Ron Ross Sederoff
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Works (135)
2026 article
Integrating scRNA-seq and snRNA-seq with spatial transcriptomics to unlock the xylem puzzle
Wei, M., Hsieh, J.-W. A., Tong, B., Li, H., Sederoff, R., Lin, Y.-C. J., & Li, Q. (2026, February 23). Genome Biology.
open access via doi.org (publisher)2025 article
Qu-1: a transformation-and regeneration-amenable doubled haploid cell line with a reference genome sequence for genetic and functional studies in <i>Populus</i>
Liu, C., Wang, M., Fan, E., Wang, S., Li, S., Fu, P., … Qu, G. (2025, January 1). Forestry Research.
2024 article
A nearly gapless, highly contiguous reference genome for a doubled haploid line of <i>Populus ussuriensis</i>, enabling advanced genomic studies
Liu, W., Liu, C., Chen, S., Wang, M., Wang, X., Yu, Y., … Chen, S. (2024, January 1). Forestry Research.
2023 article
Chromosome‐level genome assembly of a triploid poplar Populus alba ‘Berolinensis’
Chen, S., Chen, S., Yu, Y., Wang, X., Wang, S., Zhang, T., … Chen, S. (2023, February 15). Chromosome‐level genome assembly of a triploid poplar Populus alba ‘Berolinensis.’ Molecular Ecology Resources.
2023 article
Multiplex CRISPR editing of wood for sustainable fiber production
Sulis, D. B., Jiang, X., Yang, C., Marques, B. M., Matthews, M. L., Miller, Z., … Wang, J. P. (2023, July 13). Science, Vol. 381, pp. 216-+.
Contributors: D. Sulis n, C. Yang n, B. Liu n, n, V. Chiang n, R. Barrangou n , J. Wang n , B. Marques n
2023 article
Overexpression of a gibberellin 20-oxidase gene in poplar xylem led to an increase in the size of nanocellulose fibrils and improved paper properties
Peng, X., Tong, B., Lee, J., Wang, K., Yu, X., Huang, X., … Li, Q. (2023, April 27). Carbohydrate Polymers.
2022 article
Chromosome-Level Genome Assembly for Acer pseudosieboldianum and Highlights to Mechanisms for Leaf Color and Shape Change
Li, X., Cai, K., Han, Z., Zhang, S., Sun, A., Xie, Y., … Zhao, X. (2022, March 3). Frontiers in Plant Science.
2022 article
Genome-wide identification of the AlkB homologs gene family, PagALKBH9B and PagALKBH10B regulated salt stress response in Populus
Zhao, Y., Guo, Q., Cao, S., Tian, Y., Han, K., Sun, Y., … Li, Y. (2022, September 20). Frontiers in Plant Science.
2022 article
Morphological and Comparative Transcriptome Analysis of Three Species of Five-Needle Pines: Insights Into Phenotypic Evolution and Phylogeny
Li, X., Cai, K., Zhao, Q., Li, H., Wang, X., Tigabu, M., … Zhao, X. (2022, February 10). Frontiers in Plant Science.
2022 article
The Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis
Li, X., Cai, K., Zhang, Q., Pei, X., Chen, S., Jiang, L., … Zhao, X. (2022, January 1). GigaScience.
2022 article
The double flower variant of yellowhorn is due to a LINE1 transposon-mediated insertion
Wang, H., Lu, Y., Zhang, T., Liu, Z., Cao, L., Chang, Q., … Zheng, Z. (2022, December 10). PLANT PHYSIOLOGY, Vol. 12.
2022 article
The flying spider-monkey tree fern genome provides insights into fern evolution and arborescence
Huang, X., Wang, W., Gong, T., Wickell, D., Kuo, L.-Y., Zhang, X., … Li, Q. (2022, May 9). Nature Plants.
2022 article
Ubiquitinated DA1 negatively regulates vascular cambium activity through modulating the stability of WOX4 in Populus
Tang, X., Wang, C., Chai, G., Wang, D., Xu, H., Liu, Y., … Zhou, G. (2022, June 15). The Plant Cell.
2021 article
An Overview of the Practices and Management Methods for Enhancing Seed Production in Conifer Plantations for Commercial Use
Li, Y., Li, X., Zhao, M.-H., Pang, Z.-Y., Wei, J.-T., Tigabu, M., … Sederoff, R. (2021, August 18). Horticulturae.
2021 article
BEL1-like Homeodomain Protein BLH6a Is a Negative Regulator of CAld5H2 in Sinapyl Alcohol Monolignol Biosynthesis in Poplar
Wang, Q., Dai, X., Pang, H., Cheng, Y., Huang, X., Li, H., … Li, Q. (2021, June 25). Frontiers in Plant Science.
2021 article
Corrigendum: BEL1-like Homeodomain Protein BLH6a Is a Negative Regulator of CAld5H2 in Sinapyl Alcohol Monolignol Biosynthesis in Poplar
Wang, Q., Dai, X., Pang, H., Cheng, Y., Huang, X., Li, H., … Li, Q. (2021, September 9). Frontiers in Plant Science.
2021 article
Enzyme Complexes of Ptr4CL and PtrHCT Modulate Co-enzyme A Ligation of Hydroxycinnamic Acids for Monolignol Biosynthesis in Populus trichocarpa
Lin, C.-Y., Sun, Y., Song, J., Chen, H.-C., Shi, R., Yang, C., … Chiang, V. L. (2021, October 6). Frontiers in Plant Science, Vol. 12.
2021 article
Epigenetic modification associated with climate regulates betulin biosynthesis in birch
Wang, J., Chen, B., Ali, S., Zhang, T., Wang, Y., Zhang, H., … Zhang, Q. (2021, December 4). Journal of Forestry Research, Vol. 12.
2021 article
MYB-Mediated Regulation of Anthocyanin Biosynthesis
Yan, H., Pei, X., Zhang, H., Li, X., Zhang, X., Zhao, M., … Zhao, X. (2021, March 18). International Journal of Molecular Sciences.
2021 article
Molecular and Metabolic Insights into Anthocyanin Biosynthesis for Leaf Color Change in Chokecherry (Padus virginiana)
Li, X., Li, Y., Zhao, M., Hu, Y., Meng, F., Song, X., … Zhao, X. (2021, October 2). International Journal of Molecular Sciences.
2021 article
Single‐cell RNA sequencing reveals a high‐resolution cell atlas of xylem in Populus
Li, H., Dai, X., Huang, X., Xu, M., Wang, Q., Yan, X., … Li, Q. (2021, August 4). Journal of Integrative Plant Biology.
2020 article
A multiscale model of lignin biosynthesis for predicting bioenergy traits in Populus trichocarpa
Matthews, M. L., Wang, J. P., Sederoff, R., Chiang, V. L., & Williams, C. M. (2020, December 3). Computational and Structural Biotechnology Journal, Vol. 19, pp. 168–182.
Contributors: M. Matthews *, J. Wang n , V. Chiang n, n & C. Williams n
2020 article
Microbial Interactions Within Multiple-Strain Biological Control Agents Impact Soil-Borne Plant Disease
Niu, B., Wang, W., Yuan, Z., Sederoff, R. R., Sederoff, H., Chiang, V. L., & Borriss, R. (2020, October 9). Frontiers in Microbiology, Vol. 11.
Contributors: B. Niu *, W. Wang*, Z. Yuan*, n, H. Sederoff n , V. Chiang n, R. Borriss *
2020 article
Qu-2, a robust poplar suspension cell line for molecular biology
Liu, C., Li, K., Wang, M., Fan, E., Yang, C., Wang, J., … Qu, G. (2020, December 6). Journal of Forestry Research.
2019 article
Editorial: Forest Genomics and Biotechnology
Allona, I., Kirst, M., Boerjan, W., Strauss, S., & Sederoff, R. (2019, October 11). Frontiers in Plant Science.
2019 article
Enzyme-Enzyme Interactions in Monolignol Biosynthesis
Wang, J. P., Liu, B., Sun, Y., Chiang, V. L., & Sederoff, R. R. (2019, January 11). Frontiers in Plant Science, Vol. 9.
2018 article
CAD1 and CCR2 protein complex formation in monolignol biosynthesis in Populus trichocarpa
Yan, X., Liu, J., Kim, H., Liu, B., Huang, X., Yang, Z., … Chiang, V. L. (2018, October 2). New Phytologist, Vol. 222, pp. 244–260.
2018 journal article
Assessing the impact of the 4CL enzyme complex on the robustness of monolignol biosynthesis using metabolic pathway analysis
PLOS ONE, 13(3), e0193896.
Contributors: P. Naik n, J. Wang n , n, V. Chiang n, C. Williams n & J. Ducoste n
Ed(s): D. Cullen
2018 journal article
Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis
Nature Communications, 9(1), 1579.
Contributors: J. Wang n , M. Matthews n, C. Williams n , R. Shi n, C. Yang n, S. Tunlaya-Anukit n, H. Chen n, Q. Li *
2017 article
Reciprocal cross-regulation of VND and SND multigene TF families for wood formation in Populus trichocarpa
Lin, Y.-C. J., Chen, H., Li, Q., Li, W., Wang, J. P., Shi, R., … Chiang, V. L. (2017, October 23). Proceedings of the National Academy of Sciences, Vol. 11, pp. E9722–E9729.
2017 article
Tissue and cell-type co-expression networks of transcription factors and wood component genes in Populus trichocarpa
Shi, R., Wang, J. P., Lin, Y.-C., Li, Q., Sun, Y.-H., Chen, H., … Chiang, V. L. (2017, January 12). Planta, Vol. 245, pp. 927–938.
2016 journal article
A cell wall-bound anionic peroxidase, PtrPO21, is involved in lignin polymerization in Populus trichocarpa
Tree Genetics & Genomes, 12(2).
2015 article
4-Coumaroyl and Caffeoyl Shikimic Acids Inhibit 4-Coumaric Acid:Coenzyme A Ligases and Modulate Metabolic Flux for 3-Hydroxylation in Monolignol Biosynthesis of Populus trichocarpa
Lin, C.-Y., Wang, J. P., Li, Q., Chen, H.-C., Liu, J., Loziuk, P., … Chiang, V. L. (2015, January 1). Molecular Plant, Vol. 8, pp. 176–187.
2015 article
Elucidation of Xylem-Specific Transcription Factors and Absolute Quantification of Enzymes Regulating Cellulose Biosynthesis in Populus trichocarpa
Loziuk, P. L., Parker, J., Li, W., Lin, C.-Y., Wang, J. P., Li, Q., … Muddiman, D. C. (2015, August 27). Journal of Proteome Research, Vol. 14, pp. 4158–4168.
Contributors: P. Loziuk n, J. Parker n, W. Li n, C. Lin n, J. Wang n , Q. Li *, n, V. Chiang n, D. Muddiman n
2015 journal article
Phosphorylation is an on/off switch for 5-hydroxyconiferaldehyde O-methyltransferase activity in poplar monolignol biosynthesis
Proceedings of the National Academy of Sciences, 112(27), 8481–8486.
2014 article
A robust chromatin immunoprecipitation protocol for studying transcription factor–DNA interactions and histone modifications in wood-forming tissue
Li, W., Lin, Y.-C., Li, Q., Shi, R., Lin, C.-Y., Chen, H., … Chiang, V. L. (2014, August 21). Nature Protocols.
2014 article
A simple improved-throughput xylem protoplast system for studying wood formation
Lin, Y.-C., Li, W., Chen, H., Li, Q., Sun, Y.-H., Shi, R., … Chiang, V. L. (2014, August 21). Nature Protocols, Vol. 9, pp. 2194–2205.
2014 article
Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
Neale, D. B., Wegrzyn, J. L., Stevens, K. A., Zimin, A. V., Puiu, D., Crepeau, M. W., … Langley, C. H. (2014, March 4). Genome Biology, Vol. 15.
2014 article
Establishing ion ratio thresholds based on absolute peak area for absolute protein quantification using protein cleavage isotope dilution mass spectrometry
Loziuk, P. L., Sederoff, R. R., Chiang, V. L., & Muddiman, D. C. (2014, January 1). The Analyst, Vol. 139, pp. 5439–5450.
2014 article
Populus trichocarpa
Li, Q., Yeh, T.-F., Yang, C., Song, J., Chen, Z.-Z., Sederoff, R. R., & Chiang, V. L. (2014, September 20). Methods in Molecular Biology.
2014 journal article
Systems Biology of Lignin Biosynthesis in Populus trichocarpa: Heteromeric 4-Coumaric Acid:Coenzyme A Ligase Protein Complex Formation, Regulation, and Numerical Modeling
The Plant Cell, 26(3), 876–893.
Contributors: H. Chen n, J. Song n, J. Wang n , Y. Lin n, J. Ducoste n , C. Shuford n, J. Liu n, Q. Li n
2013 article
A spruce sequence
Sederoff, R. (2013, May 1). Nature.
2013 article
High-level gene expression in differentiating xylem of tobacco driven by a 2.0^|^#8201;kb Poplar COMT2 promoter and a 4^|^times;35S enhancer
Liu, E., Peng, S., Li, Q., Sun, Y.-H., Chiang, V. L., & Sederoff, R. R. (2013, January 1). Plant Biotechnology.
2013 article
Monolignol Pathway 4-Coumaric Acid:Coenzyme A Ligases in Populus. trichocarpa: Novel Specificity, Metabolic Regulation, and Simulation of Coenzyme A Ligation Fluxes
Chen, H.-C., Song, J., Williams, C. M., Shuford, C. M., Liu, J., Wang, J. P., … Chiang, V. L. (2013, January 23). PLANT PHYSIOLOGY, Vol. 161, pp. 1501–1516.
Contributors: H. Chen n, J. Song n, C. Williams n , C. Shuford n, J. Liu n, J. Wang n , Q. Li n, R. Shi n
2013 journal article
Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
Proceedings of the National Academy of Sciences, 110(26), 10848–10853.
2013 article
Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa
Shi, R., Shuford, C. M., Wang, J. P., Sun, Y.-H., Yang, Z., Chen, H.-C., … Chiang, V. L. (2013, June 13). Planta, Vol. 238, pp. 487–497.
Contributors: R. Shi n, C. Shuford n, J. Wang n , Y. Sun n, Z. Yang n, H. Chen n, S. Tunlaya-Anukit n, Q. Li n
2013 article
SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
Lin, Y.-C., Li, W., Sun, Y.-H., Kumari, S., Wei, H., Li, Q., … Chiang, V. L. (2013, November 1). The Plant Cell.
2013 journal article
The Amborella Genome and the Evolution of Flowering Plants
Science, 342(6165), 1456–1457.
Contributors: C. DePamphilis *, J. Palmer, S. Rounsley*, D. Sankoff, S. Schuster *, J. Ammiraju*, W. Barbazuk *, S. Chamala
2013 article
Understanding the Role of Proteolytic Digestion on Discovery and Targeted Proteomic Measurements Using Liquid Chromatography Tandem Mass Spectrometry and Design of Experiments
Loziuk, P. L., Wang, J., Li, Q., Sederoff, R. R., Chiang, V. L., & Muddiman, D. C. (2013, October 22). Journal of Proteome Research, Vol. 12, pp. 5820–5829.
Contributors: P. Loziuk n, J. Wang n , Q. Li n, n, V. Chiang n & D. Muddiman n
2012 article
A standard reaction condition and a single HPLC separation system are sufficient for estimation of monolignol biosynthetic pathway enzyme activities
Liu, J., Shi, R., Li, Q., Sederoff, R. R., & Chiang, V. L. (2012, June 23). Planta.
2012 journal article
A transcriptome-based genetic map of Chinese chestnut (Castanea mollissima) and identification of regions of segmental homology with peach (Prunus persica)
Tree Genetics & Genomes, 9(2), 557–571.
2012 journal article
Comprehensive Quantification of Monolignol-Pathway Enzymes in Populus trichocarpa by Protein Cleavage Isotope Dilution Mass Spectrometry
Journal of Proteome Research, 11(6), 3390–3404.
Contributors: C. Shuford n, Q. Li n, Y. Sun n, H. Chen n, J. Wang n , R. Shi n, n, V. Chiang n, D. Muddiman n
2012 article
Functional redundancy of the two 5-hydroxylases in monolignol biosynthesis of Populus trichocarpa: LC–MS/MS based protein quantification and metabolic flux analysis
Wang, J. P., Shuford, C. M., Li, Q., Song, J., Lin, Y.-C., Sun, Y.-H., … Chiang, V. L. (2012, May 24). Planta, Vol. 236, p. 795â808.
Contributors: J. Wang n , C. Shuford n, Q. Li n, J. Song n, Y. Lin n, Y. Sun n, H. Chen n, C. Williams n
2012 article
Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa
Li, Q., Lin, Y.-C., Sun, Y.-H., Song, J., Chen, H., Zhang, X.-H., … Chiang, V. L. (2012, August 22). Proceedings of the National Academy of Sciences.
2011 article
Membrane protein complexes catalyze both 4- and 3-hydroxylation of cinnamic acid derivatives in monolignol biosynthesis
Chen, H.-C., Li, Q., Shuford, C. M., Liu, J., Muddiman, D. C., Sederoff, R. R., & Chiang, V. L. (2011, December 12). Proceedings of the National Academy of Sciences, Vol. 108, pp. 21253–21258.
2011 article
MicroRNAs in trees
Sun, Y.-H., Shi, R., Zhang, X.-H., Chiang, V. L., & Sederoff, R. R. (2011, December 7). Plant Molecular Biology.
2010 article
Arabidopsis thaliana as a model for gelatinous fiber formation
Wyatt, S. E., Sederoff, R., Flaishman, M. A., & Lev-Yadun, S. (2010, May 1). Russian Journal of Plant Physiology.
2010 article
Genomics of forest and ecosystem health in the Fagaceae: meeting report
Kremer, A., Sederoff, R., & Wheeler, N. (2010, February 24). Tree Genetics & Genomes.
2010 article
Lignin and Biomass: A Negative Correlation for Wood Formation and Lignin Content in Trees
Novaes, E., Kirst, M., Chiang, V., Winter-Sederoff, H., & Sederoff, R. (2010, October 1). PLANT PHYSIOLOGY, Vol. 154, pp. 555–561.
Contributors: E. Novaes n, M. Kirst n, V. Chiang n, H. Winter-Sederoff n & n
2010 article
Specific down-regulation of PAL genes by artificial microRNAs in Populus trichocarpa
Shi, R., Yang, C., Lu, S., Sederoff, R., & Chiang, V. L. (2010, August 19). Planta.
2009 article
Comparison of the transcriptomes of American chestnut (Castanea dentata) and Chinese chestnut (Castanea mollissima) in response to the chestnut blight infection
Barakat, A., DiLoreto, D. S., Zhang, Y., Smith, C., Baier, K., Powell, W. A., … Carlson, J. E. (2009, January 1). BMC Plant Biology.
2009 article
Genomics of growth traits in forest trees
Grattapaglia, D., Plomion, C., Kirst, M., & Sederoff, R. R. (2009, January 30). Current Opinion in Plant Biology.
2009 article
Towards a Systems Approach for Lignin Biosynthesis in Populus trichocarpa: Transcript Abundance and Specificity of the Monolignol Biosynthetic Genes
Shi, R., Sun, Y.-H., Li, Q., Heber, S., Sederoff, R., & Chiang, V. L. (2009, December 8). Plant and Cell Physiology, Vol. 51, pp. 144–163.
2008 article
Comparative analysis of transcript abundance in Pinus sylvestris after challenge with a saprotrophic, pathogenic or mutualistic fungus
Adomas, A., Heller, G., Olson, Å., Osborne, J., Karlsson, M., Nahalkova, J., … Asiegbu, F. O. (2008, June 1). Tree Physiology.
2008 article
High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
Novaes, E., Drost, D. R., Farmerie, W. G., Pappas, G. J., Grattapaglia, D., Sederoff, R. R., & Kirst, M. (2008, June 30). BMC Genomics.
2008 article
Role of genomics in the potential restoration of the American chestnut
Wheeler, N., & Sederoff, R. (2008, October 28). Tree Genetics & Genomes.
2008 journal article
Transcriptional analysis of Pinus sylvestris roots challenged with the ectomycorrhizal fungus Laccaria bicolor
BMC Plant Biology, 8.
2007 article
Regulatory science in forest biotechnology
Sederoff, R. (2007, January 9). Tree Genetics & Genomes.
2007 article
Synthesis of Hydroxyphenylpropanoid β‐D‐glucosides
Mazur, M., Hope‐Ross, K., Kadla, J. F., Sederoff, R., & Chang, H. (2007, April 1). Journal of Wood Chemistry and Technology.
2007 article
Transcript profiling of a conifer pathosystem: response of Pinus sylvestris root tissues to pathogen (Heterobasidion annosum) invasion
Adomas, A., Heller, G., Li, G., Olson, Å., Chu, T.-M., Osborne, J., … Asiegbu, F. O. (2007, October 1). Tree Physiology, Vol. 27, pp. 1441–1458.
2005 journal article
Comparison of standard exponential and linear techniques to amplify small cDNA samples for microarrays
BMC Genomics, 6(61).
2005 article
Genetic Architecture of Transcript-Level Variation in Differentiating Xylem of a Eucalyptus Hybrid
Kirst, M., Basten, C. J., Myburg, A. A., Zeng, Z.-B., & Sederoff, R. R. (2005, February 1). Genetics.
2005 conference paper
Variation of a-cellulose content and related metabolites during wood formation in loblolly pine
13th ISWFPC Proceedings, 13.
2005 article
Verification of QTL linked markers for propagation traits in Eucalyptus
Marques, C. M., Carocha, V. J., Sá, A. R. P., Oliveira, M. R., Pires, A. M., Sederoff, R., & Borralho, N. M. G. (2005, September 27). Tree Genetics & Genomes.
2004 journal article
An auxin-inducible gene from loblolly pine ( Pinus taeda L.) is differentially expressed in mature and juvenile-phase shoots and encodes a putative transmembrane protein
Planta, 218(6), 916–927.
2004 article
Coordinated Genetic Regulation of Growth and Lignin Revealed by Quantitative Trait Locus Analysis of cDNA Microarray Data in an Interspecific Backcross of Eucalyptus
Kirst, M., Myburg, A. A., León José P.G. De, Kirst, M. E., Scott, J., & Sederoff, R. (2004, August 1). PLANT PHYSIOLOGY.
2004 journal article
Gene Expression during Formation of Earlywood and Latewood in Loblolly Pine: Expression Profiles of 350 Genes
Plant Biology, 6(6), 654–663.
2004 journal article
Genetics of Postzygotic Isolation in Eucalyptus: Whole-Genome Analysis of Barriers to Introgression in a Wide Interspecific Cross of Eucalyptus grandis and E. globulus
Genetics, 166(3), 1405–1418.
2004 article
Metabolic Profiling: A New Tool in the Study of Wood Formation
Morris, C. R., Scott, J. T., Chang, H.-min, Sederoff, R. R., O'Malley, D., & Kadla, J. F. (2004, February 21). Journal of Agricultural and Food Chemistry.
2004 article
Microarray Analyses of Gene Expression during Adventitious Root Development in Pinus contorta
Brinker, M., Zyl, L., Liu, W., Craig, D., Sederoff, R. R., Clapham, D. H., & Arnold, S. (2004, July 1). PLANT PHYSIOLOGY.
2004 article
The effect of reduced glutathione on morphology and gene expression of white spruce (Picea glauca) somatic embryos
Stasolla, C. (2004, January 30). Journal of Experimental Botany.
2004 article
Variation in transcript abundance during somatic embryogenesis in gymnosperms
Stasolla, C., Bozhkov, P. V., Chu, T.-M., Zyl, L., Egertsdotter, U., Suarez, M. F., … Sederoff, R. R. (2004, October 1). Tree Physiology.
2003 journal article
An arabinogalactan protein associated with secondary cell wall formation in differentiating xylem of loblolly pine
Plant Molecular Biology, 52(1), 91–102.
2003 article
Analysis of lignin produced by cinnamyl alcohol dehydrogenase-deficient Pinus taeda cultured cells
Stasolla, C., Scott, J., Egertsdotter, U., Kadla, J., Malley, D. O., Sederoff, R., & Zyl, L. (2003, May 1). Plant Physiology and Biochemistry.
2003 journal article
Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana
Proceedings of the National Academy of Sciences, 100(12), 7383–7388.
2003 journal article
Characterisation of PtMYB1, an R2R3-MYB from pine xylem
Plant Molecular Biology, 53(4), 597–608.
2003 journal article
Characterisation of a pine MYB that regulates lignification
The Plant Journal, 36(6), 743–754.
2003 journal article
Comparative genetic linkage maps of Eucalyptus grandis, Eucalyptus globulus and their F1 hybrid based on a double pseudo-backcross mapping approach
Theoretical and Applied Genetics, 107(6), 1028–1042.
2003 article
Genome studies and molecular genetics
Sasaki, T., & Sederoff, R. R. (2003, April 1). Current Opinion in Plant Biology.
2003 article
Photosynthetic acclimation is reflected in specific patterns of gene expression in drought-stressed loblolly pine
2003 article
The Effects of Polyethylene Glycol on Gene Expression of Developing White Spruce Somatic Embryos
Stasolla, C., Zyl, L., Egertsdotter, U., Craig, D., Liu, W., & Sederoff, R. R. (2003, January 1). PLANT PHYSIOLOGY.
2003 article
Transcript profiles of stress-related genes in developing white spruce (Picea glauca) somatic embryos cultured with polyethylene glycol
Stasolla, C., Zyl, L., Egertsdotter, U., Craig, D., Liu, W., & Sederoff, R. R. (2003, June 30). Plant Science.
2003 article
Up, down and up again is a signature global gene expression pattern at the beginning of gymnosperm embryogenesis
Zyl, L., Bozhkov, P. V., Clapham, D. H., Sederoff, R. R., & Arnold, S. (2003, March 1). Gene Expression Patterns.
2002 article
Conservation and synteny of SSR loci and QTLs for vegetative propagation in four Eucalyptus species
Marques, C., Brondani, R., Grattapaglia, D., & Sederoff, R. (2002, August 1). Theoretical and Applied Genetics.
2002 article
Heterologous array analysis in Pinaceae: hybridization of Pinus taeda cDNA arrays with cDNA from needles and embryogenic cultures of P. taeda, P. sylvestris or Picea abies
Zyl, L., Arnold, S., Bozhkov, P., Chen, Y., Egertsdotter, U., MacKay, J., … Clapham, D. H. (2002, August 1). Comparative and Functional Genomics.
2002 article
NMR analysis of lignins in CAD-deficient plants. Part 1. Incorporation of hydroxycinnamaldehydes and hydroxybenzaldehydes into lignins
Kim, H., Ralph, J., Lu, F., Ralph, S. A., Boudet, A.-M., MacKay, J. J., … Higuchi, T. (2002, December 11). Organic & Biomolecular Chemistry.
2002 article
Studying the functional genomics of stress responses in loblolly pine with the Expresso microarray experiment management system
Heath, L. S., Ramakrishnan, N., Sederoff, R. R., Whetten, R. W., Chevone, B. I., Struble, C. A., … al. (2002, April 30). Comparative and Functional Genomics, Vol. 3, pp. 226–243.
2001 article
Elucidation of new structures in lignins of CAD- and COMT-deficient plants by NMR
Ralph, J., Lapierre, C., Marita, J. M., Kim, H., Lu, F., Hatfield, R. D., … Boerjan, W. (2001, July 1). Phytochemistry.
2001 journal article
Functional genomics and cell wall biosynthesis in loblolly pine
Plant Molecular Biology, 47(1/2), 275–291.
2001 journal article
Genotypic control of high-frequency adventitious shoot regeneration via somatic organogenesis in loblolly pine
Plant Science, 161(2), 267–272.
2001 article
Grafting for transgene containment
Lev-Yadun, S., & Sederoff, R. (2001, December 1). Nature Biotechnology.
2001 article
High-Throughput AFLP Analysis Using Infrared Dye-Labeled Primers and an Automated DNA Sequencer
Myburg, A. A., Remington, D. L., O’Malley, D. M., Sederoff, R. R., & Whetten, R. W. (2001, February 1). BioTechniques, Vol. 30, p. 348.
2001 journal article
Molecular Cloning and Expression of Eight Laccase cDNAs in Loblolly Pine (Pinus taeda)*
Journal of Plant Research, 114(2), 147–155.
2001 article
Moribund Funding in Agricultural Research
Robertson, G. P., Barry, P. J., Busta, F. F., Collier, R. J., Keen, N. T., Sederoff, R. R., … Urban, T. N. (2001, March 16). Science.
2001 article
PULPING AND BLEACHING OF CAD-DEFICIENT WOOD
Dimmel, D. R., MacKay, J. J., Althen, E. M., Parks, C., & Sederoff, R. R. (2001, February 28). Journal of Wood Chemistry and Technology.
2001 article
Regeneration of transgenic loblolly pine (Pinus taeda L.) from zygotic embryos transformed with Agrobacterium tumefaciens
Tang, W., Sederoff, R., & Whetten, R. (2001, October 1). Planta, Vol. 213, pp. 981–989.
2000 journal article
Differential expression of genes encoding cell wall proteins in vascular tissues from vertical and bent loblolly pine trees
Tree Physiology, 20(7), 457–466.
2000 article
Lignin Structure in a Mutant Pine Deficient in Cinnamyl Alcohol Dehydrogenase
Lapierre, C., Pollet, B., MacKay, J. J., & Sederoff, R. R. (2000, May 20). Journal of Agricultural and Food Chemistry.
2000 patent
Methods for within family selection in woody perennials using genetic markers
Washington, DC: U.S. Patent and Trademark Office.
2000 article
Pines as Model Gymnosperms To Study Evolution, Wood Formation, and Perennial Growth
Lev-Yadun, S., & Sederoff, R. (2000, September 1). Journal of Plant Growth Regulation.
2000 article
Tree genomes: what will we understand about them by the year 2020 and how might we use that knowledge?
Sederoff, R. R. (2000, January 1). Forestry Sciences.
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1999 article
Building better trees with antisense
Sederoff, R. (1999, August 1). Nature Biotechnology.
1999 article
Genetic dissection of vegetative propagation traits in Eucalyptus tereticornis and E. globulus
Marques, C. M., Vasquez-Kool, J., Carocha, V. J., Ferreira, J. G., O’Malley, D. M., Liu, B.-H., & Sederoff, R. (1999, October 1). Theoretical and Applied Genetics.
1999 article
High-efficiency Agrobacterium-mediated transformation of Norway spruce (Picea abies) and loblolly pine (Pinus taeda)
Wenck, A. R., Quinn, M., Whetten, R. W., Pullman, G., & Sederoff, R. (1999, February 1). Plant Molecular Biology, Vol. 39, pp. 407–416.
1999 patent
Methods for within family selection of disease resistance in woody perennials using genetic markers
Washington, DC: U.S. Patent and Trademark Office.
1999 article
Modified Lignin and Delignification with a CAD-Deficient Loblolly Pine
MacKay, J., Presnell, T., Jameel, H., Taneda, H., O'Malley, D., & Sederoff, R. (1999, July 1). Holzforschung.
1999 journal article
Surfing on AG Biotech into genomics
Molecular Breeding, 5(1999), 485–491.
1999 article
Unexpected variation in lignin
Sederoff, R. R., MacKay, J. J., Ralph, J., & Hatfield, R. D. (1999, April 1). Current Opinion in Plant Biology.
1998 article
AFLP genetic maps of Eucalyptus globulus and E. tereticornis
Marques, C. M., Araújo, J. A., Ferreira, J. G., Whetten, R., O’Malley, D. M., Liu, B.-H., & Sederoff, R. (1998, May 1). Theoretical and Applied Genetics, Vol. 96, pp. 727–737.
1998 article
Analysis of xylem formation in pine by cDNA sequencing
Allona, I., Quinn, M., Shoop, E., Swope, K., Cyr, S. S., Carlis, J., … Whetten, R. W. (1998, August 4). Proceedings of the National Academy of Sciences, Vol. 95, pp. 9693–9698.
1998 patent
Method of altering lignin in trees
Washington, DC: U.S. Patent and Trademark Office.
1998 journal article
NMR applications in cell wall research
1998 article
RECENT ADVANCES IN UNDERSTANDING LIGNIN BIOSYNTHESIS
Whetten, R. W., MacKay, J. J., & Sederoff, R. R. (1998, June 1). Annual Review of Plant Physiology and Plant Molecular Biology, Vol. 49, pp. 585–609.
1998 journal article
The promise of forest biotechnology
Paper Age, (1998 Aug.), 13–18.
1997 article
Abnormal Lignin in a Loblolly Pine Mutant
Ralph, J., MacKay, J. J., Hatfield, R. D., O'Malley, D. M., Whetten, R. W., & Sederoff, R. R. (1997, July 11). Science, Vol. 277, pp. 235–239.
1997 article
Inheritance, gene expression, and lignin characterization in a mutant pine deficient in cinnamyl alcohol dehydrogenase
MacKay, J. J., O’Malley, D. M., Presnell, T., Booker, F. L., Campbell, M. M., Whetten, R. W., & Sederoff, R. R. (1997, July 22). Proceedings of the National Academy of Sciences, Vol. 94, pp. 8255–8260.
1996 article
Molecular Markers, Forest Genetics, and Tree Breeding
O’Malley, D. M., Grattapaglia, D., Chaparro, J. X., Wilcox, P. L., Amerson, H. V., Liu, B.-H., … Sederoff, R. (1996, January 1). Stadler Genetics Symposia Series, pp. 87–102.
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1995 article
Lignin Biosynthesis
Whetten, R., & Sederoff, R. (1995, July 1). The Plant Cell, Vol. 7, pp. 1001–1013.
1994 article
Genetic Regulation of Lignin Biosynthesis and the Potential Modification of Wood by Genetic Engineering in Loblolly Pine
Sederoff, R., Campbell, M., David, O. M., & Whetten, R. (1994, January 1).
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1994 journal article
Genetic-linkage maps of eucalyptus-grandis and eucalyptus-urophylla using a pseudo-testcross - mapping strategy and rapd markers
Genetics, 137(4), 1121–1137.
1993 conference paper
Application of genetic markers to tree breeding
Proceedings of the 22nd Southern Forest Tree Improvement Conference, 452–463.
1992 patent
Ballistic transformation of conifers
Washington, DC: U.S. Patent and Trademark Office.
1992 conference paper
Mapping in woody plants with RAPD markers: application to breeding in forestry and horticulture
Proceedings of the Symposium on the Applications of RAPD Technology to Plant Breeding, 37–40. Joint Plant Breeding Symposium Series, Crop Science Society of America, American Society for Horticultural Science, and American Genetics Association.
1989 patent
Method for transforming pine
Washington, DC: U.S. Patent and Trademark Office.
1981 article
Improved estimation of DNA fragment lengths from agarose gels
Schaffer, H. E., & Sederoff, R. R. (1981, July 1). Analytical Biochemistry.