Works Published in 2009
Displaying works 81 - 100 of 272 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2009 journal article
Guest Editors' Introduction: New Technological Spaces
Technical Communication Quarterly, 18(3), 211–223.
Contributors: J. Swarts n & L. Kim*
UN Sustainable Development Goal Categories
4. Quality Education
(Web of Science)
11. Sustainable Cities and Communities
(OpenAlex)
Sources: Crossref, ORCID, NC State University Libraries
Added: February 24, 2020
2009 journal article
Understanding the neurogenetics of sleep: progress from Drosophila
Trends in Genetics, 25(6), 262–269.
MeSH headings : Animals; Drosophila / genetics; Drosophila / metabolism; Sleep / genetics; Sleep / physiology
TL;DR:
Drosophila melanogaster exhibits all the behavioral characteristics of mammalian sleep, enabling the use of powerful genetic approaches to dissect conserved fundamental neurogenetic aspects of sleep.
(via Semantic Scholar)
europepmc.org (repository)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Crossref
Added: February 24, 2020
2009 journal article
The Red Flour Beetle, Tribolium castaneum (Coleoptera): A Model for Studies of Development and Pest Biology
Cold Spring Harbor Protocols, 2009(8), pdb.emo126-pdb.emo126.
MeSH headings : Animals; Animals, Genetically Modified; Body Patterning / genetics; Body Patterning / physiology; Drug Resistance; Female; Genomics / methods; Larva / drug effects; Larva / genetics; Larva / growth & development; Male; Models, Biological; Pest Control; Pesticides / toxicity; RNA Interference; Tribolium / genetics; Tribolium / growth & development
TL;DR:
Cold Spring Harb Protoc Lorenzen, Gregor Bucher, Ernst A. Wimmer and Martin Klingler Studies of Development and Pest Biology (Coleoptera): A Model for Tribolium castaneum The Red Flour Beetle.
(via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 25, 2020
2009 journal article
Tribolium castaneum Larval Gut Transcriptome and Proteome: A Resource for the Study of the Coleopteran Gut
Journal of Proteome Research, 8(8), 3889–3898.
author keywords: Tribolium castaneum; microarray; proteomics; Coleoptera; insect control; insect gut
MeSH headings : Analysis of Variance; Animals; Digestive System / chemistry; Digestive System / metabolism; Electrophoresis, Gel, Two-Dimensional; Gene Expression Profiling / methods; Insect Control; Insect Proteins / analysis; Insect Proteins / genetics; Insect Proteins / metabolism; Larva / chemistry; Models, Biological; Oligonucleotide Array Sequence Analysis; Peptide Fragments / analysis; Proteome / analysis; Proteome / genetics; Proteome / metabolism; Proteomics / methods; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Tribolium / chemistry; Tribolium / genetics; Tribolium / metabolism
TL;DR:
The recently acquired T. castaneum genome is used to identify T.Castaneum genes and proteins in one of the more critical environmental interfaces of the insect, the larval alimentary tract, and provides the basis for comparative transcriptomic and proteomic studies related to the gut of coleopteran insects.
(via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 25, 2020
2009 journal article
Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
BMC Biology, 7(1), 73.
MeSH headings : Animals; Chromosome Mapping; Crosses, Genetic; DNA Transposable Elements / genetics; Embryo Loss / genetics; Embryo, Nonmammalian; Enhancer Elements, Genetic; Genes, Lethal; Genetic Markers; Germ-Line Mutation; Mutagenesis, Insertional / methods; Transposases; Tribolium / genetics
TL;DR:
A large-scale transposon mutagenesis screen for red flour beetle lines produced more than 6,500 new piggyBac insertions, which proved to be recessive lethal, semi-lethal, and eight indicated recessive sterility, while 505 showed new enhancer-trap patterns.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Sources: Crossref, NC State University Libraries
Added: January 25, 2020
2009 journal article
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum
Nucleic Acids Research, 38(suppl_1), D437–D442.
MeSH headings : Animals; Computational Biology / methods; Computational Biology / trends; Databases, Genetic; Databases, Nucleic Acid; Databases, Protein; Expressed Sequence Tags; Genome; Genomics; Information Storage and Retrieval / methods; Internet; Models, Genetic; Protein Structure, Tertiary; Software; Tribolium / genetics
TL;DR:
BeetleBase has been updated to provide more comprehensive genomic information for the red flour beetle Tribolium castaneum, and the BLAST and BLAT search tools have been integrated with the GMOD tools.
(via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 25, 2020
2009 journal article
Variation in Tomato spotted wilt virus Titer in Frankliniella occidentalis and Its Association with Frequency of Transmission
Phytopathology, 99(4), 404–410.
author keywords: Bunyaviridae; Thysanoptera; virus-vector interactions
MeSH headings : Animals; Datura / virology; Female; Host-Pathogen Interactions; Insecta / virology; Male; Plant Diseases / virology; RNA, Viral / analysis; Sex Factors; Tospovirus / isolation & purification; Tospovirus / physiology
TL;DR:
The hypothesis that a viruliferous thrips is more likely to transmit multiple times if it harbors a high titer of virus is supported and new insights are provided into the biological parameters that may influence the spread of TSWV by thrips.
(via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020
2009 journal article
Sexual Conflict Resolved by Invasion of a Novel Sex Determiner in Lake Malawi Cichlid Fishes
Science, 326(5955), 998–1001.
MeSH headings : Africa, Eastern; Animals; Biological Evolution; Chromosome Mapping; Cichlids / genetics; Cichlids / physiology; Female; Fresh Water; Gene Expression Regulation; Genetic Fitness; Genetic Speciation; Haplotypes; Linkage Disequilibrium; Male; Mating Preference, Animal; Melanophores / cytology; Melanophores / metabolism; Microsatellite Repeats; Molecular Sequence Data; PAX7 Transcription Factor / genetics; Phenotype; Pigmentation / genetics; Polymorphism, Single Nucleotide; Selection, Genetic; Sex Characteristics; Sex Determination Processes; Sexual Behavior, Animal
TL;DR:
The genetic basis for the orange-blotch color pattern, a trait under sexually antagonistic selection in the cichlid fish of Lake Malawi, East Africa, is identified and suggested that the resulting sexual conflict over the OB allele has been resolved by selection for a novel female sex determination locus that has invaded populations with an ancestral male sex determination system.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Sources: Crossref, NC State University Libraries
Added: January 5, 2020
2009 journal article
Invasive leaf resources alleviate density dependence in the invasive mosquito, Aedes albopictus
Biological Invasions, 12(7), 2319–2328.
author keywords: Vector; Florida; Live oak; Brazilian pepper; Australian pine; Asian tiger mosquito
TL;DR:
It is suggested that invasive leaf species can alleviate density dependent reductions in population performance in A. albopictus, and may contribute to its invasion success and potential to spread infectious disease.
(via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 4, 2020
2009 journal article
Leaf species identity and combination affect performance and oviposition choice of two container mosquito species
Ecological Entomology, 34(4), 447–456.
author keywords: Additivity model; Aedes albopictus; Aedes triseriatus; container habitats; Florida; invasive species; optimal oviposition theory
TL;DR:
Resource diversity can be an important determinant of individual and population performance in insects, and fallen parts of plants form the nutritive base for many aquatic systems, including mosquito habitats, but the effect of plant diversity on mosquito production is poorly understood.
(via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 4, 2020
2009 journal article
Strain-Specific Genotyping of Bifidobacterium animalis subsp. lactis by Using Single-Nucleotide Polymorphisms, Insertions, and Deletions
Applied and Environmental Microbiology, 75(23), 7501–7508.
MeSH headings : Animals; Bacterial Proteins / genetics; Bacterial Typing Techniques / methods; Bifidobacterium / classification; Bifidobacterium / genetics; Cluster Analysis; Culture Media / chemistry; DNA Fingerprinting / methods; Genotype; Glucose / metabolism; Membrane Transport Proteins / genetics; Mutagenesis, Insertional; Point Mutation; Polymorphism, Genetic; Sequence Analysis, DNA; Sequence Deletion
TL;DR:
The presence of a nonsynonymous SNP within the gene encoding a putative glucose uptake protein was found to correlate with the ability of certain strains to transport glucose and to grow rapidly in a medium containing glucose as the sole carbon source.
(via Semantic Scholar)
Source: ORCID
Added: January 2, 2020
2009 journal article
Comparison of the Complete Genome Sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04
Journal of Bacteriology, 191(13), 4144–4151.
MeSH headings : Bifidobacterium / genetics; Genome, Bacterial / genetics; Molecular Sequence Data; Polymorphism, Single Nucleotide / genetics; Sequence Analysis, DNA / methods
TL;DR:
The high degree of genome conservation observed between the two strains in terms of size, organization, and sequence is indicative of a genomically monomorphic subspecies and explains the inability to differentiate the strains by standard techniques such as pulsed-field gel electrophoresis.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Source: ORCID
Added: January 2, 2020
2009 journal article
Comparative Analyses of Prophage-Like Elements Present in Bifidobacterial Genomes
Applied and Environmental Microbiology, 75(21), 6929–6936.
MeSH headings : Bifidobacterium / genetics; Bifidobacterium / virology; Computational Biology; DNA, Bacterial / genetics; Gene Expression Profiling; Gene Order; Genome, Bacterial; Phylogeny; Prophages / genetics; Sequence Homology
TL;DR:
The genetic organization, phylogenetic relationships, and, in some cases, transcription profiles and inducibility of 19 prophage-like elements present on the individual chromosomes of nine bifidobacterial strains, which represent six different species are investigated.
(via Semantic Scholar)
Source: ORCID
Added: January 2, 2020
2009 journal article
The CRISPR System Protects Microbes against Phages, Plasmids
Microbe Magazine, 4(5), 224–230.
TL;DR:
Although phages outnumber their bacterial prey 10-fold, bacteria persist, sometimes relying on clustered regularly interspaced short palindromic repeats (CRISPRs) of DNA sequence as a defense mechanism.
(via Semantic Scholar)
Source: ORCID
Added: January 2, 2020
2009 journal article
Comparative analysis of CRISPR loci in lactic acid bacteria genomes
International Journal of Food Microbiology, 131(1), 62–70.
author keywords: Clustered regularly interspaced short palindromic repeats (CRISPR); Lactic acid bacteria; Cas gene; Phage; Horizontal gene transfer
TL;DR:
It is hypothesized that CRISPR loci have been subjected to horizontal gene transfer and further evolved independently in select lineages, in part due to selective pressure resulting from phage predation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Source: ORCID
Added: January 2, 2020
2009 conference paper
Genetic structure of Phytophthora infestans populations in China indicates multiple migration events
PHYTOPATHOLOGY, 99(6), S48–S48.
Event: AMER PHYTOPATHOLOGICAL SOC 3340 PILOT KNOB ROAD, ST PAUL, MN 55121 USA
Source: ORCID
Added: December 20, 2019
2009 journal article
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
Nature, 461(7262), 393.
Source: ORCID
Added: December 20, 2019
2009 journal article
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
Nature, 461(7262), 393–398.
Contributors: B. Haas *, S. Kamoun *, M. Zody *, R. Jiang *, R. Handsaker *, L. Cano *, M. Grabherr *, C. Kodira*
MeSH headings : Algal Proteins / genetics; DNA Transposable Elements / genetics; DNA, Intergenic / genetics; Evolution, Molecular; Genome / genetics; Host-Pathogen Interactions / genetics; Humans; Ireland; Molecular Sequence Data; Necrosis; Phenotype; Phytophthora infestans / genetics; Phytophthora infestans / pathogenicity; Plant Diseases / immunology; Plant Diseases / microbiology; Solanum tuberosum / immunology; Solanum tuberosum / microbiology; Starvation
TL;DR:
The sequence of the P. infestans genome is reported, which at ∼240 megabases (Mb) is by far the largest and most complex genome sequenced so far in the chromalveolates and probably plays a crucial part in the rapid adaptability of the pathogen to host plants and underpins its evolutionary potential.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science; OpenAlex)
13. Climate Action
(Web of Science)
Source: ORCID
Added: December 19, 2019
2009 book
DNA sequence analysis of the late-blight pathogen gives clues to the world-wide migration
In Acta Horticulturae (Vol. 834, pp. 27–40). http://www.scopus.com/inward/record.url?eid=2-s2.0-75949086408&partnerID=MN8TOARS
Contributors: J. Ristaino & C. Hu
Source: ORCID
Added: December 19, 2019
2009 journal article
A combinatorial interplay among the 1-aminocyclopropane-1-carboxylate isoforms regulates ethylene biosynthesis in Arabidopsis thaliana
Genetics, 183(3), 979–1003.
Contributors: A. Tsuchisaka*, G. Yu*, H. Jin *, J. Alonso *, J. Ecker *, X. Zhang *, S. Gao *, A. Theologis*
MeSH headings : Amino Acids, Cyclic / metabolism; Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Epistasis, Genetic; Ethylenes / biosynthesis; Flowers / genetics; Flowers / growth & development; Flowers / metabolism; Gene Expression Profiling; Gene Expression Regulation, Developmental; Gene Expression Regulation, Enzymologic; Gene Expression Regulation, Plant; Genetic Complementation Test; Genome, Plant / genetics; Isoenzymes / genetics; Isoenzymes / metabolism; Lyases / genetics; Lyases / metabolism; Mutation; Plant Diseases / genetics; Plant Diseases / microbiology; Plants, Genetically Modified; Reverse Transcriptase Polymerase Chain Reaction; S-Adenosylmethionine / metabolism; Time Factors
TL;DR:
The lethality of the null ACS mutant contrasts with the viability of null mutations in key components of the ethylene signaling apparatus, strongly supporting the view that ACC, the precursor of ethylene, is a primary regulator of plant growth and development.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
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