Works (9)
Updated: July 5th, 2023 15:59
2007 journal article
NMR assignment of the N-terminal repeat domain of Bacillus subtilis ClpC
BIOMOLECULAR NMR ASSIGNMENTS, 1(2), 163–165.
author keywords: ClpC; Bacillus subtilis; N-domain; genetic competence; HSP100/AAA+
MeSH headings : Amino Acid Sequence; Bacterial Proteins / chemistry; Connexins / chemistry; Heat-Shock Proteins / chemistry; Magnetic Resonance Spectroscopy / methods; Protein Structure, Tertiary; Repetitive Sequences, Amino Acid
TL;DR:
The backbone and side-chain assignments of the N-terminal repeat domain (residues 1–145) of ClpC from Bacillus subtilis are presented.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Structure, binding interface and hydrophobic transitions of Ca2+-loaded calbindin-D-28K
Nature Structural & Molecular Biology, 13(7), 641–647.
Source: NC State University Libraries
Added: August 6, 2018
2005 journal article
(4,2)D projection-reconstruction experiments for protein backbone assignment: Application to human carbonic anhydrase II and calbindin D-28K
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 127(24), 8785–8795.
MeSH headings : Calbindins; Carbonic Anhydrase II / chemistry; Humans; Nuclear Magnetic Resonance, Biomolecular / methods; S100 Calcium Binding Protein G / chemistry
TL;DR:
This work shows that projection-reconstruction NMR techniques can be extended to larger protonated and perdeuterated proteins and presents a suite of (4,2)D triple-resonance experiments for protein backbone assignment and a Hybrid Backprojection/Lower-Value algorithm for reconstructing data with relatively weak signal-to-noise ratios.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2005 journal article
Solution structure and dynamics of LuxU from Vibrio harveyi, a phosphotransferase protein involved in bacterial quorum sensing
JOURNAL OF MOLECULAR BIOLOGY, 347(2), 297–307.
author keywords: quorum-sensing; NMR; solution structure; LuxU; bioluminescence
MeSH headings : Amino Acid Sequence; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Binding Sites; Models, Molecular; Molecular Sequence Data; Phosphoproteins / chemistry; Phosphoproteins / genetics; Phosphoproteins / metabolism; Protein Structure, Tertiary; Sequence Alignment; Sequence Homology, Amino Acid; Vibrio / metabolism
TL;DR:
The studies described here represent the first structural characterization of an isolated, monomeric bacterial phosphotransferase protein, LuxU, which acts to shuttle the phosphate from the membrane-bound proteins, LuxN and LuxQ, to LuxO.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
14. Life Below Water
(OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2005 journal article
Structural analysis of divalent metals binding to the Bacillus subtilis response regulator Spo0F: the possibility for In vitro metalloregulation in the initiation of sporulation
BIOMETALS, 18(5), 449–466.
author keywords: metal binding; NMR spectroscopy; response regulator; sporulation; two-component signal transduction
MeSH headings : Amino Acid Sequence; Bacillus subtilis / chemistry; Bacillus subtilis / physiology; Bacterial Proteins / chemistry; Bacterial Proteins / drug effects; Calcium / chemistry; Calcium / pharmacology; Copper / chemistry; Copper / pharmacology; Crystallography, X-Ray; In Vitro Techniques; Magnesium / chemistry; Magnesium / pharmacology; Magnetic Resonance Spectroscopy / methods; Magnetic Resonance Spectroscopy / standards; Manganese / chemistry; Manganese / pharmacology; Models, Molecular; Molecular Sequence Data; Phosphorylation / drug effects; Protein Binding; Protein Conformation; Protein Kinases / chemistry; Protein Kinases / drug effects; Reference Standards; Signal Transduction / drug effects; Signal Transduction / physiology; Spectrometry, Mass, Electrospray Ionization / methods; Spores, Bacterial / metabolism; Structure-Activity Relationship
TL;DR:
Metal binding studies of the Bacillus subtilis response regulator Spo0F using NMR and μESI-MS show that the divalent metals Ca2+, Mg2+ and Mn2+ primarily bind, as expected, in the Asp pocket phosphorylation site, while Cu2+ fails to support KinA phosphotransfer.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2004 article
Sub-classification of response regulators using the surface characteristics of their receiver domains (FEBS 27785) (vol 554, pg 231, 2003)
Kojetin, D. J., Thompson, R. J., & Cavanagh, J. (2004, February 27). FEBS LETTERS, Vol. 560, pp. 227–228.
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2003 journal article
Calbindin D-28K interacts with Ran-binding protein M: identification of interacting domains by NMR spectroscopy
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 303(4), 1186–1192.
MeSH headings : Adaptor Proteins, Signal Transducing; Amino Acid Sequence; Binding Sites; Calbindins; Cytoskeletal Proteins; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Nuclear Proteins / chemistry; Nuclear Proteins / metabolism; Precipitin Tests; Protein Structure, Tertiary; S100 Calcium Binding Protein G / chemistry; S100 Calcium Binding Protein G / metabolism; ran GTP-Binding Protein / chemistry; ran GTP-Binding Protein / metabolism
TL;DR:
Using NMR methods, a peptide, LASIKNR, derived from Ran-binding protein M, interacts with several regions of the calcium-loaded calbindin D(28K) including the amino terminus and two other regions that exhibit conformational exchange on the NMR timescale.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2003 journal article
Sub-classification of response regulators using the surface characteristics of their receiver domains
FEBS LETTERS, 554(3), 231–236.
author keywords: OmpR sub-families; homology modeling
MeSH headings : Bacillus subtilis / chemistry; Bacillus subtilis / metabolism; Bacterial Proteins / chemistry; Bacterial Proteins / classification; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Escherichia coli / chemistry; Escherichia coli / metabolism; Genes, Regulator; Histidine Kinase; Hydrophobic and Hydrophilic Interactions; Models, Molecular; Protein Kinases / genetics; Protein Kinases / metabolism; Protein Structure, Secondary; Protein Structure, Tertiary; Structural Homology, Protein; Trans-Activators / chemistry; Trans-Activators / classification; Trans-Activators / genetics
TL;DR:
Comparison based homology modeling of the receiver domains of the OmpR sub‐family of response regulators in Bacillus subtilis and Escherichia coli suggests further sub‐classification is possible.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2002 journal article
Alternative splicing of a beta(4) subunit proline-rich motif regulates voltage-dependent gating and toxin block of Ca(v)2.1 Ca2+ channels
Journal of Neuroscience, 22(21), 9331–9339.
MeSH headings : Alternative Splicing / physiology; Amino Acid Motifs / physiology; Animals; Brain / metabolism; Calcium Channel Blockers / pharmacology; Calcium Channels, N-Type / drug effects; Calcium Channels, N-Type / genetics; Calcium Channels, N-Type / metabolism; Humans; Ion Channel Gating / drug effects; Ion Channel Gating / physiology; Membrane Potentials / physiology; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Nerve Tissue Proteins / genetics; Oocytes / metabolism; Organ Specificity; Patch-Clamp Techniques; Protein Structure, Tertiary / physiology; Protein Subunits / drug effects; Protein Subunits / genetics; Protein Subunits / metabolism; RNA, Messenger / metabolism; Sequence Deletion; Sequence Homology, Amino Acid; Spinal Cord / metabolism; Structure-Activity Relationship; Xenopus laevis; omega-Conotoxins / pharmacology
TL;DR:
The models reveal that alternative splicing of the β4 N terminus results in dramatic differences in surface charge distribution and localize the proline-rich motif of β4b to an extended arm structure that flanks what would be the equivalent of a highly modified PSD-95 carboxylate binding loop.
(via Semantic Scholar)
Source: NC State University Libraries
Added: August 6, 2018
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