Works Published in 2015
Displaying works 1 - 20 of 79 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2015 journal article
Life cycle-optimization framework for photosynthetic biorefineries
Abstracts of Papers of the American Chemical Society. https://publons.com/wos-op/publon/7119295/
Contributors: R. Manavi, A. Karam, C. McMillan, J. Levis, F. De Los Reyes , J. Ducoste, R. Ranjithan
Source: ORCID
Added: January 26, 2024
2015 journal article
Coupling fluid dynamics with kinetic modeling to quantify the effects of photosynthetic bioreactor design and operation on yield performance
Abstracts of Papers of the American Chemical Society. https://publons.com/wos-op/publon/7119297/
Contributors: R. Manavi, S. Yamamoto, J. Levis, J. Ducoste, F. De Los Reyes & R. Ranjithan
Source: ORCID
Added: January 26, 2024
2015 journal article
Evaluation of boxwood cultivars for resistance to boxwood blight
Plant Disease Management Reports, 10, OT009.
Source: NC State University Libraries
Added: April 10, 2021
2015 report
The Use of Management Practices to Reduce Mycotoxin Contamination in Corn
(NC State Extension Publication No. AG-807). Raleigh, NC: North Carolina Cooperative Extension Service.
Source: NC State University Libraries
Added: January 17, 2021
2015 journal article
Prokaryotic Community Analysis of a Hyperalkaline Spring in the Philippines Using 16S rRNA Gene Clone Library Construction
Philippine Journal of Science, 144(1), 7–18.
Source: NC State University Libraries
Added: January 14, 2021
2015 journal article
Sequence data for Clostridium autoethanogenum using three generations of sequencing technologies
Scientific Data, 2(1).
MeSH headings : Algorithms; Clostridium / genetics; Genome, Bacterial; Genomics; Sequence Analysis, DNA / methods
TL;DR:
High quality sequence datasets which span three generations of sequencing technologies, containing six types of data from four NGS platforms and originating from a single microorganism, Clostridium autoethanogenum are described.
(via Semantic Scholar)
www.nature.com (publisher PDF)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Sources: Crossref, NC State University Libraries
Added: September 4, 2020
2015 journal article
Modeling infectious disease dynamics in the complex landscape of global health
Science, 347(6227), aaa4339.
MeSH headings : Animals; Basic Reproduction Number; Coinfection; Communicable Disease Control; Communicable Diseases / epidemiology; Communicable Diseases / transmission; Communicable Diseases, Emerging / epidemiology; Communicable Diseases, Emerging / transmission; Disease Outbreaks; Global Health; Health Policy; Hemorrhagic Fever, Ebola / epidemiology; Humans; Models, Biological; Public Health; Zoonoses / epidemiology; Zoonoses / transmission
TL;DR:
The development of mathematical models used in epidemiology are reviewed and how these can be harnessed to develop successful control strategies and inform public health policy, using the West African Ebola epidemic as an example.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Source: ORCID
Added: April 8, 2020
2015 journal article
Genetic structure and post-glacial expansion ofCornus floridaL. (Cornaceae): integrative evidence from phylogeography, population demographic history, and species distribution modeling
Journal of Systematics and Evolution, 54(2), 136–151.
author keywords: Bayesian skyride plot; Cornus florida; LGM; phylogeography; plastid DNA; post-glacial range expansion; species distribution modeling
TL;DR:
This study demonstrates the benefit of integrating genetic data and species distribution modeling to obtain corroborative evidence in elucidating recent biogeographic history and understanding of genetic patterns and species evolution.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Sources: Crossref, NC State University Libraries
Added: January 28, 2020
2015 article
The GEOTRACES Intermediate Data Product 2014
author keywords: GEOTRACES; Trace elements; Isotopes; Electronic atlas
Source: ORCID
Added: January 8, 2020
2015 journal article
Interpretation of complexometric titration data: An intercomparison of methods for estimating models of trace metal complexation by natural organic ligands
author keywords: Metal ions; Organic ligands; Speciation; Complexation; Equilibrium constant; Titration; Voltammetry; Multi-window titration; Data analysis
Source: ORCID
Added: January 8, 2020
2015 journal article
Bioavailability and Electroreactivity of Zinc Complexed to Strong and Weak Organic Ligands
Environmental Science and Technology, 49(18), 10894–10902.
MeSH headings : Biological Availability; Diatoms / metabolism; Edetic Acid / chemistry; Electrochemical Techniques / instrumentation; Electrochemical Techniques / methods; Electrodes; Histidine / chemistry; Ligands; Mercury; Organometallic Compounds / chemistry; Phytoplankton / metabolism; Seawater; Water Pollutants, Chemical / chemistry; Water Pollutants, Chemical / pharmacokinetics; Zinc / chemistry; Zinc / pharmacokinetics
TL;DR:
Using the model organic ligands, EDTA and histidine, quantitative correspondence is shown between the bioavailability of Zn to the diatom Thalassiosira weissflogii, and its reduction at -1.2 V on a hanging mercury drop electrode.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: January 8, 2020
2015 journal article
The Siderophore Metabolome of Azotobacter vinelandii
Applied and Environmental Microbiology, 82(1), 27–39.
Ed(s): M. Kivisaar
MeSH headings : Azotobacter vinelandii / chemistry; Azotobacter vinelandii / genetics; Azotobacter vinelandii / metabolism; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Biosynthetic Pathways; Chromatography, Liquid; Mass Spectrometry; Metabolome; Siderophores / biosynthesis; Siderophores / chemistry
TL;DR:
A detailed characterization of the siderophore metabolome of the agriculturally important and widely studied model organism Azotobacter vinelandii revealed over 35 metal-binding secondary metabolites, indicative of a vast chelome in A. v inelandii, and suggested new roles for vibrioferrin in the soil environment.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: January 8, 2020
2015 journal article
Dissolved cobalt speciation and reactivity in the eastern tropical North Atlantic
Marine Chemistry, 173, 310–319.
author keywords: Marine cobalt cycle; Cobalt reducibility; Seawater cobalt complexes; Cobalt distribution; Trace metal speciation; Kinetics; Thermodynamics; Reactivity; Marine cobalt redox chemistry
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: January 8, 2020
2015 journal article
Short-Term Precipitation Exclusion Alters Microbial Responses to Soil Moisture in a Wet Tropical Forest
Microbial Ecology.
MeSH headings : Biota; Costa Rica; Rain; Rainforest; Soil / chemistry; Soil Microbiology
TL;DR:
Functional patterns suggest that changes in microbial physiology may drive positive feedbacks to rising atmospheric CO2 concentrations if wet tropical forests experience longer or more intense dry seasons in the future.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2015 journal article
Resilience vs. historical contingency in microbial responses to environmental change
Ecology Letters.
author keywords: Acclimation; acclimatisation; adaptation; climate change; competition; dormancy; ecosystem function; legacy; microbial community; plasticity
MeSH headings : Biological Evolution; Climate Change; Ecology / methods; Ecosystem; Models, Theoretical; Soil / chemistry; Soil Microbiology
TL;DR:
By modelling microbial population responses to environmental change, it is demonstrated that historical environments can constrain soil function with the degree of constraint depending on the magnitude of change in the context of the prior environment.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2015 journal article
Microbial-mediated redistribution of ecosystem nitrogen cycling can delay progressive nitrogen limitation
Biogeochemistry.
author keywords: Nitrogen; Microbes; Mycorrhizal fungi; Progressive nitrogen limitation; Ecosystems
TL;DR:
It is suggested that microbe-mediated changes in N partitioning can delay PNL and may thereby act as a mechanism to extend the duration of the land carbon sink in response to rising atmospheric CO2.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2015 journal article
Epidemiology and population biology of Pseudoperonospora cubensis: a model system for management of downy mildews.
Annual Review of Phytopathology.
author keywords: Bayesian prediction; disease management; genomics; mating type; pathotype; risk assessment
MeSH headings : Crop Production; Cucurbitaceae / microbiology; Oomycetes / physiology; Plant Diseases / microbiology
TL;DR:
Uncertainty remains regarding the role of locally produced inoculum in disease outbreaks, but evidence suggests multiple sources of primary inoculum could be important and concepts and approaches developed in this pathosystem can guide future efforts when responding to incursions of new or reemerging downy mildew pathogens.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Source: ORCID
Added: December 19, 2019
2015 journal article
Redox rhythm reinforces the circadian clock to gate immune response
Nature, 523(7561), 472–476.
Contributors: M. Zhou *, W. Wang *, S. Karapetyan *, M. Mwimba*, J. Marqués*, N. Buchler* , X. Dong *
MeSH headings : Arabidopsis / growth & development; Arabidopsis / immunology; Arabidopsis / metabolism; Arabidopsis / microbiology; Arabidopsis Proteins / biosynthesis; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Nucleus / metabolism; Circadian Clocks / drug effects; Circadian Clocks / genetics; Circadian Clocks / physiology; Circadian Rhythm / genetics; Circadian Rhythm / immunology; Circadian Rhythm / physiology; Darkness; Gene Expression Regulation, Plant / drug effects; Gene Expression Regulation, Plant / genetics; Genes, Plant / genetics; Oxidation-Reduction / drug effects; Plant Diseases / microbiology; Plant Immunity / genetics; Plant Immunity / immunology; Pseudomonas syringae / physiology; Salicylic Acid / immunology; Salicylic Acid / metabolism; Salicylic Acid / pharmacology; Transcription Factors / biosynthesis; Transcription Factors / genetics; Transcription, Genetic / genetics
TL;DR:
It is reported that the master immune regulator NPR1 (non-expressor of pathogenesis-related gene 1) of Arabidopsis is a sensor of the plant’s redox state and regulates transcription of core circadian clock genes even in the absence of pathogen challenge.
(via Semantic Scholar)
Source: ORCID
Added: February 11, 2019
2015 journal article
Different mechanisms confer gradual control and memory at nutrient- and stress-regulated genes in yeast
Molecular and Cellular Biology, 35(21), 3669–3683.
Contributors: A. Rienzo*, D. Poveda-Huertes*, S. Aydin *, N. Buchler* , A. Pascual-Ahuir * & M. Proft *
MeSH headings : Galactokinase / genetics; Galactokinase / metabolism; Galactose / metabolism; Gene Expression Regulation, Fungal; Genes, Regulator; Histones / genetics; Histones / metabolism; Mitogen-Activated Protein Kinases / metabolism; Oxidoreductases / genetics; Oxidoreductases / metabolism; RNA Polymerase II / metabolism; Saccharomyces cerevisiae / cytology; Saccharomyces cerevisiae / genetics; Saccharomyces cerevisiae / metabolism; Saccharomyces cerevisiae Proteins / genetics; Saccharomyces cerevisiae Proteins / metabolism; Stress, Physiological; Trans-Activators / metabolism; Transcription Factors / metabolism
TL;DR:
Investigating the dose-dependent modulation of gene expression at high temporal resolution in response to nutrient and stress signals in yeast reveals important differences in the way dynamic signals create dose-sensitive gene expression outputs.
(via Semantic Scholar)
Source: ORCID
Added: February 11, 2019
2015 journal article
The Physarum polycephalum Genome Reveals Extensive Use of Prokaryotic Two-Component and Metazoan-Type Tyrosine Kinase Signaling.
Genome Biology and Evolution, 8(1), 109–125,
author keywords: Amoebozoa; tyrosine kinase receptor; two-component system; signaling; phytochrome
MeSH headings : Cell Cycle Proteins / genetics; Cell Cycle Proteins / metabolism; Evolution, Molecular; Genetic Loci; Genome, Protozoan; Physarum polycephalum / genetics; Protozoan Proteins / genetics; Protozoan Proteins / metabolism; Receptor Protein-Tyrosine Kinases / genetics; Receptor Protein-Tyrosine Kinases / metabolism; Signal Transduction; Transcriptome
TL;DR:
The analysis characterizes P. polycephalum as a prototypical eukaryote with features attributed to the last common ancestor of Amorphea, that is, the Amoebozoa and Opisthokonts, and argues against the later emergence of tyrosine kinase signaling in the opistHokont lineage.
(via Semantic Scholar)
Source: ORCID
Added: February 11, 2019
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