Recent Works

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Sorted by most recent date added to the index first, which may not be the same as publication date order.

2025 article

Assessing the effect of spaceflight stress on DNA sequence mutation using RNA-sequencing data

By: M. Knight n, C. Doherty n & D. Nielsen n

topics (OpenAlex):
Sources: NC State University Libraries, NC State University Libraries
Added: December 14, 2025

2025 article

A <scp>TIR</scp> ‐ <scp>NLR</scp> gene from Arabidopsis Pla‐1 confers resistance to geminivirus infection

co-author countries: Tanzania, United Republic of 🇹🇿
topics (OpenAlex):
Sources: NC State University Libraries, NC State University Libraries
Added: December 7, 2025

2025 article

Expanding frontiers: harnessing plant biology for space exploration and planetary sustainability

By: L. Fountain*, M. Gilliham*, C. Amitrano*, N. Arouna*, R. Barker*, M. Böhmer*, M. Braun*, N. Brereton* ...

co-author countries: Australia 🇦🇺 Canada 🇨🇦 Germany 🇩🇪 Spain 🇪🇸 France 🇫🇷 United Kingdom of Great Britain and Northern Ireland 🇬🇧 Ireland 🇮🇪 India 🇮🇳 Italy 🇮🇹 Japan 🇯🇵 Netherlands 🇳🇱 Russian Federation 🇷🇺
topics (OpenAlex):
Sources: NC State University Libraries, NC State University Libraries
Added: November 27, 2025

2025 article

Solvatochromic BODIPYs with Polarity-Independent Absorption for Functional Super-resolution Imaging of Live Cell Membranes

Chemical & Biomedical Imaging.

By: Y. Liu n, G. Xiayi n, B. Yoder n, J. Gluck n, N. Vinueza n, X. Liu n, Y. Zhang n

topics (OpenAlex): Luminescence and Fluorescent Materials; Advanced Fluorescence Microscopy Techniques; Random lasers and scattering media
Sources: NC State University Libraries, NC State University Libraries, ORCID
Added: November 19, 2025

2025 journal article

Transcriptomic analysis reveals time-of-day-specific genes and gene regulatory networks in response to chilling stress in sorghum

Plant Physiology Reports.

By: K. Laosuntisuk, A. Vennapusa, I. Somayanda, S. Jagadish & C. Doherty*

topics (OpenAlex):
Source: ORCID
Added: November 5, 2025

2025 article

Development of Modular Geminivirus-Based Vectors for High Cargo Expression and Gene Targeting in Plants

Neubauer, M., Vollen, K., Zhao, C., Ascencio-Ibanez, J. T., Hanley-Bowdoin, L., Stepanova, A. N., & Alonso, J. M. (2025, September 21). PLANT BIOTECHNOLOGY JOURNAL, Vol. 9.

author keywords: beet curly top virus; geminivirus; gene editing; GoldenBraid; transient expression; viral vectors
topics (OpenAlex): Plant Virus Research Studies; CRISPR and Genetic Engineering; Virus-based gene therapy research
Sources: Web Of Science, NC State University Libraries, ORCID
Added: September 29, 2025

2025 journal article

Physiological and molecular responses to high-temperature stress at anthesis in Brazilian flooded rice

AOB PLANTS, 17(5).

By: S. Luz Correia*, K. Laosuntisuk n, J. Desai n, P. Silva*, C. Delatorre* & C. Doherty n

co-author countries: Brazil 🇧🇷 Thailand 🇹🇭

Ed(s): K. McCulloh & S. Ganie

author keywords: heat stress; RNA-Seq; transcriptional heat responses; physiological heat responses; spikelet fertility; Brazilian flooded rice
topics (OpenAlex): GABA and Rice Research; Rice Cultivation and Yield Improvement
Sources: ORCID, Web Of Science, NC State University Libraries
Added: September 20, 2025

2025 journal article

Identification and characterization of substrate-and product-selective nylon hydrolases

CHEM CATALYSIS, 5(8).

By: E. Drufva, J. Cahill, P. Saint-Vincent, A. Williams, V. Bocharova, N. Capra, F. Meilleur*, D. Carper ...

topics (OpenAlex): biodegradable polymer synthesis and properties; Enzyme Catalysis and Immobilization; Microplastics and Plastic Pollution
Sources: Web Of Science, NC State University Libraries
Added: September 8, 2025

2025 article

Recent insights into the implications of UGDH mutations for human developmental disease

Harwood, H., Zimmer, B. M., Utz, A. R., Barycki, J. J., & Simpson, M. A. (2025, August 28). BIOCHEMICAL SOCIETY TRANSACTIONS, Vol. 8.

MeSH headings : Humans; Mutation; Uridine Diphosphate Glucose Dehydrogenase / genetics; Uridine Diphosphate Glucose Dehydrogenase / metabolism; Animals; Congenital Disorders of Glycosylation / genetics
topics (OpenAlex): Glycosylation and Glycoproteins Research; Carbohydrate Chemistry and Synthesis; Metabolism and Genetic Disorders
Sources: ORCID, Web Of Science, NC State University Libraries
Added: August 29, 2025

2025 article

Characterization of an isobutylene epoxide hydrolase (IbcK) from the isobutylene-catabolizing bacterium <i>Mycolicibacterium</i> sp. ELW1

Faulkner, N. W., Joyce, J. B., Smith, C., Swartz, P., Rose, R. B., Miller, E. S., & Hyman, M. R. (2025, August 26). (M. Vives, Ed.). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 8.

By: N. Faulkner n, J. Joyce n, C. Smith n, P. Swartz n, R. Rose n, E. Miller n, M. Hyman n

Ed(s): M. Vives

author keywords: epoxide hydrolase; isobutylene; isobutylene oxide; MTBE; alkenes; bioremediation
topics (OpenAlex): Microbial Metabolic Engineering and Bioproduction; Enzyme Catalysis and Immobilization; Pharmacogenetics and Drug Metabolism
Sources: ORCID, Web Of Science, NC State University Libraries
Added: August 26, 2025

2025 journal article

Comparison of transcriptional activity profiling by metabolic labeling or nuclear RNA sequencing

PLANT JOURNAL, 123(3).

author keywords: transcriptional activity; nuclear RNA; metabolic labeling; 5-ethynyl uridine; newly synthesized RNA; <fixed-case><italic>Zea mays</italic></fixed-case>; maize; introns; non-coding genes; cellular RNA
topics (OpenAlex): RNA modifications and cancer; Genomics and Chromatin Dynamics; Bioinformatics and Genomic Networks
Sources: Web Of Science, NC State University Libraries
Added: August 25, 2025

2025 article

The Heme Oxygenase-Like Diiron Enzyme HrmI Reveals Altered Regulatory Mechanisms for Dioxygen Activation and Substrate N-Oxygenation

Skirboll, S. S., Gangopadhyay, M., Phan, H. N., Hartsell, J., Mudireddy, A., Hilovsky, D., … Makris, T. M. (2025, August 7). JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, Vol. 8.

By: S. Skirboll n, M. Gangopadhyay*, H. Phan n, J. Hartsell n, A. Mudireddy n, D. Hilovsky n, P. Swartz n, X. Liu n, Y. Guo*, T. Makris n

topics (OpenAlex): Metal-Catalyzed Oxygenation Mechanisms; Porphyrin and Phthalocyanine Chemistry; Radioactive element chemistry and processing
Sources: ORCID, Web Of Science, NC State University Libraries
Added: August 8, 2025

2025 journal article

CEPR1 regulates <i>Arabidopsis thaliana</i> root architecture by modulating auxin production via NIT1

PLANT JOURNAL, 123(2).

By: A. Frisbey*, T. Nash n, M. Goshe n, S. Clouse n, C. Frost* & F. Tax*

author keywords: <italic>Arabidopsis thaliana</italic>; auxin biosynthesis; carbon; CEPR1; lateral root development; NITRILASE 1; nitrogen
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis / growth & development; Arabidopsis Proteins / metabolism; Arabidopsis Proteins / genetics; Indoleacetic Acids / metabolism; Plant Roots / growth & development; Plant Roots / genetics; Plant Roots / metabolism; Plant Roots / anatomy & histology; Nitrogen / metabolism; Aminohydrolases / metabolism; Aminohydrolases / genetics; Gene Expression Regulation, Plant; Carbon / metabolism; Mutation; Receptor Protein-Tyrosine Kinases / metabolism; Receptor Protein-Tyrosine Kinases / genetics; Signal Transduction; Phenotype
topics (OpenAlex): Plant nutrient uptake and metabolism; Plant Molecular Biology Research; Plant Reproductive Biology
Source: Web Of Science
Added: July 21, 2025

2025 article

Engineering Arabidopsis Against Geminiviruses

Iyer, P., Keeley, R., & Ascencio-Ibanez, T. (2025, May). JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 301.

By: P. Iyer, R. Keeley & T. Ascencio-Ibanez*

author keywords: Geminiviruses; Arabidopsis; Transformation; Resistance; Aptamer
topics (OpenAlex): Plant Virus Research Studies
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Web Of Science
Added: July 21, 2025

2025 article

Geminivirus infection may systemically downregulate Arabidopsis response regulator 7 expression in cellular regions surrounding plant vasculature to stimulate cytokinin-mediated growth conditions that support viral genome replication

Mastrovito, N., Ascencio-Ibanez, J., & Munshi, A. (2025, May). JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 301.

By: N. Mastrovito, J. Ascencio-Ibanez & A. Munshi

author keywords: Virology; Plants; Food; Colocalization; Microscopy
topics (OpenAlex): Plant Virus Research Studies; Agronomic Practices and Intercropping Systems
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Web Of Science
Added: July 21, 2025

2025 article

Replication Timing Uncovers a Two-Compartment Nuclear Architecture of Interphase Euchromatin in Maize

Akram, H. S., Wear, E. E., Mickelson-Young, L., Turpin, Z. M., Hanley-Bowdoin, L., Thompson, W. F., … Bass, H. W. (2025, July 17). Biorxiv.

topics (OpenAlex): Chromosomal and Genetic Variations; Genomics and Chromatin Dynamics; RNA and protein synthesis mechanisms
Source: ORCID
Added: July 17, 2025

2025 journal article

Qu-1: a transformation-and regeneration-amenable doubled haploid cell line with a reference genome sequence for genetic and functional studies in <i>Populus</i>

FORESTRY RESEARCH, 5.

By: C. Liu*, M. Wang*, E. Fan*, S. Wang*, S. Li*, P. Fu*, Y. Liu*, Y. Liu* ...

co-author countries: China 🇨🇳
topics (OpenAlex): Plant tissue culture and regeneration; Chromosomal and Genetic Variations; Plant Molecular Biology Research
Source: Web Of Science
Added: May 27, 2025

2025 journal article

A comparison of genomic methods to assess DNA replication timing

SCIENTIFIC REPORTS, 15(1).

By: E. Wheeler n, L. Mickelson-Young n, E. Wear n, M. Burroughs n, H. Bass*, L. Concia, W. Thompson n, L. Hanley-Bowdoin n

MeSH headings : DNA Replication Timing; Genomics / methods; Humans; DNA Replication; S Phase / genetics; Deoxyuridine / analogs & derivatives; G1 Phase / genetics; Cell Nucleus / genetics
topics (OpenAlex): DNA Repair Mechanisms; Cancer Genomics and Diagnostics; Genomics and Chromatin Dynamics
Sources: ORCID, Web Of Science, NC State University Libraries
Added: May 22, 2025

2025 journal article

Structural and kinetic characterization of an acetoacetyl-Coenzyme A: acetate Coenzyme A transferase from the extreme thermophile Thermosipho melanesiensis

BIOCHEMICAL JOURNAL, 482(4), 225–240.

By: R. Bing n, G. Buhrman n, K. Ford n, C. Straub n, T. Laemthong n, R. Rose n, M. Adams, R. Kelly n

MeSH headings : Kinetics; Acyl Coenzyme A / metabolism; Acyl Coenzyme A / chemistry; Coenzyme A-Transferases / chemistry; Coenzyme A-Transferases / metabolism; Coenzyme A-Transferases / genetics; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Bacterial Proteins / genetics; Crystallography, X-Ray; Acetyl Coenzyme A / metabolism; Acetyl Coenzyme A / chemistry; Acetates / metabolism; Substrate Specificity; Recombinant Proteins / chemistry; Recombinant Proteins / metabolism; Recombinant Proteins / genetics; Firmicutes / enzymology
topics (OpenAlex): Microbial Metabolic Engineering and Bioproduction; Enzyme Structure and Function; Biochemical and Molecular Research
Sources: Web Of Science, NC State University Libraries
Added: April 14, 2025

2025 journal article

Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation

NATURE COMMUNICATIONS, 16(1).

co-author countries: Denmark 🇩🇰 Spain 🇪🇸 Norway 🇳🇴

Contributors: J. Rivas-Fernández*, M. Vuillemin*, B. Pilgaard*, L. Klau*, F. Fredslund*, C. Lund-Hanssen*, D. Welner*, A. Meyer* ...

MeSH headings : Polysaccharide-Lyases / metabolism; Polysaccharide-Lyases / chemistry; Alginates / chemistry; Alginates / metabolism; Catalytic Domain; Crystallography, X-Ray; Kinetics; Magnetic Resonance Spectroscopy; Models, Molecular
topics (OpenAlex): Seaweed-derived Bioactive Compounds; Enzyme Production and Characterization; Polysaccharides and Plant Cell Walls
Sources: ORCID, Web Of Science, NC State University Libraries
Added: March 18, 2025

2025 journal article

SEGS-1 episomes generated during cassava mosaic disease enhance disease severity

FRONTIERS IN PLANT SCIENCE, 15.

co-author countries: Kenya 🇰🇪 Tanzania, United Republic of 🇹🇿
author keywords: cassava mosaic begomovirus; cassava mosaic disease; CMD; SEGS-1; resistance
topics (OpenAlex): Cassava research and cyanide; Plant Virus Research Studies; Plant Pathogenic Bacteria Studies
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Source: Web Of Science
Added: February 17, 2025

2025 article

<i>Journal of Applied Crystallography</i> welcomes eight new Co-editors

Hajdu, J., McIntyre, G. J., & Meilleur, F. (2025, January). JOURNAL OF APPLIED CRYSTALLOGRAPHY, Vol. 58, pp. 1–3.

co-author countries: Australia 🇦🇺 Czechia 🇨🇿 Sweden 🇸🇪

Contributors: J. Hajdu*, G. Mcintyre* & F. Meilleur n

author keywords: Co-editors; applied crystallography; structural science
topics (OpenAlex): Crystallization and Solubility Studies; X-ray Diffraction in Crystallography
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
4. Quality Education (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: January 30, 2025

2025 article

Nondestructive Detection and Quantification of Dysprosium in Plant Tissues

Hernández-Pagán, E., Laosuntisuk, K., Harris, A. T., Haynes, A. N., Buitrago, D., Rajabu, C., … Doherty, C. J. (2025, January 8).

By: E. Hernández-Pagán n, K. Laosuntisuk n, A. Harris n, A. Haynes n, D. Buitrago n, C. Rajabu n, M. Kudenov n, C. Doherty n

topics (OpenAlex): Geochemistry and Elemental Analysis
Source: ORCID
Added: January 8, 2025

2024 report

Neutrons in Structural Biology: Challenges and Opportunities (Workshop Report)

By: A. Kovalevskyi, F. Meilleur*, D. Myles & H. O'Neill

topics (OpenAlex): Nuclear Physics and Applications
Source: ORCID
Added: July 25, 2025

2024 article

Unraveling the Molecular mechanism of Polysaccharide Lyases for Efficient Alginate Degradation

BioRxiv.

By: J. Rivas-Fernández, M. Vuillemin, B. Pilgaard, L. Klau, F. Fredslund, C. Lund-Hanssen, D. Welner, A. Meyer ...

Contributors: J. Rivas-Fernández, M. Vuillemin, B. Pilgaard, L. Klau, F. Fredslund, C. Lund-Hanssen, D. Welner, A. Meyer ...

topics (OpenAlex):
Source: ORCID
Added: June 3, 2025

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