Huaqin Pan

Works (7)

Updated: July 5th, 2023 15:57

2008 article

Transcriptome analysis reveals new insight into appressorium formation and function in the rice blast fungus Magnaporthe oryzae

Oh, Y., Donofrio, N., Pan, H., Coughlan, S., Brown, D. E., Meng, S., … Dean, R. A. (2008, May 20). Genome Biology, Vol. 9.

By: Y. Oh n, N. Donofrio n, H. Pan n, S. Coughlan*, D. Brown n, S. Meng n, T. Mitchell n, R. Dean n 

MeSH headings : Cell Wall / chemistry; Cell Wall / metabolism; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Profiling; Gene Expression Regulation, Fungal; Lipid Metabolism; Magnaporthe / cytology; Magnaporthe / genetics; Magnaporthe / physiology; Signal Transduction; Spores, Fungal / cytology; Spores, Fungal / genetics
topics (OpenAlex): Fungal and yeast genetics research; Plant-Microbe Interactions and Immunity; Microbial Natural Products and Biosynthesis
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2006 article

Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe grisea

Donofrio, N. M., Oh, Y., Lundy, R., Pan, H., Brown, D. E., Jeong, J. S., … Dean, R. A. (2006, June 1). Fungal Genetics and Biology, Vol. 43, pp. 605–617.

By: N. Donofrio n, Y. Oh  n, R. Lundy n, H. Pan n, D. Brown n, J. Jeong n, S. Coughlan*, T. Mitchell n, R. Dean n 

author keywords: nitrogen limitation; GATA transcription factors; metabolism; SPM1; protease; targeted gene disruption; pathogenicity
MeSH headings : Amino Acids / metabolism; Binding Sites; Biological Transport / genetics; DNA-Binding Proteins / genetics; GATA Transcription Factors / metabolism; Gene Expression; Gene Expression Regulation, Fungal; Genes, Fungal; Magnaporthe / genetics; Magnaporthe / pathogenicity; Nitrogen / metabolism; Oligonucleotide Array Sequence Analysis; Oryza / metabolism; Oryza / microbiology; Plant Diseases / microbiology; Promoter Regions, Genetic; Serine Endopeptidases / genetics
topics (OpenAlex): Fungal and yeast genetics research; Mycorrhizal Fungi and Plant Interactions; Plant-Microbe Interactions and Immunity
TL;DR: A genome-wide analysis of gene expression under nitrogen-limiting conditions in the rice blast pathogen Magnaporthe grisea resulted in targeted gene replacement on the vacuolar serine protease, SPM1, resulting in decreased sporulation and appressorial development as well as a greatly attenuated ability to cause disease. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2006 journal article

The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae

Genome Biology, 7(2).

By: M. Thon, H. Pan, S. Diener, J. Papalas, A. Taro, T. Mitchell, R. Dean 

Source: NC State University Libraries
Added: August 6, 2018

2005 journal article

Novel G-protein-coupled receptor-like proteins in the plant pathogenic fungus Magnaporthe grisea

Genome Biology, 6(3).

By: R. Kulkarni, M. Thon, H. Pan & R. Dean 

Source: NC State University Libraries
Added: August 6, 2018

2005 article

The genome sequence of the rice blast fungus Magnaporthe grisea

Dean, R. A., Talbot, N. J., Ebbole, D. J., Farman, M. L., Mitchell, T. K., Orbach, M. J., … Birren, B. W. (2005, April 1). Nature, Vol. 434, pp. 980–986.

By: R. Dean n , N. Talbot *, D. Ebbole *, M. Farman *, T. Mitchell n, M. Orbach *, M. Thon *, R. Kulkarni n ...

MeSH headings : Fungal Proteins / genetics; Fungal Proteins / metabolism; Genes, Fungal / genetics; Genome, Fungal; Guanosine Diphosphate / metabolism; Guanosine Triphosphate / metabolism; Magnaporthe / classification; Magnaporthe / genetics; Magnaporthe / metabolism; Magnaporthe / pathogenicity; Oryza / microbiology; Plant Diseases / microbiology; Point Mutation / genetics; Proteome / genetics; Proteome / metabolism; Receptors, G-Protein-Coupled / genetics; Repetitive Sequences, Nucleic Acid / genetics; Saccharomyces cerevisiae / metabolism; Signal Transduction; Virulence / genetics
topics (OpenAlex): Fungal and yeast genetics research; Plant-Microbe Interactions and Immunity; Microbial Natural Products and Biosynthesis
TL;DR: The draft sequence of the M. grisea genome is reported, reflecting the clonal nature of this fungus imposed by widespread rice cultivation and analysis of the gene set provides an insight into the adaptations required by a fungus to cause disease. (via Semantic Scholar)
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UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2005 article

The α- and β-subunits of the Human UDP-N-acetylglucosamine:Lysosomal Enzyme Phosphotransferase Are Encoded by a Single cDNA

Kudo, M., Bao, M., D'Souza, A., Ying, F., Pan, H., Roe, B. A., & Canfield, W. M. (2005, August 25). Journal of Biological Chemistry.

By: M. Kudo*, M. Bao*, A. D'Souza*, F. Ying *, H. Pan n, B. Roe*, W. Canfield*

MeSH headings : Amino Acid Motifs; Amino Acid Sequence; Animals; Antibodies, Monoclonal / chemistry; Aspartic Acid / chemistry; Blotting, Northern; Catalytic Domain; Cattle; Cell Line; Cloning, Molecular; DNA, Complementary / metabolism; Gene Expression Regulation, Enzymologic; Gene Library; Humans; Lysine / chemistry; Lysosomes / chemistry; Mice; Models, Genetic; Molecular Sequence Data; N-Acetylglucosaminyltransferases / chemistry; Oligonucleotides / chemistry; Peptides / chemistry; Plasmids / metabolism; Protein Conformation; Protein Structure, Tertiary; Recombinant Proteins / chemistry; Transfection; Transferases (Other Substituted Phosphate Groups) / genetics; Transferases (Other Substituted Phosphate Groups) / physiology
topics (OpenAlex): Glycosylation and Glycoproteins Research; Carbohydrate Chemistry and Synthesis; Lysosomal Storage Disorders Research
TL;DR: The completion of cloning all three subunits of GlcNAc-phosphotransferase allows expression of recombinant enzyme and dissection of lysosomal targeting disorders. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2004 article

Gene Discovery and Gene Expression in the Rice Blast Fungus, Magnaporthe grisea: Analysis of Expressed Sequence Tags

Ebbole, D. J., Jin, Y., Thon, M., Pan, H., Bhattarai, E., Thomas, T., & Dean, R. (2004, December 1). Molecular Plant-Microbe Interactions, Vol. 17, pp. 1337–1347.

By: D. Ebbole *, Y. Jin, M. Thon*, H. Pan*, E. Bhattarai, T. Thomas, R. Dean* 

author keywords: plant pathogen
MeSH headings : Expressed Sequence Tags; Gene Expression Profiling; Gene Library; Genome, Fungal; Magnaporthe / genetics; Multigene Family; Oryza / microbiology
topics (OpenAlex): Fungal and yeast genetics research; Microbial Metabolism and Applications; Chromium effects and bioremediation
TL;DR: Manual annotation of the most abundant cDNAs with no known homologs allowed us to identify a family of metallothionein proteins present in M. grisea, Neurospora crassa, and Fusarium graminearum. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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