, N. and Chiang, V. L. and Shimada, M. and Suzuki, S. and Umezawa, T.}, year={2008}, pages={511–520} } @article{lu_sun_chiang_2008, title={Stress-responsive microRNAs in Populus}, volume={55}, DOI={10.1111/j.1365-313X.2008.03497.x}, number={1}, journal={Plant Journal}, author={Lu, S. F. and Sun, Y. H. and Chiang, V. L.}, year={2008}, pages={131–151} } @misc{lu_sun_amerson_chiang_2007, title={MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development}, volume={51}, DOI={10.1111/j.1365-313x.2007.03208.x}, number={6}, journal={Plant Journal}, author={Lu, S. F. and Sun, Y. H. and Amerson, H. and Chiang, V. L.}, year={2007}, pages={1077–1098} } @inproceedings{keshwani_cheng_li_burns_chiang_2007, title={Microwave pretreatment of switchgrass to enhance enzymatic hydrolysis}, volume={077127}, DOI={10.13031/2013.23472}, booktitle={Proceedings of the ASABE Annual International Meeting (Minneapolis, Minnesota)}, author={Keshwani, D. R. and Cheng, J. J. and Li, L. and Burns, J. C. and Chiang, V.}, year={2007} } @article{hancock_loya_giardina_li_chiang_pregitzer_2007, title={Plant growth, biomass partitioning and soil carbon formation in response to altered lignin biosynthesis in Populus tremuloides}, volume={173}, DOI={10.1111/j.1469-8137.2006.01965.x}, number={4}, journal={New Phytologist}, author={Hancock, J. E. and Loya, W. M. and Giardina, C. P. and Li, L. G. and Chiang, V. L. and Pregitzer, K. S.}, year={2007}, pages={732–742} } @article{tiimonen_haggman_tsai_chiang_aronen_2007, title={The seasonal activity and the effect of mechanical bending and wounding on the PtCOMT promoter in Betula pendula Roth}, volume={26}, DOI={10.1007/s00299-007-0331-x}, number={8}, journal={Plant Cell Reports (Online)}, author={Tiimonen, H. and Haggman, H. and Tsai, C. J. and Chiang, V. and Aronen, T.}, year={2007}, pages={1205–1214} } @article{li_lu_chiang_2006, title={A genomic and molecular view of wood formation}, volume={25}, DOI={10.1080/07352680600611519}, number={3}, journal={Critical Reviews in Plant Sciences}, author={Li, L. G. and Lu, S. F. and Chiang, V.}, year={2006}, pages={215–233} } @article{lu_zhou_li_chiang_2006, title={Distinct roles of cinnamate 4-hydroxylase genes in Populus}, volume={47}, DOI={10.1093/pcp/pcj063}, number={7}, journal={Plant and Cell Physiology}, author={Lu, S. F. and Zhou, Y. H. and Li, L. G. and Chiang, V. L.}, year={2006}, pages={905–914} } @article{song_lu_chen_lourenco_chiang_2006, title={Genetic transformation of Populus trichocarpa genotype Nisqually-1: A functional genomic tool for woody plants}, volume={47}, DOI={10.1093/pcp/pcl018}, number={11}, journal={Plant and Cell Physiology}, author={Song, J. Y. and Lu, S. F. and Chen, Z. Z. and Lourenco, R. and Chiang, V. L.}, year={2006}, pages={1582–1589} } @article{chiang_2006, title={Monolignol biosynthesis and genetic engineering of lignin in trees, a review}, volume={4}, DOI={10.1007/s10311-006-0067-9}, number={3}, journal={Environmental Chemistry Letters}, author={Chiang, V. L.}, year={2006}, pages={143–146} } @article{yamada_yeh_chang_li_kadla_chiang_2006, title={Rapid analysis of transgenic trees using transmittance near-infrared spectroscopy (NIR)}, volume={60}, DOI={10.1515/HF.2006.005}, number={1}, journal={Holzforschung}, author={Yamada, T. and Yeh, T. F. and Chang, H. M. and Li, L. G. and Kadla, J. F. and Chiang, V. L.}, year={2006}, pages={24–28} } @article{suzuki_li_sun_chiang_2006, title={The cellulose synthase gene superfamily and biochemical functions of xylem-specific cellulose synthase-like genes in Populus trichocarpa}, volume={142}, DOI={10.1104/pp.106.086678}, number={3}, journal={Plant Physiology}, author={Suzuki, S. and Li, L. G. and Sun, Y. H. and Chiang, V. L.}, year={2006}, pages={1233–1245} } @article{li_cheng_lu_nakatsubo_umezawa_chiang_2005, title={Clarification of cinnamoyl co-enzyme A reductase catalysis in monolignol biosynthesis of aspen}, volume={46}, ISBN={0032-0781}, DOI={10.1093/pcp/pci120}, number={7}, journal={Plant and Cell Physiology}, author={Li, L. G. and Cheng, X. F. and Lu, S. F. and Nakatsubo, T. and Umezawa, T. and Chiang, V. L.}, year={2005}, pages={1073–1082} } @article{tiimonen_aronen_laakso_saranpaa_chiang_ylioja_roininen_haggman_2005, title={Does lignin modification affect feeding preference or growth performance of insect herbivores in transgenic silver birch (Betula pendula Roth)?}, volume={222}, DOI={10.1007/s00425-005-0002-5}, number={4}, journal={Planta (Online)}, author={Tiimonen, H. and Aronen, T. and Laakso, T. and Saranpaa, P. and Chiang, V. and Ylioja, T. and Roininen, H. and Haggman, H.}, year={2005}, pages={699–708} } @article{shi_chiang_2005, title={Facile means for quantifying microRNA expression by real-time PCR}, volume={39}, DOI={10.2144/000112010}, number={4}, journal={Biotechniques}, author={Shi, R. and Chiang, V. L.}, year={2005}, pages={519–525} } @misc{chiang_li_2005, title={Methods for simultaneous control of lignin content and composition, and cellulose content in plants}, volume={6855864}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Chiang, V. L. C. and Li, L.}, year={2005} } @article{lu_sun_shi_clark_li_chiang_2005, title={Novel and mechanical stress-responsive microRNAs in Populus trichocarpa that are absent from Arabidopsis}, volume={17}, DOI={10.1105/tpc.105.033456}, number={8}, journal={Plant Cell}, author={Lu, S. F. and Sun, Y. H. and Shi, R. and Clark, C. and Li, L. G. and Chiang, V. L.}, year={2005}, pages={2186–2203} } @article{yeh_yamada_capanema_chang_chiang_kadla_2005, title={Rapid screening of wood chemical component variations using transmittance near-infrared spectroscopy}, volume={53}, DOI={10.1021/jf0480647}, number={9}, journal={Journal of Agricultural and Food Chemistry}, author={Yeh, T. F. and Yamada, T. and Capanema, E. and Chang, H. M. and Chiang, V. and Kadla, J. F.}, year={2005}, pages={3328–3332} } @misc{chiang_li_2004, title={Genetic engineering of syringyl-enriched lignin in plants}, volume={6812377}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Chiang, V. L. C. and Li, L.}, year={2004} } @article{lu_shi_tsao_yi_li_chiang_2004, title={RNA silencing in plants by the expression of siRNA duplexes}, volume={32}, DOI={10.1093/nar/gnh170}, number={21}, journal={Nucleic Acids Research}, author={Lu, S. F. and Shi, R. and Tsao, C. C. and Yi, X. P. and Li, L. G. and Chiang, V. L.}, year={2004}, pages={171} } @article{li_zhou_cheng_sun_marita_ralph_chiang_2003, title={Combinatorial modification of multiple lignin traits in trees through multigene cotransformation}, volume={100}, DOI={10.1073/pnas.0831166100}, number={8}, journal={Proceedings of the National Academy of Sciences of the United States of America}, author={Li, L. and Zhou, Y. and Cheng, X.F. and Sun, J. and Marita, J. and Ralph, J. and Chiang, V.L.}, year={2003}, pages={4939–4944} } @article{harding_leshkevich_chiang_tsai_2002, title={Differential substrate inhibition couples kinetically distinct 4-coumarate: Coenzyme A ligases with spatially distinct metabolic roles in quaking aspen}, volume={128}, DOI={10.1104/pp.010603}, number={2002}, journal={Plant Physiology}, author={Harding, S. A. and Leshkevich, J. and Chiang, V. L. and Tsai, C. J.}, year={2002}, pages={428–438} } @article{chiang_2002, title={From rags to riches}, volume={20}, DOI={10.1038/nbt0602-557}, number={6}, journal={Nature Biotechnology}, author={Chiang, V.L.}, year={2002}, pages={557–558} } @misc{chiang_tsai_hu_2002, title={Methods of modifying lignin in plants by transformation with a 4-coumarate coenzyme a ligase nucleic acid}, volume={6455762}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Chiang, V. L. and Tsai, C.-J. and Hu, W.-J.}, year={2002} } @misc{chiang_tsai_podila_1999, title={Genetic engineering of wood color in plants}, volume={5886243}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Chiang, V. L. and Tsai, C. J. and Podila, G. K.}, year={1999} }