Serovar-level identification of bacterial foodborne pathogens from full-length 16S rRNA gene sequencing
Grinevich, D., Harden, L., Thakur, S., & Callahan, B. (2024, February 6). MSYSTEMS.
author keywords: serotyping; food-borne pathogens; Salmonella; Escherichia coli; 16S rRNA; long-read sequencing
TL;DR:
A new computational technology is developed that allows the important foodborne pathogens Escherichia coli and Salmonella enterica to be serotyped (a subspecies level classification) from sequencing of a single-marker gene, and the 16S rRNA gene often used to surveil bacterial communities.
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