Recent Works

search all works

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2025 journal article

Reconsidering space-for-time substitution in climate change ecology

Nature Climate Change.

By: M. Evans, P. Adler, A. Angert, S. Dey, M. Girardin, K. Heilman, S. Klesse, D. Perret ...

topics (OpenAlex): Species Distribution and Climate Change; Climate variability and models
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Source: ORCID
Added: August 1, 2025

2025 chapter

Regenerative agriculture's effects on soils and greenhouse gas emissions

In Reference Module in Food Science.

By: D. Sihi*, S. Voruganti, P. Ghosh & B. Dari

topics (OpenAlex): Photovoltaic Systems and Sustainability
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: ORCID
Added: August 1, 2025

2025 article

Two decades of resurrection studies: What have we learned about contemporary evolution of plant species?

Pennington, L., Sheth, S. N., Franks, S. J., Anderson, J. T., & Hamann, E. (2025, July 31).

By: L. Pennington, S. Sheth*, S. Franks, J. Anderson & E. Hamann

topics (OpenAlex): Plant Taxonomy and Phylogenetics; Ecology and Vegetation Dynamics Studies; Botany and Plant Ecology Studies
Source: ORCID
Added: August 1, 2025

2025 article

John Matthew McDowell: A Visionary Leader in Molecular Oomycete-Plant Interactions and a Wonderful Mentor and Friend to Many

Anderson, R. G., Chang, J. H., Dangl, J. L., Dinkeloo, K., Donofrio, N., Eulgem, T., … Vinatzer, B. A. (2025, July 15). MOLECULAR PLANT-MICROBE INTERACTIONS.

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧
topics (OpenAlex): Plant-Microbe Interactions and Immunity; Plant Pathogens and Fungal Diseases; Plant Pathogens and Resistance
Sources: Web Of Science, NC State University Libraries
Added: July 28, 2025

2025 journal article

Seed inhabiting bacterial endophyte <i>Bacillus amyloliquefaciens</i> (SS7) defends sorghum Sudan grass seedlings from a phytopathogen <i>Rhizoctonia solani</i>

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 41(7).

By: K. Kumar*, D. Kumar*, G. Pal n & S. Verma*

co-author countries: India 🇮🇳
author keywords: Seed endophytic bacteria; <italic>Bacillus amyloliquefaciens</italic>; Seedling protection; <italic>Rhizoctonia Solani</italic>; Biocontrol; Microscopy
MeSH headings : Rhizoctonia / pathogenicity; Rhizoctonia / drug effects; Rhizoctonia / physiology; Endophytes / isolation & purification; Endophytes / genetics; Endophytes / physiology; Endophytes / classification; Seedlings / microbiology; Seedlings / growth & development; Bacillus amyloliquefaciens / isolation & purification; Bacillus amyloliquefaciens / genetics; Bacillus amyloliquefaciens / physiology; Bacillus amyloliquefaciens / classification; Seeds / microbiology; Plant Diseases / microbiology; Plant Diseases / prevention & control; Sorghum / microbiology; Sorghum / growth & development; RNA, Ribosomal, 16S / genetics; Antifungal Agents / pharmacology; Antifungal Agents / metabolism; Lipopeptides / pharmacology; Lipopeptides / genetics; Antibiosis; Phylogeny; Siderophores / metabolism
topics (OpenAlex): Plant-Microbe Interactions and Immunity; Plant Disease Resistance and Genetics; Legume Nitrogen Fixing Symbiosis
Source: Web Of Science
Added: July 17, 2025

2025 journal article

Structural variation detection and association analysis of whole-genome-sequence data from 16,543 Alzheimer's disease sequencing project subjects

ALZHEIMERS & DEMENTIA, 21(6).

By: H. Wang*, B. Dombroski*, P. Cheng*, A. Tucci n, Y. Si n, J. Farrell*, J. Tzeng n, Y. Leung* ...

author keywords: Alzheimer's disease; copy number variation; NCK2; RNA5SP293; structural variation
MeSH headings : Humans; Alzheimer Disease / genetics; Whole Genome Sequencing; Genetic Predisposition to Disease / genetics; LDL-Receptor Related Proteins / genetics; ATP-Binding Cassette Transporters / genetics; Membrane Transport Proteins / genetics; Male; Polymorphism, Single Nucleotide; Female; Linkage Disequilibrium; Amyloid beta-Protein Precursor / genetics; Genome-Wide Association Study
topics (OpenAlex): Genomics and Rare Diseases; RNA Research and Splicing; Genetic Associations and Epidemiology
Sources: Web Of Science, NC State University Libraries
Added: July 17, 2025

2025 article

A Minimal Medium for Culturing Maize Root-Associated Microbes Based on a Plant Growth Medium

Garrell, A.-K., Vintila, S., Phillip, H., Beck, A. E., & Kleiner, M. (2025, July 7).

By: A. Garrell, S. Vintila, H. Phillip, A. Beck & M. Kleiner*

topics (OpenAlex): Biofuel production and bioconversion
Source: ORCID
Added: July 15, 2025

2025 journal article

Metaproteomics-based stable isotope fingerprinting links intestinal bacteria to their carbon source and captures diet-induced substrate switching

Kleiner, M., Mordant, A., & Blakeley-Ruiz, J. A. (2025, June 23).

topics (OpenAlex): Microbial Community Ecology and Physiology; Gut microbiota and health; Amino Acid Enzymes and Metabolism
Source: ORCID
Added: July 1, 2025

2025 journal article

<i>In vitro</i> demonstration and <i>in planta</i> characterization of a condensed, reverse TCA (crTCA) cycle

FRONTIERS IN PLANT SCIENCE, 16.

By: N. Wilson n, C. Smith-Moore, Y. Xu*, B. Edwards n, C. La Hovary n, K. Li n, D. Aslett n, M. Ji n ...

author keywords: photosynthesis; CO2 fixation; synthetic biology; Camelina sativa; reverse TCA cycle; carbon capture
topics (OpenAlex): Plant tissue culture and regeneration; Plant Virus Research Studies; Plant Pathogens and Resistance
Sources: Web Of Science, NC State University Libraries
Added: June 30, 2025

2025 journal article

Deep learning-driven imaging of cell division and cell growth across an entire eukaryotic life cycle

MOLECULAR BIOLOGY OF THE CELL, 36(6).

By: T. Kennedy n, B. Yalcinkaya n, S. Ramakanth n, S. Neupane n, N. Tadic n, N. Buchler n, O. Arguello-Miranda n

MeSH headings : Deep Learning; Saccharomyces cerevisiae / growth & development; Saccharomyces cerevisiae / cytology; Saccharomyces cerevisiae / metabolism; Cell Division / physiology; Meiosis / physiology; Saccharomyces cerevisiae Proteins / metabolism; Life Cycle Stages / physiology; Cell Cycle / physiology; CDC2 Protein Kinase / metabolism; Algorithms; Cell Proliferation
topics (OpenAlex): Fungal Biology and Applications; Microbial Natural Products and Biosynthesis; Probiotics and Fermented Foods
Sources: Web Of Science, NC State University Libraries
Added: June 16, 2025

2025 journal article

Mixed DAMP/MAMP oligosaccharides promote both growth and defense against fungal pathogens of cucumber

PLANT SCIENCE, 359.

co-author countries: Japan 🇯🇵
author keywords: Anthracnose; Biostimulant; Cucumber; Damage-associated molecular patterns; Elicitors; Microbe-associated molecular patterns; Oligosaccharides; Powdery mildew
topics (OpenAlex): Studies on Chitinases and Chitosanases; Polysaccharides and Plant Cell Walls; Plant-Microbe Interactions and Immunity
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: June 16, 2025

2025 journal article

Limited directional change in mountaintop plant communities over 19 years in western North America

Ecosphere.

By: K. Goff n, M. Oldfather*, J. Nachlinger*, B. Smithers*, M. Koontz*, C. Bishop*, J. Bishop*, M. Burke*, S. Sheth n

topics (OpenAlex): Ecology and Vegetation Dynamics Studies; Rangeland and Wildlife Management; Plant and animal studies
Source: ORCID
Added: May 22, 2025

2025 journal article

Integrative spatial transcriptomic analysis pinpoints the role of the ferroxidase, TaMCO3, in wheat root tip iron mobilization

PLANT JOURNAL, 122(2).

By: R. Joon*, G. Singh*, D. Tyagi*, V. Meena*, V. Shukla*, K. Agrwal*, S. Saini*, H. Mankiran* ...

co-author countries: India 🇮🇳
author keywords: wheat; iron uptake; ferroxidase; transcriptome; molecular functions
MeSH headings : Triticum / genetics; Triticum / metabolism; Triticum / enzymology; Iron / metabolism; Ceruloplasmin / metabolism; Ceruloplasmin / genetics; Plant Roots / metabolism; Plant Roots / genetics; Gene Expression Profiling; Plant Proteins / metabolism; Plant Proteins / genetics; Meristem / metabolism; Meristem / genetics; Gene Expression Regulation, Plant; Transcriptome
topics (OpenAlex): Plant Micronutrient Interactions and Effects; Plant Stress Responses and Tolerance; Plant nutrient uptake and metabolism
Sources: Web Of Science, NC State University Libraries
Added: May 19, 2025

2025 personal communication

Genomic data uncover complex hybridization and evolutionary history of the bunchberry species complex (Cornus L., Cornaceae)

Sun, Y., Zhou, W., & Xiang, Q.-Y. (2025, May).

By: Y. Sun*, W. Zhou n & Q. Xiang n

co-author countries: China 🇨🇳
topics (OpenAlex): Berry genetics and cultivation research; Plant Pathogens and Fungal Diseases; Yeasts and Rust Fungi Studies
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: April 21, 2025

2025 journal article

The case for microbiome stewardship: what it is and how to get there

MSystems.

co-author countries: Australia 🇦🇺 Canada 🇨🇦 United Kingdom of Great Britain and Northern Ireland 🇬🇧

Contributors: L. Proctor

Ed(s): J. Gilbert

topics (OpenAlex): Gut microbiota and health; Ethics in Clinical Research; Pharmaceutical and Antibiotic Environmental Impacts
Source: ORCID
Added: April 16, 2025

2025 article

High-quality draft genome sequences of seven <i>Ralstonia</i> spp. isolated from temperate forest soils

Chan, A. L. H., Choudoir, M. J., Narayanan, A., Rodriguez-Ramos, D., Pold, G., Billings, A. F., & DeAngelis, K. M. (2025, April 14). (S. Roux, Ed.). MICROBIOLOGY RESOURCE ANNOUNCEMENTS, Vol. 4.

By: A. Chan*, M. Choudoir n, A. Narayanan*, D. Rodriguez-Ramos*, G. Pold*, A. Billings*, K. DeAngelis*

co-author countries: Sweden 🇸🇪

Ed(s): S. Roux

author keywords: <italic>Ralstonia</italic>; forest soils
topics (OpenAlex): Genomics and Phylogenetic Studies; Plant Disease Resistance and Genetics; Legume Nitrogen Fixing Symbiosis
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: April 14, 2025

2025 journal article

Transdisciplinary Collaborations for Advancing Sustainable and Resilient Agricultural Systems

GLOBAL CHANGE BIOLOGY, 31(4).

By: V. Bacheva*, I. Madison n, M. Baldwin*, J. Baker n, M. Beilstein*, D. Call n, J. Deaver n, K. Efimenko n ...

co-author countries: Türkiye 🇹🇷
author keywords: agriculture; fertilizer management; food security; stakeholder engagement; transdisciplinary collaborations; water resource management
MeSH headings : Agriculture / methods; Fertilizers; Interdisciplinary Research; Climate Change; Conservation of Natural Resources / methods; Sustainable Development; Interdisciplinary Communication
topics (OpenAlex): Plant nutrient uptake and metabolism; Wastewater Treatment and Nitrogen Removal; Constructed Wetlands for Wastewater Treatment
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: April 14, 2025

2025 article

Data-Independent Acquisition Mass Spectrometry as a Tool for Metaproteomics: Interlaboratory Comparison Using a Model Microbiome

Rajczewski, A. T., Blakeley-Ruiz, J. A., Meyer, A., Vintila, S., Mcilvin, M. R., Bossche, T., … Jagtap, P. D. (2025, April 10). PROTEOMICS, Vol. 4.

co-author countries: Belgium 🇧🇪
author keywords: artificial microbial community; metaproteome; microbiome; microbiota; synthetic community
topics (OpenAlex): Advanced Proteomics Techniques and Applications; Mass Spectrometry Techniques and Applications; Metabolomics and Mass Spectrometry Studies
Sources: ORCID, Web Of Science, NC State University Libraries
Added: April 11, 2025

2025 article

Manipulation of targeted protein degradation in plant biology

Rojas-Pierce, M., & Bednarek, S. Y. (2025, April). BIOCHEMICAL SOCIETY TRANSACTIONS, Vol. 4.

MeSH headings : Proteolysis; Plant Proteins / metabolism; Plants / metabolism; Ubiquitination; Ubiquitin-Protein Ligases / metabolism; Proteasome Endopeptidase Complex / metabolism
topics (OpenAlex): Protein Degradation and Inhibitors; Ubiquitin and proteasome pathways; Autophagy in Disease and Therapy
Sources: ORCID, Web Of Science, NC State University Libraries
Added: April 10, 2025

2025 article

Development of ferret immune repertoire reference resources and single-cell-based high-throughput profiling assays

Walsh, E. S., Yang, K., Tollison, T. S., Seenu, S., Adams, N., Zeitoun, G., … Peng, X. (2025, March 21). JOURNAL OF VIROLOGY, Vol. 3.

By: E. Walsh n, K. Yang*, T. Tollison n, S. Seenu*, N. Adams n, G. Zeitoun*, I. Sideri*, G. Folch* ...

co-author countries: France 🇫🇷
author keywords: ferret; immune repertoire; reference resource development; VDJ annotation; single-cell sequencing; repertoire profiling
MeSH headings : Animals; Ferrets / immunology; Ferrets / genetics; Single-Cell Analysis / methods; Receptors, Antigen, T-Cell / genetics; Receptors, Antigen, T-Cell / immunology; High-Throughput Nucleotide Sequencing; Transcriptome; Lymph Nodes / immunology; Gene Expression Profiling; Spleen / immunology; Spleen / cytology
topics (OpenAlex): Single-cell and spatial transcriptomics; T-cell and B-cell Immunology; Immune Cell Function and Interaction
Sources: Web Of Science, NC State University Libraries
Added: March 31, 2025

2025 report

FINAL TECHNICAL Report: Using probability distribution function as a scaling approach to incorporate soil heterogeneity into biogeochemical models for greenhouse gas predictions (Award #: DE-SC0022314)

topics (OpenAlex): Atmospheric and Environmental Gas Dynamics
Source: ORCID
Added: March 27, 2025

2025 article

Generative frame interpolation enhances tracking of biological objects in time-lapse microscopy

Kaondal, S., Taassob, A., Jeon, S., Lee, S. H., Nuñez, H. L., Akindipe, B. A., … Argüello-Miranda, O. (2025, March 26).

By: S. Kaondal n, A. Taassob n, S. Jeon*, S. Lee*, H. Nuñez*, B. Akindipe*, H. Lee*, S. Joo*, S. Oliveira*, O. Argüello-Miranda n

co-author countries: Korea (Republic of) 🇰🇷
topics (OpenAlex): Cell Image Analysis Techniques; Image Processing Techniques and Applications; Advanced Vision and Imaging
Source: ORCID
Added: March 27, 2025

2025 journal article

A dual-functional needle-based VOC sensing platform for rapid vegetable phenotypic classification

BIOSENSORS & BIOELECTRONICS, 278.

co-author countries: Bangladesh 🇧🇩
author keywords: Volatile organic compound; Colorimetric sensor; Needle device; Vegetable; Phenotype; Smartphone
MeSH headings : Volatile Organic Compounds / analysis; Vegetables / chemistry; Biosensing Techniques / instrumentation; Biosensing Techniques / methods; Colorimetry / instrumentation; Colorimetry / methods; Limit of Detection; Needles / classification; Gas Chromatography-Mass Spectrometry; Equipment Design; Smartphone; Principal Component Analysis
topics (OpenAlex): Advanced Chemical Sensor Technologies; Gas Sensing Nanomaterials and Sensors; Insect Pheromone Research and Control
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: March 24, 2025

2025 journal article

Diagnostic-avoiding <i>Chlamydia trachomatis</i> variants detected in cervical and endometrial specimens from women during 16S microbiome profiling

BMC INFECTIOUS DISEASES, 25(1).

By: S. Jeong n, T. Tollison n, H. Brochu n, H. Chou n, T. Yu*, P. Baghaie*, K. Yount*, T. Darville* ...

author keywords: NAAT; Chlamydia; Gonorrhea; Microbiome; 16S rRNA; False negative; 23S
MeSH headings : Humans; Female; Chlamydia trachomatis / genetics; Chlamydia trachomatis / isolation & purification; Chlamydia Infections / diagnosis; Chlamydia Infections / microbiology; RNA, Ribosomal, 16S / genetics; Cervix Uteri / microbiology; Microbiota / genetics; Adult; DNA, Bacterial / genetics; Endometrium / microbiology; Gonorrhea / diagnosis; Gonorrhea / microbiology; RNA, Ribosomal, 23S / genetics; Neisseria gonorrhoeae / genetics; Neisseria gonorrhoeae / isolation & purification; Young Adult; Pennsylvania
topics (OpenAlex): Reproductive tract infections research; Syphilis Diagnosis and Treatment; Cervical Cancer and HPV Research
Sources: Web Of Science, NC State University Libraries
Added: March 24, 2025

2025 article

Linking leaf traits and litter flammability using a novel framework, tested with Brazilian Cerrado trees

Flake, S. W., Elliott, P. J., Durigan, G., Rossatto, D. R., & Hoffmann, W. A. (2025, March 23). FUNCTIONAL ECOLOGY, Vol. 3.

By: S. Flake n, P. Elliott n, G. Durigan*, D. Rossatto & W. Hoffmann n

co-author countries: Brazil 🇧🇷
author keywords: 3D scanning; aluminium; bulk density; fine fuel; fire behaviour; leaf morphology; litter; savanna
topics (OpenAlex): Forest ecology and management; Environmental and biological studies; Soil Management and Crop Yield
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: March 24, 2025

Citation Index includes data from a number of different sources. If you have questions about the sources of data in the Citation Index or need a set of data which is free to re-distribute, please contact us.

Certain data included herein are derived from the Web of Science© and InCites© (2025) of Clarivate Analytics. All rights reserved. You may not copy or re-distribute this material in whole or in part without the prior written consent of Clarivate Analytics.