William L. Franck

Works (9)

Updated: July 5th, 2023 15:48
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2018 article

Sequential Phosphopeptide Enrichment for Phosphoproteome Analysis of Filamentous Fungi: A Test Case Using Magnaporthe oryzae

PLANT PATHOGENIC FUNGI AND OOMYCETES: METHODS AND PROTOCOLS, Vol. 1848, pp. 81–91.

By: Y. Oh n, W. Franck n & R. Dean n 

author keywords: Mass spectrometry; Phosphopeptide enrichment; Magnaporthe oryzae; Iron-IMAC; TiO2; Fungus
MeSH headings : Chromatography, Affinity; Chromatography, Liquid; Computational Biology / methods; Data Analysis; Fungal Proteins; Humans; Magnaporthe / metabolism; Phosphopeptides / chemistry; Phosphopeptides / isolation & purification; Phosphopeptides / metabolism; Phosphoproteins / chemistry; Phosphoproteins / isolation & purification; Phosphoproteins / metabolism; Proteome; Proteomics / methods; Tandem Mass Spectrometry; Titanium / chemistry
Sources: Web Of Science, ORCID
Added: May 13, 2019

2017 journal article

Identification and characterization of suppressors of plant cell death (SPD) effectors from Magnaporthe oryzae

MOLECULAR PLANT PATHOLOGY, 18(6), 850–863.

By: W. Sharpee n, Y. Oh n, M. Yi*, W. Franck n, A. Eyre n, L. Okagaki n, B. Valent *, R. Dean n 

author keywords: effector; rice blast; suppressor
MeSH headings : Fungal Proteins / genetics; Fungal Proteins / metabolism; Host-Pathogen Interactions; Magnaporthe / metabolism; Magnaporthe / pathogenicity; Plant Diseases / genetics; Plant Diseases / microbiology; Plant Leaves / metabolism; Plant Leaves / microbiology; Tobacco / metabolism; Tobacco / microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Comparative transcriptomic analysis of symbiotic Bradyrhizobium japonicum

Symbiosis, 63(3), 123–135.

By: S. Franck, W. Franck, S. Birke, W. Chang, D. Sangurdekar, E. Cytryn, T. Joshi, M. Sadowsky ...

Source: NC State University Libraries
Added: August 6, 2018

2014 journal article

Soybean ureases, but not that of Bradyrhizobium japonicum, are involved in the process of soybean root nodulation

Journal of Agricultural and Food Chemistry, 62(16), 3517–3524.

By: M. Medeiros-Silva, W. Franck, M. Borba, S. Pizzato, K. Strodtman, D. Emerich, G. Stacey, J. Poacco, C. Carlini

Source: NC State University Libraries
Added: August 6, 2018

2013 journal article

Temporal Analysis of theMagnaporthe OryzaeProteome During Conidial Germination and Cyclic AMP (cAMP)-mediated Appressorium Formation

Molecular & Cellular Proteomics, 12(8), 2249–2265.

By: W. Franck n, E. Gokce n, Y. Oh n, D. Muddiman n  & R. Dean n 

MeSH headings : Cyclic AMP / metabolism; Fungal Proteins / metabolism; Magnaporthe / growth & development; Magnaporthe / metabolism; Mitochondrial Proteins / metabolism; Peptide Hydrolases / metabolism; Proteome; Spores, Fungal / growth & development; Spores, Fungal / metabolism
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2012 journal article

In-Depth Analysis of the Magnaporthe oryzae Conidial Proteome

JOURNAL OF PROTEOME RESEARCH, 11(12), 5827–5835.

By: E. Gokce n, W. Franck n, Y. Oh n, R. Dean n  & D. Muddiman n 

author keywords: proteomics; mass spectrometry; Magnaporthe oryzae; FASP; statistical tests; differential protein expression
MeSH headings : Cell Nucleus / chemistry; Chemical Fractionation / methods; Chromatography, Liquid / methods; Cytoplasm / chemistry; Fungal Proteins / analysis; Fungal Proteins / chemistry; Magnaporthe / chemistry; Mass Spectrometry / methods; Nanotechnology; Nuclear Proteins / analysis; Nuclear Proteins / chemistry; Peptides / analysis; Peptides / chemistry; Proteome / analysis; Proteome / chemistry; Reproducibility of Results; Sensitivity and Specificity; Spores, Fungal / chemistry; Time Factors
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

Polyubiquitin Is Required for Growth, Development and Pathogenicity in the Rice Blast Fungus Magnaporthe oryzae

PLoS ONE, 7(8), e42868.

By: Y. Oh n, W. Franck n, S. Han*, A. Shows n, E. Gokce n, D. Muddiman n , R. Dean n 

Ed(s): K. Nielsen

MeSH headings : Boronic Acids / pharmacology; Bortezomib; Cluster Analysis; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Profiling; Gene Expression Regulation, Fungal; Germination / genetics; Magnaporthe / genetics; Magnaporthe / growth & development; Magnaporthe / pathogenicity; Mutation; Nitrogen / metabolism; Oryza / microbiology; Plant Diseases / microbiology; Polyubiquitin / genetics; Polyubiquitin / metabolism; Proteasome Inhibitors / pharmacology; Proteolysis / drug effects; Proteomics; Pyrazines / pharmacology; Ubiquitination
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2011 journal article

Evaluation of Normalization Methods on GeLC-MS/MS Label-Free Spectral Counting Data to Correct for Variation during Proteomic Workflows

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 22(12), 2199–2208.

By: E. Gokce n, C. Shuford n, W. Franck n, R. Dean n  & D. Muddiman n 

author keywords: Label-free; Proteomics; Mass spectrometry; Total spectral count normalization; Normalized spectral abundance factor; Quantification; Spectral counting; Significance test; Fold-change; GeLC-MS/MS; nanoLC-MS; Orbitrap XL
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 journal article

Direct Comparison of Stable Isotope Labeling by Amino Acids in Cell Culture and Spectral Counting for Quantitative Proteomics

ANALYTICAL CHEMISTRY, 82(20), 8696–8702.

By: T. Collier n, P. Sarkar  n, W. Franck n, B. Rao n, R. Dean n  & D. Muddiman n 

MeSH headings : Amino Acids / analysis; Animals; Cell Line; Humans; Isotope Labeling / methods; Mice; Proteomics / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018