Works Published in 2015

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Displaying works 101 - 120 of 339 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2015 journal article

Technoeconomic analysis of jet fuel production from hydrolysis, decarboxylation, and reforming of camelina oil

Biomass and Bioenergy, 75, 23–34.

By: R. Natelson n, W. Wang*, W. Roberts* & K. Zering n

author keywords: Camelina; Techno-economic model; Renewable jet fuel; Renewable diesel; Hydrotreating; Oil extraction
Sources: Crossref, NC State University Libraries
Added: February 12, 2020

2015 journal article

RNA interference tools for the western flower thrips, Frankliniella occidentalis

Journal of Insect Physiology, 76, 36–46.

By: I. Badillo-Vargas*, D. Rotenberg*, B. Schneweis* & A. Whitfield*

author keywords: Thrips; Tomato spotted wilt tospovirus; RNA interference; Plant-virus vector; Vacuolar ATP synthase
MeSH headings : Animals; Female; Fertility / genetics; Gene Expression Regulation, Enzymologic; Insect Control / methods; Insect Proteins / genetics; Insect Proteins / metabolism; Insect Vectors / virology; Microinjections; Protein Subunits / genetics; Protein Subunits / metabolism; RNA Interference; RNA, Double-Stranded / genetics; Thysanoptera / genetics; Thysanoptera / physiology; Vacuolar Proton-Translocating ATPases / genetics; Vacuolar Proton-Translocating ATPases / metabolism
TL;DR: The findings indicate that an RNAi-based strategy to study gene function in thrips is feasible, can result in quantifiable phenotypes, and provides a much-needed tool for investigating the molecular mechanisms of thrips-tospovirus interactions. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020

2015 journal article

Disruption of insect transmission of plant viruses

Current Opinion in Insect Science, 8, 79–87.

TL;DR: This review focuses on new technologies that aim to disrupt the virus-vector interaction and focuses on a few of the well-characterized virus- vector interactions in the field. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020

2015 journal article

Insect vector-mediated transmission of plant viruses

Virology, 479-480, 278–289.

By: A. Whitfield*, B. Falk* & D. Rotenberg*

author keywords: Capsid protein; Virus glycoprotein; Aphid; Whitefly; Thrips; Planthopper; Leafhopper; Hemipteran; Virus-vector interactions
MeSH headings : Animals; Host-Parasite Interactions; Insect Vectors / growth & development; Insect Vectors / virology; Plant Viruses / physiology; Plants / parasitology; Plants / virology
TL;DR: This review focuses on well-characterized insect vector-transmitted viruses in the following genera: Caulimovirus, Crinivirus, Luteovirus, Geminiviridae, Reov virus, Tospov Virus, and Tenuivirus. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020

2015 journal article

Thrips transmission of tospoviruses

Current Opinion in Virology, 15, 80–89.

By: D. Rotenberg*, A. Jacobson*, D. Schneweis* & A. Whitfield*

MeSH headings : Animals; Arthropod Vectors / virology; Biodiversity; Host-Pathogen Interactions / physiology; Insect Vectors / virology; Solanum lycopersicum / virology; Plant Diseases / virology; Thysanoptera / virology; Tospovirus / physiology
TL;DR: This review provides a special emphasis on TSWV and Frankliniella occidentalis, the model tospovirus-thrips pathosystem and other virus-vector combinations are also of importance and where possible, comparisons are made between different viruses and thrips vectors. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020

2015 journal article

Environmental Regulation and Enforcement: Structures, Processes and the Use of Data for Fraud Detection

Journal of Environmental Assessment Policy and Management, 17(4).

By: L. Rivers n, T. Dempsey*, J. Mitchell* & C. Gibbs*

Contributors: L. Rivers n, T. Dempsey*, J. Mitchell* & C. Gibbs*

UN Sustainable Development Goal Categories
16. Peace, Justice and Strong Institutions (OpenAlex)
Source: ORCID
Added: January 10, 2020

2015 journal article

Ethnic-specific associations of rare and low-frequency DNA sequence variants with asthma

Nature Communications, 6(1).

By: C. Igartua*, R. Myers*, R. Mathias*, M. Pino-Yanes*, C. Eng*, P. Graves*, A. Levin*, B. Del-Rio-Navarro* ...

MeSH headings : Asthma / genetics; Carrier Proteins / genetics; Female; Genetic Predisposition to Disease / genetics; Genome-Wide Association Study / methods; Humans; Linkage Disequilibrium / genetics; Male; Membrane Proteins / genetics; Neoplasm Proteins / genetics
TL;DR: The results suggest that associations with rare and low-frequency variants are ethnic specific and not likely to explain a significant proportion of the ‘missing heritability’ of asthma. (via Semantic Scholar)
Source: Crossref
Added: January 5, 2020

2015 journal article

Associations of Ozone and PM2.5 Concentrations With Parkinsonʼs Disease Among Participants in the Agricultural Health Study

Journal of Occupational and Environmental Medicine, 57(5), 509–517.

By: E. Kirrane n, C. Bowman n, J. Davis n, J. Hoppin n, A. Blair n, H. Chen n, M. Patel n, D. Sandler n ...

MeSH headings : Adolescent; Adult; Aged; Aged, 80 and over; Agriculture; Air Pollutants, Occupational / adverse effects; Air Pollutants, Occupational / analysis; Air Pollution / adverse effects; Air Pollution / analysis; Child; Farmers; Female; Follow-Up Studies; Humans; Iowa; Logistic Models; Male; Middle Aged; North Carolina; Occupational Diseases / etiology; Occupational Exposure / adverse effects; Occupational Exposure / analysis; Ozone / adverse effects; Ozone / analysis; Parkinson Disease / etiology; Particulate Matter / adverse effects; Particulate Matter / analysis; Young Adult
TL;DR: The plausibility of an effect of ambient concentrations of these pollutants on Parkinson's disease risk is supported by experimental data demonstrating damage to dopaminergic neurons at relevant concentrations. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: January 5, 2020

2015 journal article

IARC Monographs: 40 Years of Evaluating Carcinogenic Hazards to Humans

Environmental Health Perspectives, 123(6), 507–514.

By: N. Pearce*, A. Blair*, P. Vineis*, W. Ahrens*, A. Andersen*, J. Anto*, B. Armstrong*, A. Baccarelli* ...

MeSH headings : Biomedical Research; Carcinogens, Environmental; Humans; International Agencies / organization & administration; Neoplasms; Public Health; Publications
TL;DR: Criticism of the IARC classification process are unconvincing, the procedures employed by IARC to assemble Working Groups of scientists from the various disciplines and the techniques followed to review the literature and perform hazard assessment of various agents provide a balanced evaluation and an appropriate indication of the weight of the evidence. (via Semantic Scholar)
Source: Crossref
Added: January 5, 2020

2015 journal article

An updated evolutionary classification of CRISPR–Cas systems

Nature Reviews Microbiology, 13(11), 722–736.

MeSH headings : Archaea / genetics; Bacteria / genetics; CRISPR-Cas Systems / genetics; Evolution, Molecular; Genome, Archaeal; Genome, Bacterial; Phylogeny
TL;DR: An approach combining the analysis of signature protein families and features of the architecture of cas loci that unambiguously partitions most CRISPR–cas loci into distinct classes, types and subtypes is presented. (via Semantic Scholar)
Sources: ORCID, Crossref, NC State University Libraries
Added: January 2, 2020

2015 journal article

Conserved S-Layer-Associated Proteins Revealed by Exoproteomic Survey of S-Layer-Forming Lactobacilli

Applied and Environmental Microbiology, 82(1), 134–145.

By: B. Johnson n, J. Hymes n, R. Sanozky-Dawes n, E. Henriksen n, R. Barrangou n & T. Klaenhammer n

Ed(s): H. Nojiri

MeSH headings : Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Lactobacillus / chemistry; Lactobacillus / classification; Lactobacillus / genetics; Lactobacillus / metabolism; Lactobacillus acidophilus / chemistry; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / metabolism; Membrane Glycoproteins / chemistry; Membrane Glycoproteins / genetics; Membrane Glycoproteins / metabolism; Molecular Sequence Data; Phylogeny; Proteomics
TL;DR: Proteomic complexity and differences in the cell surface properties between S-layer- and non-S- layer-forming lactobacilli reveal the potential for SLAPs to mediate intimate probiotic interactions and signaling with the host intestinal mucosa. (via Semantic Scholar)
Source: ORCID
Added: January 2, 2020

2015 journal article

Metagenomic reconstructions of bacterial CRISPR loci constrain population histories

The ISME Journal, 10(4), 858–870.

MeSH headings : Bacteria / classification; Bacteria / genetics; Bacteria / virology; Bacteriophages / genetics; CRISPR-Cas Systems; Clustered Regularly Interspaced Short Palindromic Repeats; Metagenomics; Plasmids
TL;DR: Metagenomics is used to study the stability and dynamics of the type I-E CRISPR-Cas locus of Leptospirillum group II bacteria in biofilms sampled over 5 years from an acid mine drainage (AMD) system and suggest long-term coexistence of Leptonospirillo group II with AMDV1 and periods whenAMDV1 was less dominant. (via Semantic Scholar)
Sources: ORCID, NC State University Libraries
Added: January 2, 2020

2015 journal article

CRISPR-Based Technologies and the Future of Food Science

Journal of Food Science, 80(11), R2367–R2372.

author keywords: CRISPR; genome; microbiology
MeSH headings : Bacteria / genetics; Bacteria / virology; Bacteriophages; CRISPR-Cas Systems; Clustered Regularly Interspaced Short Palindromic Repeats; Fermentation; Food Technology; Humans; Probiotics
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: ORCID
Added: January 2, 2020

2015 journal article

Diversity of CRISPR-Cas immune systems and molecular machines

Genome Biology, 16(1).

By: R. Barrangou n

MeSH headings : Adaptive Immunity / genetics; Animals; Bacteria / genetics; Bacteria / immunology; CRISPR-Cas Systems / genetics; CRISPR-Cas Systems / immunology; DNA / genetics; Genetic Engineering / methods; Genetic Variation / genetics; Genetic Variation / immunology; Humans; RNA Editing / genetics
TL;DR: A plethora of CRISPR molecular machines occur broadly in prokaryotic genomes, with a diversity of Cas nucleases that can be repurposed for various applications. (via Semantic Scholar)
Source: ORCID
Added: January 2, 2020

2015 conference paper

Population structure of the obligate biotroph Peronospora tabacina, the cause of blue mold of tobacco

PHYTOPATHOLOGY, 105(11), 55–55.

By: D. Hadziabdic, P. Wadl, F. Runge, J. Ristaino, O. Spring & R. Trigiano

Event: AMER PHYTOPATHOLOGICAL SOC 3340 PILOT KNOB ROAD, ST PAUL, MN 55121 USA

Source: ORCID
Added: December 20, 2019

2015 journal article

The Top 10 oomycete pathogens in molecular plant pathology

Molecular Plant Pathology, 16(4), 413–434.

By: S. Kamoun, O. Furzer, J. Jones, H. Judelson, G. Ali, R. Dalio, S. Roy, L. Schena ...

Source: ORCID
Added: December 20, 2019

2015 conference paper

Molecular characterization and genetic diversity of Mycospharella fijiensis, in Costa Rica using sequence based nuclear markers

PHYTOPATHOLOGY, 105(11), 27–27.

By: S. Chavan, M. Wyatt, L. Alpizar, M. Munoz & J. Ristaino

Event: AMER PHYTOPATHOLOGICAL SOC 3340 PILOT KNOB ROAD, ST PAUL, MN 55121 USA

Source: ORCID
Added: December 20, 2019

2015 journal article

Influence of organic waste amendments on selected soil physical and chemical properties.

Journal of Agronomy, 14(4), 1–11.

By: E. Kabil, M. Faize, K. Makroum, O. Assobhei, M. Rafrafi, M. Loizidou, A. Aajjane, M. Abdel-Fattah ...

Source: ORCID
Added: December 20, 2019

2015 conference paper

Evolutionary origins of US and famine-era lineages of Phytophthora infestans

PHYTOPATHOLOGY, 105(11), 118–119.

By: J. Ristaino, A. Saville, M. Martin & M. Gilbert

Event: AMER PHYTOPATHOLOGICAL SOC 3340 PILOT KNOB ROAD, ST PAUL, MN 55121 USA

Source: ORCID
Added: December 20, 2019

2015 journal article

Genomic Characterization of a South American Phytophthora Hybrid Mandates Reassessment of the Geographic Origins of Phytophthora infestans

Molecular Biology and Evolution, 33(2), 478–491.

author keywords: Phytophthora infestans; Phytophthora andina; plant disease; population genomics; phylogenomics; pathogen
MeSH headings : Evolution, Molecular; Gene Flow; Genome; Genome, Mitochondrial; Genomics / methods; Genotype; Haplotypes; Hybridization, Genetic; Linkage Disequilibrium; Phylogeny; Phytophthora infestans / classification; Phytophthora infestans / genetics; Plant Diseases; Reproduction / genetics; South America
TL;DR: It is shown that basal branches of the clade comprising Mexican samples are occupied by clonal isolates collected from wild Solanum hosts, suggesting that modern Mexican P. infestans diversified on Solanums tuberosum after a host jump from a wild species and that the origins of P.infestans are more complex than was previously thought. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Crossref, ORCID
Added: December 20, 2019

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