Zhe Lyu

Editorial: The methane moment - Cross-boundary significance of methanogens: Preface

Frontiers in Microbiology, 13.

Back to the Source: Molecular Identification of Methanogenic Archaea as Markers of Colonic Methane Production

Digestive Diseases and Sciences, 66(11), 3661–3664.

Tuning Gene Expression by Phosphate in the Methanogenic Archaeon Methanococcus maripaludis

ACS Synthetic Biology, 10(11), 3028–3039.

Data-Driven Models Reveal Mutant Cell Behaviors Important for Myxobacterial Aggregation

MSystems, 5(4).

Data-driven models reveal mutant cell behaviors important for myxobacterial aggregation

Zhang, Z., Cotter, C. R., Lyu, Z., Shimkets, L. J., & Igoshin, O. A. (2020, February 10). [], Vol. 2.

Posttranslational Methylation of Arginine in Methyl Coenzyme M Reductase Has a Profound Impact on both Methanogenesis and Growth of Methanococcus maripaludis

Journal of Bacteriology, 202(3).

Diversity and Taxonomy of Methanogens

Lyu, Z., & Liu, Y. (2019, July). Biogenesis of Hydrocarbons, pp. 19–77.

The Nbp35/ApbC homolog acts as a nonessential [4Fe‐4S] transfer protein in methanogenic archaea

FEBS Letters, 594(5), 924–932.

Transplanting the pathway engineering toolbox to methanogens

Current Opinion in Biotechnology, 59, 46–54.

Assembly of Methyl Coenzyme M Reductase in the Methanogenic Archaeon Methanococcus maripaludis

Journal of Bacteriology, 200(7).

Diversity and Taxonomy of Methanogens

Biogenesis of Hydrocarbons, pp. 1–59.

Metabolic shift at the class level sheds light on adaptation of methanogens to oxidative environments

The ISME Journal.

Methanogenesis

Current Biology, 28(13), R727–R732.

An Important Role for Purifying Selection in Archaeal Genome Evolution

MSystems, 2(5), e00112–17.

Mmp10 is required for post-translational methylation of arginine at the active site of methyl-coenzyme M reductase

Lyu, Z., Chou, C.-wen, Shi, H., Patel, R., Duin, E. C., & Whitman, W. B. (2017, October 30). (Vol. 10). Vol. 10.

Sanguibacter gelidistatuariae sp. nov., a novel psychrotolerant anaerobe from an ice sculpture in Antarctica, and emendation of descriptions for the family Sanguibacteraceae, the genus Sanguibacter and species S. antarcticus, S. inulinus, S. kedieii, S. marinus, S.soli and S. suarezii.

International Journal of Systematic and Evolutionary Microbiology.

Williamwhitmania taraxaci gen. nov., sp. nov., a proteolytic anaerobe with a novel type of cytology from Lake Untersee in Antarctica, description of Williamwhitmaniaceae fam. nov., and emendation of the order Bacteroidales Krieg 2012.

International Journal of Systematic and Evolutionary Microbiology, 9.

Engineering the Autotroph Methanococcus maripaludis for Geraniol Production.

ACS Synthetic Biology. http://europepmc.org/abstract/med/26886063

Evolution of the archaeal and mammalian information processing systems: towards an archaeal model for human disease.

http://europepmc.org/abstract/med/27261368

Raineyella antarctica gen. nov., sp. nov., a psychrotolerant, d-amino-acid-utilizing anaerobe isolated from two geographic locations of the Southern Hemisphere.

International Journal of Systematic and Evolutionary Microbiology, 66(12), 5529–5536,

Comparative genomics of three Methanocellales strains reveal novel taxonomic and metabolic features

Environmental Microbiology Reports, 2(3), n/a-n/a.

Microbiological investigation of two chondrite meteorites: Murchison and Polonnaruwa

In R. B. Hoover, G. V. Levin, A. Y. Rozanov, & N. C. Wickramasinghe (Eds.), Instruments, Methods, and Missions for Astrobiology XVII.

Molecular studies of anaerobic strains from Antarctica and their taxonomic identifications

In R. B. Hoover, G. V. Levin, A. Y. Rozanov, & N. C. Wickramasinghe (Eds.), Instruments, Methods, and Missions for Astrobiology XVII.

Response of a paddy soil methanogen to syntrophic growth as revealed by transcriptional analyses

Applied and Environmental Microbiology, 5.

Complete Genome Sequence of a Thermophilic Methanogen, Methanocella conradii HZ254, Isolated from Chinese Rice Field Soil

Journal of Bacteriology, 194(9), 2398–2399.

Methanocella conradii sp. nov., a Thermophilic, Obligate Hydrogenotrophic Methanogen, Isolated from Chinese Rice Field Soil

Dynamics of the Methanogenic Archaeal Community during Plant Residue Decomposition in an Anoxic Rice Field Soil

Applied and Environmental Microbiology, 74(9), 2894–2901.