Recent Works

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Sorted by most recent date added to the index first, which may not be the same as publication date order.

2025 journal article

Qu-1: a transformation-and regeneration-amenable doubled haploid cell line with a reference genome sequence for genetic and functional studies in <i>Populus</i>

FORESTRY RESEARCH, 5.

By: C. Liu, M. Wang, E. Fan, S. Wang, S. Li, P. Fu, Y. Liu, Y. Liu ...

topics (OpenAlex): Plant tissue culture and regeneration; Chromosomal and Genetic Variations; Plant Molecular Biology Research
Source: Web Of Science
Added: May 27, 2025

2025 journal article

Structural and kinetic characterization of an acetoacetyl-Coenzyme A: acetate Coenzyme A transferase from the extreme thermophile Thermosipho melanesiensis

BIOCHEMICAL JOURNAL, 482(4), 225–240.

By: R. Bing n, G. Buhrman n, K. Ford n, C. Straub n, T. Laemthong n, R. Rose n, M. Adams, R. Kelly n

MeSH headings : Kinetics; Acyl Coenzyme A / metabolism; Acyl Coenzyme A / chemistry; Coenzyme A-Transferases / chemistry; Coenzyme A-Transferases / metabolism; Coenzyme A-Transferases / genetics; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Bacterial Proteins / genetics; Crystallography, X-Ray; Acetyl Coenzyme A / metabolism; Acetyl Coenzyme A / chemistry; Acetates / metabolism; Substrate Specificity; Recombinant Proteins / chemistry; Recombinant Proteins / metabolism; Recombinant Proteins / genetics; Firmicutes / enzymology
topics (OpenAlex): Microbial Metabolic Engineering and Bioproduction; Enzyme Structure and Function; Biochemical and Molecular Research
Sources: Web Of Science, NC State University Libraries
Added: April 14, 2025

2025 journal article

Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation

NATURE COMMUNICATIONS, 16(1).

co-author countries: Denmark 🇩🇰 Spain 🇪🇸 Norway 🇳🇴

Contributors: J. Rivas-Fernández*, M. Vuillemin*, B. Pilgaard*, L. Klau*, F. Fredslund*, C. Lund-Hanssen*, D. Welner*, A. Meyer* ...

MeSH headings : Polysaccharide-Lyases / metabolism; Polysaccharide-Lyases / chemistry; Alginates / chemistry; Alginates / metabolism; Catalytic Domain; Crystallography, X-Ray; Kinetics; Magnetic Resonance Spectroscopy; Models, Molecular
topics (OpenAlex): Seaweed-derived Bioactive Compounds; Enzyme Production and Characterization; Polysaccharides and Plant Cell Walls
Sources: ORCID, Web Of Science, NC State University Libraries
Added: March 18, 2025

2025 journal article

SEGS-1 episomes generated during cassava mosaic disease enhance disease severity

FRONTIERS IN PLANT SCIENCE, 15.

co-author countries: Kenya 🇰🇪 Tanzania, United Republic of 🇹🇿
author keywords: cassava mosaic begomovirus; cassava mosaic disease; CMD; SEGS-1; resistance
topics (OpenAlex): Cassava research and cyanide; Plant Virus Research Studies; Plant Pathogenic Bacteria Studies
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Source: Web Of Science
Added: February 17, 2025

2025 article

<i>Journal of Applied Crystallography</i> welcomes eight new Co-editors

Hajdu, J., McIntyre, G. J., & Meilleur, F. (2025, January). JOURNAL OF APPLIED CRYSTALLOGRAPHY, Vol. 58, pp. 1–3.

co-author countries: Australia 🇦🇺 Czechia 🇨🇿 Sweden 🇸🇪

Contributors: J. Hajdu*, G. Mcintyre* & F. Meilleur n

author keywords: Co-editors; applied crystallography; structural science
topics (OpenAlex): Crystallization and Solubility Studies; X-ray Diffraction in Crystallography
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
4. Quality Education (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: January 30, 2025

2025 article

Nondestructive Detection and Quantification of Dysprosium in Plant Tissues

Hernández-Pagán, E., Laosuntisuk, K., Harris, A. T., Haynes, A. N., Buitrago, D., Rajabu, C., … Doherty, C. J. (2025, January 8).

By: E. Hernández-Pagán n, K. Laosuntisuk n, A. Harris n, A. Haynes n, D. Buitrago n, C. Rajabu n, M. Kudenov n, C. Doherty n

topics (OpenAlex): Geochemistry and Elemental Analysis
Source: ORCID
Added: January 8, 2025

2024 journal article

A nearly gapless, highly contiguous reference genome for a doubled haploid line of<i> Populus</i><i> ussuriensis,</i> enabling advanced genomic studies

FORESTRY RESEARCH, 4.

By: W. Liu, C. Liu, S. Chen, M. Wang, X. Wang, Y. Yu, R. Sederoff*, H. Wei ...

co-author countries: China 🇨🇳
topics (OpenAlex): Chromosomal and Genetic Variations; Bioenergy crop production and management; Plant Molecular Biology Research
Source: Web Of Science
Added: January 13, 2025

2024 journal article

An Arabidopsis Cell Culture With Weak Circadian Rhythms Under Constant Light Compared With Constant Dark Can Be Rescued by ELF3

PLANT DIRECT, 8(11), 1–16.

author keywords: callus; circadian clock; circadian rhythms; ELF3; gene expression
topics (OpenAlex): Light effects on plants; Plant Molecular Biology Research; Photosynthetic Processes and Mechanisms
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: November 28, 2024

2024 journal article

Efficacy of banana fibre paper for the management of the root-knot nematode,<i> Meloidogyne</i><i> incognita,</i> on potato (<i> Solanum</i><i> tuberosum)</i> in Kenya

NEMATOLOGY, 27(1), 25–36.

By: D. Kamau*, W. Waceke*, L. Cortada*, O. Mwaura*, T. Pirzada n, T. Sit n, E. Davis n, D. Guenther n ...

co-author countries: Belgium 🇧🇪 Kenya 🇰🇪
author keywords: abamectin; biological control; environmental sustainability; lignocellulose matrix; Meloidogyne spp.; plant-parasitic nematodes; Pratylenchus spp.; soil disease management; sub-Saharan Africa; Trichoderma asperellum; Wrap & Plant
topics (OpenAlex): Nematode management and characterization studies; Banana Cultivation and Research; Cassava research and cyanide
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: November 22, 2024

2024 journal article

Metabolic regulation of the glioblastoma stem cell epitranscriptome by malate dehydrogenase 2

CELL METABOLISM, 36(11).

co-author countries: Canada 🇨🇦 China 🇨🇳
MeSH headings : Glioblastoma / metabolism; Glioblastoma / pathology; Glioblastoma / genetics; Neoplastic Stem Cells / metabolism; Neoplastic Stem Cells / pathology; Humans; Malate Dehydrogenase / metabolism; Malate Dehydrogenase / genetics; Animals; Mice; Transcriptome; Cell Line, Tumor; Brain Neoplasms / metabolism; Brain Neoplasms / pathology; Brain Neoplasms / genetics; Gene Expression Regulation, Neoplastic; Cell Proliferation / drug effects
topics (OpenAlex): RNA modifications and cancer; Cancer, Hypoxia, and Metabolism; Epigenetics and DNA Methylation
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: November 18, 2024

2024 article

Identification and characterization of substrate- and product-selective nylon hydrolases

Drufva, E. E., Cahill, J. F., Saint-Vincent, P. M. B., Williams, A. N., Bocharova, V., Capra, N., … Michener, J. K. (2024, November 14).

co-author countries: Japan 🇯🇵
topics (OpenAlex): biodegradable polymer synthesis and properties; Microplastics and Plastic Pollution; Enzyme Structure and Function
Source: ORCID
Added: November 14, 2024

2024 article

Quantitation of metabolic activity from isotope tracing data using automated methodology

Liu, S., Liu, X., & Locasale, J. W. (2024, October 25). NATURE METABOLISM.

topics (OpenAlex): Metabolomics and Mass Spectrometry Studies; Diet and metabolism studies; Metabolism and Genetic Disorders
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: November 12, 2024

2024 article

Assembly of a Heterobimetallic Fe/Mn Cofactor in the <i>para</i>-Aminobenzoate Synthase Chlamydia Protein Associating with Death Domains (CADD) Initiates Long-Range Radical Hole-Hopping

Phan, H. N., Swartz, P. D., Gangopadhyay, M., Guo, Y., Smirnov, A. I., & Makris, T. M. (2024, October 29). BIOCHEMISTRY, Vol. 10.

By: H. Phan n, P. Swartz n, M. Gangopadhyay*, Y. Guo*, A. Smirnov n & T. Makris n

MeSH headings : Manganese / metabolism; Manganese / chemistry; Iron / metabolism; Iron / chemistry; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Bacterial Proteins / genetics; Chlamydia trachomatis / enzymology; Chlamydia trachomatis / metabolism; Crystallography, X-Ray; Catalytic Domain; Models, Molecular; 4-Aminobenzoic Acid / chemistry; 4-Aminobenzoic Acid / metabolism; Electron Spin Resonance Spectroscopy
topics (OpenAlex): Metal-Catalyzed Oxygenation Mechanisms; Porphyrin Metabolism and Disorders; Enzyme Structure and Function
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Sources: ORCID, Web Of Science, NC State University Libraries
Added: October 29, 2024

2024 article

Transcriptional response of laboratory-reared Mexican fruit flies (<i>Anastrepha ludens</i> Loew) to desiccation

Zamora-Briseno, J. A., Schunke, J. M., Arteaga-Vazquez, M. A., Arredondo, J., Tejeda, M. T., Ascencio-Ibanez, J. T., & Diaz-Fleischer, F. (2024, September 19). BULLETIN OF ENTOMOLOGICAL RESEARCH.

co-author countries: Mexico 🇲🇽
author keywords: insect; molecular entomology; Tephritidae; transcriptome; water stress
MeSH headings : Animals; Tephritidae / genetics; Tephritidae / physiology; Female; Male; Desiccation; Transcriptome; Gene Expression Profiling; Stress, Physiological
topics (OpenAlex): Insect behavior and control techniques; Neurobiology and Insect Physiology Research; Insect Utilization and Effects
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Source: Web Of Science
Added: September 30, 2024

2024 journal article

Prepandemic Factors Associated With Pandemic Impact and Psychosocial Distress Among Mothers of Young Children

Academic Pediatrics, 24(7), 1076–1085.

author keywords: anxiety; children; COVID-19; maternal stress; pandemic; psychosocial stress
MeSH headings : Humans; COVID-19 / psychology; COVID-19 / epidemiology; Mothers / psychology; Female; Child, Preschool; Child; Psychological Distress; Infant; Adult; Financial Stress / psychology; Anxiety / epidemiology; Anxiety / psychology; SARS-CoV-2; Social Support; Stress, Psychological / epidemiology; Stress, Psychological / psychology; United States / epidemiology; Pandemics; Infant, Newborn; Male; Educational Status
topics (OpenAlex): COVID-19 and Mental Health; Maternal Mental Health During Pregnancy and Postpartum; Family Support in Illness
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
5. Gender Equality (Web of Science)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: September 9, 2024

2024 journal article

Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B

BIOCHEMISTRY, 63(14), 1761–1773.

By: M. Aktar n, V. Serrano n, R. Ghiladi n & S. Franzen n

MeSH headings : Crystallography, X-Ray; Substrate Specificity; Binding Sites; Peroxidases / chemistry; Peroxidases / metabolism; Catalytic Domain; Models, Molecular; Protein Conformation; Animals; Kinetics
topics (OpenAlex): Heme Oxygenase-1 and Carbon Monoxide; Hemoglobin structure and function; Metal-Catalyzed Oxygenation Mechanisms
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: July 22, 2024

2024 review

Stable Isotope Tracing Analysis in Cancer Research: Advancements and Challenges in Identifying Dysregulated Cancer Metabolism and Treatment Strategies

[Review of ]. METABOLITES, 14(6).

author keywords: stable isotope tracing; high resolution mass spectrometry; cancer metabolism
topics (OpenAlex): Metabolomics and Mass Spectrometry Studies; Cancer, Hypoxia, and Metabolism; Mitochondrial Function and Pathology
Source: Web Of Science
Added: July 8, 2024

2024 journal article

Targeting glutamine metabolism improves sarcoma response to radiation therapy in vivo

COMMUNICATIONS BIOLOGY, 7(1).

co-author countries: Canada 🇨🇦
MeSH headings : Animals; Glutamine / metabolism; Mice; Glutaminase / metabolism; Glutaminase / genetics; Glutaminase / antagonists & inhibitors; Sarcoma / metabolism; Sarcoma / radiotherapy; Sarcoma / genetics; Glucose / metabolism; Disease Models, Animal; Radiation Tolerance
topics (OpenAlex): Cancer, Hypoxia, and Metabolism; Cancer Research and Treatments; Glioma Diagnosis and Treatment
Source: Web Of Science
Added: June 3, 2024

2024 journal article

Data-dependent and -independent acquisition lipidomics analysis reveals the tissue-dependent effect of metformin on lipid metabolism

METABOLOMICS, 20(3).

author keywords: Metformin; Intestinal metabolism; Lipidomics; DIA
MeSH headings : Metformin / pharmacology; Metformin / metabolism; Animals; Mice; Male; Lipidomics / methods; Lipid Metabolism / drug effects; Lipids / blood; Hypoglycemic Agents / pharmacology; Hypoglycemic Agents / metabolism; Mice, Inbred C57BL; Tandem Mass Spectrometry / methods
topics (OpenAlex): Metabolomics and Mass Spectrometry Studies; Advanced Proteomics Techniques and Applications; Metabolism, Diabetes, and Cancer
Sources: Web Of Science, NC State University Libraries
Added: May 20, 2024

2024 article

Modulation of functional activity of heat-stressed chicken macrophages by poultry-derived probiotic lactobacilli

Abdelaziz, K., Nixon, T., Joye, A., Hassan, H., Alizadeh, M., Sharif, S., & Kulkarni, R. R. (2024, April 9). CANADIAN JOURNAL OF ANIMAL SCIENCE, Vol. 4.

co-author countries: Canada 🇨🇦
author keywords: chicken; Lactobacillus; macrophage; cytokine; TLR; heat stress
topics (OpenAlex): Animal Nutrition and Physiology; Meat and Animal Product Quality; Effects of Environmental Stressors on Livestock
Sources: Web Of Science, NC State University Libraries
Added: April 15, 2024

2024 journal article

Mitigating Illumination-, Leaf-, and View-Angle Dependencies in Hyperspectral Imaging Using Polarimetry

Plant Phenomics.

topics (OpenAlex): Optical Polarization and Ellipsometry; Remote-Sensing Image Classification; Remote Sensing in Agriculture
Source: ORCID
Added: April 1, 2024

2024 article

Regulation of urea cycle by reversible high-stoichiometry lysine succinylation

Zhang, R., Fang, J., Xie, X., Carrico, C., Meyer, J. G., Wei, L., … Verdin, E. (2024, March 6). NATURE METABOLISM.

co-author countries: China 🇨🇳
MeSH headings : Mice; Animals; Lysine / chemistry; Lysine / metabolism; Ammonia; Sirtuins / metabolism; Mice, Knockout; Urea
topics (OpenAlex): Sirtuins and Resveratrol in Medicine; Cancer, Hypoxia, and Metabolism; Autophagy in Disease and Therapy
Source: Web Of Science
Added: April 1, 2024

2024 article

Variation in Biosynthesis and Metal-Binding Properties of Isonitrile-Containing Peptides Produced by Mycobacteria versus Streptomyces

Chen, T.-Y., Chen, J., Ruszczycky, M. W., Hilovsky, D., Hostetler, T., Liu, X., … Chang, W.-chen. (2024, March 19). ACS CATALYSIS, Vol. 3.

By: T. Chen n, J. Chen*, M. Ruszczycky*, D. Hilovsky n, T. Hostetler n, X. Liu n, J. Zhou*, W. Chang n

co-author countries: China 🇨🇳
author keywords: isonitriles; Fe/2OG enzymes; metallophores; Mycobacterium; natural products
topics (OpenAlex): Microbial Natural Products and Biosynthesis; Chemical Synthesis and Analysis; RNA and protein synthesis mechanisms
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: April 1, 2024

2024 journal article

Fructose regulates the pentose phosphate pathway and induces an inflammatory and resolution phenotype in Kupffer cells

SCIENTIFIC REPORTS, 14(1).

MeSH headings : Child; Humans; Kupffer Cells / metabolism; Fructose / metabolism; Pentose Phosphate Pathway; Matrix Metalloproteinase 12 / metabolism; Liver / metabolism; Non-alcoholic Fatty Liver Disease / pathology; Fibrosis; Phenotype
topics (OpenAlex): Diet, Metabolism, and Disease; Liver Disease Diagnosis and Treatment; Diet and metabolism studies
TL;DR: It is demonstrated that chronic fructose diet decreased Kupffer cell populations while increasing transitioning monocytes and upregulating resolution and anti-inflammatory associated genes in Kupffer cells. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: March 25, 2024

2024 article

Complete genome sequences of <i>Lactobacillus acidophilus</i> strain P42 and <i>Limosilactobacillus reuteri</i> strain P43 isolated from chicken cecum

Hassan, H. M., Mendoza, M., & Dickey, A. N. (2024, March 19). (J. C. D. Hotopp, Ed.). MICROBIOLOGY RESOURCE ANNOUNCEMENTS, Vol. 3.

By: H. Hassan n, M. Mendoza n & A. Dickey n

Ed(s): J. Hotopp

author keywords: complete genome; PacBio HiFi reads; L. acidophilus P42; L. reuteriP43; poultry
topics (OpenAlex): Probiotics and Fermented Foods; Genomics and Phylogenetic Studies; Bacteriophages and microbial interactions
TL;DR: The complete circular genome sequences of Lactobacillus acidophilus strain P42 and Limosilactobacillus reuteri strain P43 isolated from chicken cecal samples are reported and could potentially serve as poultry probiotic strains. (via Semantic Scholar)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: March 22, 2024

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