Data-driven Science

NC State

Works Published in 2021

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2021 conference paper

Parameterized algorithms for identifying gene co-expression modules via weighted clique decomposition

SIAM Conference on Applied and Computational Discrete Algorithms (ACDA21), 111–122.

By: M. Cooley, C. Greene, D. Issac, M. Pividori & B. Sullivan

Source: ORCID
Added: August 6, 2022

2021 journal article

Polynomial Treedepth Bounds in Linear Colorings

Algorithmica, 83(1), 361–386.

By: J. Kun, M. O?Brien, M. Pilipczuk & B. Sullivan

Source: ORCID
Added: August 6, 2022

2021 article

Projecting genetic associations through gene expression patterns highlights disease etiology and drug mechanisms

BioRxiv.

By: M. Pividori, S. Lu, B. Li, C. Su, M. Johnson, W. Wei, Q. Feng, B. Namjou ...

Source: ORCID
Added: August 6, 2022

2021 journal article

An Updated Experimental Evaluation of Graph Bipartization Methods

ACM Journal of Experimental Algorithmics, 26.

By: T. Goodrich, E. Horton & B. Sullivan

Source: ORCID
Added: August 6, 2022

2021 article

Sparse dominating sets and balanced neighborhood partitioning

ArXiv.

By: Y. Mizutani, A. Staker & B. Sullivan

Source: ORCID
Added: August 6, 2022

2021 chapter

Secondary Structure Ensemble Analysis via Community Detection

In Association for Women in Mathematics Series (Vol. 22, pp. 55–81).

By: H. Du, M. Ferrari, C. Heitsch, F. Hurley, C. Mennicke, B. Sullivan, B. Xu

Source: ORCID
Added: August 6, 2022

2021 article

Parameterized algorithms for identifying gene co-expression modules via weighted clique decomposition

ArXiv.

By: M. Cooley, C. Greene, D. Issac, M. Pividori & B. Sullivan

Source: ORCID
Added: August 6, 2022

2021 article

Hardness of the Generalized Coloring Numbers

ArXiv.

By: M. Breen-McKay, B. Lavallee & B. Sullivan

Source: ORCID
Added: August 6, 2022

2021 article

Seeds of SEED: New Security Challenges for Persistent Memory

2021 INTERNATIONAL SYMPOSIUM ON SECURE AND PRIVATE EXECUTION ENVIRONMENT DESIGN (SEED 2021).

By: N. Ul Mustafa, Y. Xu, X. Shen & Y. Solihin

Sources: Web Of Science, ORCID
Added: June 20, 2022

2021 article

Recurrent Neural Networks Meet Context-Free Grammar: Two Birds with One Stone

2021 21ST IEEE INTERNATIONAL CONFERENCE ON DATA MINING (ICDM 2021).

By: H. Guan, U. Chaudhary, Y. Xu, L. Ning, L. Zhang & X. Shen

Sources: Web Of Science, ORCID
Added: May 2, 2022

2021 article

HPCFAIR: Enabling FAIR AI for HPC Applications

PROCEEDINGS OF THE WORKSHOP ON MACHINE LEARNING IN HIGH PERFORMANCE COMPUTING ENVIRONMENTS (MLHPC 2021).

By: G. Verma, M. Emani, C. Liao, P. Lin, T. Vanderbruggen, X. Shen, B. Chapman

Sources: Web Of Science, ORCID
Added: March 21, 2022

2021 article

HPC Ontology: Towards a Unified Ontology for Managing Training Datasets and AI Models for High-Performance Computing

PROCEEDINGS OF THE WORKSHOP ON MACHINE LEARNING IN HIGH PERFORMANCE COMPUTING ENVIRONMENTS (MLHPC 2021).

By: C. Liao, P. Lin, G. Verma, T. Vanderbruggen, M. Emani, Z. Nan, X. Shen

Sources: Web Of Science, ORCID
Added: March 21, 2022

2021 article

Toward Efficient Interactions between Python and Native Libraries

PROCEEDINGS OF THE 29TH ACM JOINT MEETING ON EUROPEAN SOFTWARE ENGINEERING CONFERENCE AND SYMPOSIUM ON THE FOUNDATIONS OF SOFTWARE ENGINEERING (ESEC/FSE '21).

By: J. Tan, Y. Chen, Z. Liu, B. Ren, S. Song, X. Shen, X. Liu

Sources: Web Of Science, ORCID
Added: March 7, 2022

2021 article

Revisit the Scalability of Deep Auto-Regressive Models for Graph Generation

2021 INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS (IJCNN).

Sources: Web Of Science, ORCID
Added: January 10, 2022

2021 journal article

UDF to SQL Translation through Compositional Lazy Inductive Synthesis

PROCEEDINGS OF THE ACM ON PROGRAMMING LANGUAGES-PACMPL, 5(OOPSLA), 1–26.

By: G. Zhang, Y. Xu, X. Shen & I. Dillig

Sources: ORCID, Web Of Science
Added: January 2, 2022

2021 journal article

Coarsening Optimization for Differentiable Programming

PROCEEDINGS OF THE ACM ON PROGRAMMING LANGUAGES-PACMPL, 5(OOPSLA), 1–27.

By: X. Shen, G. Zhang, I. Dea, S. Andow, E. Arroyo-Fang, N. Gafter, J. George, M. Grueter ...

Sources: ORCID, Web Of Science
Added: January 2, 2022

2021 article

Brief Industry Paper: Towards Real-Time 3D Object Detection for Autonomous Vehicles with Pruning Search

2021 IEEE 27TH REAL-TIME AND EMBEDDED TECHNOLOGY AND APPLICATIONS SYMPOSIUM (RTAS 2021).

By: P. Zhao, W. Niu, G. Yuan, Y. Cai, H. Sung, S. Liu, S. Liu, X. Shen ...

Sources: Web Of Science, ORCID
Added: November 29, 2021

2021 journal article

How to "DODGE" Complex Software Analytics

IEEE TRANSACTIONS ON SOFTWARE ENGINEERING, 47(10), 2182–2194.

By: A. Agrawal, W. Fu, D. Chen, X. Shen & T. Menzies

Sources: Web Of Science, ORCID
Added: November 1, 2021

2021 article

Supporting Legacy Libraries on Non-Volatile Memory: A User-Transparent Approach

2021 ACM/IEEE 48TH ANNUAL INTERNATIONAL SYMPOSIUM ON COMPUTER ARCHITECTURE (ISCA 2021).

By: C. Ye, Y. Xu, X. Shen, X. Liao, H. Jin & Y. Solihin

Sources: Web Of Science, ORCID
Added: October 26, 2021

2021 article

G-TADOC: Enabling Efficient GPU-Based Text Analytics without Decompression

2021 IEEE 37TH INTERNATIONAL CONFERENCE ON DATA ENGINEERING (ICDE 2021).

By: F. Zhang, Z. Pan, Y. Zhou, J. Zhai, X. Shen, O. Mutlu, X. Du

Sources: Web Of Science, ORCID
Added: September 20, 2021