Works (7)

Updated: July 5th, 2023 15:49

2016 journal article

Prediction of the structures of the plant-specific regions of vascular plant cellulose synthases and correlated functional analysis

Cellulose, 23(1), 145–161.

By: L. Sethaphong n, J. Davis n, E. Slabaugh n, A. Singh n, C. Haigler n  & Y. Yingling n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ

Contributors: Y. Yingling n , C. Haigler n , A. Singh n, E. Slabaugh n, J. Davis n & L. Sethaphong n

author keywords: Arabidopsis thaliana; Cellulose synthesis; Computational protein structure prediction; Isoform specificity; Mutant complementation
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2014 journal article

Computational and genetic evidence that different structural conformations of a non-catalytic region affect the function of plant cellulose synthase

Journal of Experimental Botany, 65(22), 6645–6653.

By: E. Slabaugh n, L. Sethaphong n, C. Xiao *, J. Amick n, C. Anderson *, C. Haigler n , Y. Yingling n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ

Contributors: Y. Yingling n , C. Haigler n , C. Anderson *, J. Amick n, C. Xiao *, L. Sethaphong n, E. Slabaugh n

author keywords: Cellulose biosynthesis; CESA; genetic complementation; protein structural modelling; rsw1 mutant; transmembrane helix
MeSH headings : Amino Acid Sequence; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Biocatalysis; Computational Biology; Glucosyltransferases / chemistry; Glucosyltransferases / genetics; Glucosyltransferases / metabolism; Molecular Sequence Data; Mutant Proteins / metabolism; Mutation; Phenotype; Protein Structure, Secondary; Recombinant Fusion Proteins / metabolism; Sequence Alignment; Structure-Activity Relationship
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2014 journal article

The relationship between enhanced enzyme activity and structural dynamics in ionic liquids: a combined computational and experimental study

PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 16(7), 2944–2953.

By: H. Kim n, S. Ha *, L. Sethaphong n, Y. Koo * & Y. Yingling n 

co-author countries: Korea (Republic of) πŸ‡°πŸ‡· United States of America πŸ‡ΊπŸ‡Έ

Contributors: H. Kim n, S. Ha *, L. Sethaphong n, Y. Koo * & Y. Yingling n 

MeSH headings : 1-Butanol / chemistry; Esterification; Fungal Proteins / chemistry; Fungal Proteins / metabolism; Ionic Liquids / chemistry; Lipase / chemistry; Lipase / metabolism; Molecular Dynamics Simulation; Protein Conformation; Solvents / chemistry; Vinyl Compounds / chemistry; Water / chemistry; tert-Butyl Alcohol / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

Tertiary model of a plant cellulose synthase

Proceedings of the National Academy of Sciences, 110(18), 7512–7517.

By: L. Sethaphong*, C. Haigler n , J. Kubicki *, J. Zimmer *, D. Bonetta *, S. DeBolt*, Y. Yingling* 

co-author countries: Australia πŸ‡¦πŸ‡Ί Canada πŸ‡¨πŸ‡¦ Japan πŸ‡―πŸ‡΅ United States of America πŸ‡ΊπŸ‡Έ

Contributors: Y. Yingling* , S. DeBolt*, D. Bonetta *, J. Zimmer *, J. Kubicki *, C. Haigler n , L. Sethaphong*

author keywords: rosette cellulose synthase complex; molecular modeling; protein structure prediction; GlycosylTransferase Family 2; beta-1,4-glucan polymerization
MeSH headings : Arabidopsis / enzymology; Bacteria / enzymology; Computational Biology; Cytosol / enzymology; Glucosyltransferases / chemistry; Glucosyltransferases / genetics; Gossypium / enzymology; Models, Molecular; Mutation / genetics; Phenotype; Protein Structure, Quaternary; Protein Structure, Secondary; Protein Structure, Tertiary
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2013 conference paper

X3DBio2: A visual analysis tool for biomolecular structure comparison

In P. C. Wong, D. L. Kao, M. C. Hao, C. Chen, & C. G. Healey (Eds.), Visualization and Data Analysis 2013 (Vol. 8654).

By: H. Yi *, S. Thakur*, L. Sethaphong n & Y. Yingling n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ

Ed(s): P. Wong, D. Kao, M. Hao, C. Chen & C. Healey

Event: IS&T/SPIE Electronic Imaging

author keywords: Molecular structure comparison; Molecular visualization; Interactive exploration; Protein and nucleic acids; Sequence alignment; Structure superposition; Quaternion map; Contact map; Ramachandran plot
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2011 journal article

Interactions of Cations with RNA Loop-Loop Complexes

BIOPHYSICAL JOURNAL, 101(3), 727–735.

By: A. Singh n, L. Sethaphong n & Y. Yingling n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ

Contributors: A. Singh n, L. Sethaphong n & Y. Yingling n 

MeSH headings : Base Pairing; Base Sequence; Cations / metabolism; Metals / metabolism; Molecular Dynamics Simulation; Nucleic Acid Conformation; RNA / chemistry; RNA / genetics; RNA / metabolism; Solvents / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 journal article

The Sequence of HIV-1 TAR RNA Helix Controls Cationic Distribution

JOURNAL OF PHYSICAL CHEMISTRY C, 114(12), 5506–5512.

By: L. Sethaphong n, A. Singh n, A. Marlowe n & Y. Yingling n 

co-author countries: United States of America πŸ‡ΊπŸ‡Έ

Contributors: Y. Yingling n , A. Marlowe n, A. Singh n & L. Sethaphong n

Sources: Web Of Science, ORCID
Added: August 6, 2018