Works Published in 2016

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Displaying works 101 - 120 of 221 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2016 chapter

Immunohistochemistry

In Tumors in Domestic Animals (pp. 44–87).

By: J. Ramos-Vara* & L. Borst n

Sources: Crossref, NC State University Libraries
Added: August 28, 2019

2016 journal article

A Comprehensive Wellness Program for Veterinary Medical Education: Design and Implementation at North Carolina State University

International Journal of Higher Education, 6(1), 74.

By: K. Royal n, K. Flammer, L. Borst*, J. Huckle, H. Barter & J. Neel

TL;DR: This case study paper describes the development and implementation of the model at the North Carolina State University College of Veterinary Medicine and focuses on five broad outcome categories: intellectual growth; mental and emotional health; social distance reduction; cultural competence; and physical health. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: August 28, 2019

2016 journal article

Correction: Comparison of Active Drug Concentrations in the Pulmonary Epithelial Lining Fluid and Interstitial Fluid of Calves Injected with Enrofloxacin, Florfenicol, Ceftiofur, or Tulathromycin.

PloS One.

Derek Foster

TL;DR: This research presents a novel probabilistic procedure that allows for direct measurement of the response of the immune system to earthquake-triggered landsliding. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: ORCID
Added: August 21, 2019

2016 conference paper

Reproducible research workflow in R for the analysis of personalized human microbiome data

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 21, 183.

By: B. Callahan, D. Proctor, D. Relman, J. Fukuyama & S. Holmes

Event: NIH Public Access

Source: ORCID
Added: August 21, 2019

2016 journal article

Alternative lengthening of telomeres does exist in various canine sarcomas.

Molecular Carcinogenesis, 3.

By: T. Kreilmeier*, S. Sampl*, A. Deloria*, I. Walter*, M. Reifinger*, M. Hauck n, L. Borst n, K. Holzmann*, M. Kleiter*

author keywords: telomerase-independent; non-determined TMM; telomere length; dog; comparative; cancer
MeSH headings : Animals; Cell Line, Tumor; DNA Helicases / genetics; Dog Diseases / genetics; Dog Diseases / pathology; Dogs; Gene Expression Regulation, Neoplastic; Humans; Neuroblastoma / genetics; Neuroblastoma / pathology; Nuclear Proteins / genetics; Sarcoma / genetics; Sarcoma / pathology; Sarcoma / veterinary; Telomere / genetics; Telomere Homeostasis; Tumor Suppressor Protein p53 / genetics; X-linked Nuclear Protein
TL;DR: It is demonstrated that canine sarcomas use alternative lengthening of telomeres (ALT), a telomere maintenance mechanism found in some human tumors such as sarcoma, which seems to share many similarities with their human counterparts and appear an attractive model for comparativeTelomere research. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Source: ORCID
Added: August 20, 2019

2016 journal article

World Health Organization Ranking of Antimicrobials According to Their Importance in Human Medicine: A Critical Step for Developing Risk Management Strategies to Control Antimicrobial Resistance From Food Animal Production

Clinical Infectious Diseases, 63(8), 1087–1093.

By: P. Collignon*, J. Conly*, A. Andremont*, S. McEwen*, A. Aidara-Kane*, Y. Agerso*, T. Ninh*, P. Donado-Godoy* ...

Ed(s): P. Griffin

author keywords: antimicrobials; risk management; animals; antimicrobial resistance; food production
MeSH headings : Animals; Anti-Infective Agents / pharmacology; Anti-Infective Agents / therapeutic use; Drug Resistance, Microbial; Drug and Narcotic Control; Food Safety; Humans; Risk Management; World Health Organization
TL;DR: The current large-scale use of fluoroquinolones, macrolides, and third-generation cephalosporins and any potential use of glycopeptides and carbapenems need to be addressed urgently. (via Semantic Scholar)
Source: Crossref
Added: July 30, 2019

2016 journal article

Isolation Method (Direct Plating or Enrichment) does Not Affect Antimicrobial Susceptibility of Campylobacter from Chicken Carcasses

Journal of Food Safety, 37(1), e12279.

By: S. Ladely*, R. Meinersmann*, J. Plumblee* & P. Fedorka-Cray n

TL;DR: The data indicate that bacterial isolation method can bias Campylobacter species recovery, but isolation method did not significantly affect antimicrobial susceptibility results of C. jejuni or C. coli recovered from broiler carcasses. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Crossref
Added: July 29, 2019

2016 journal article

Prevalence and Antimicrobial Resistance of Salmonella Isolated from Cattle Feces in United States Feedlots in 2011

Foodborne Pathogens and Disease, 13(9), 483–489.

By: D. Dargatz*, C. Kopral*, M. Erdman & P. Fedorka-Cray*

MeSH headings : Animals; Anti-Bacterial Agents / classification; Anti-Bacterial Agents / pharmacology; Cattle; Cattle Diseases / epidemiology; Cattle Diseases / microbiology; Drug Resistance, Bacterial / drug effects; Feces / microbiology; Logistic Models; Microbial Sensitivity Tests / veterinary; Phenotype; Prevalence; Salmonella / classification; Salmonella / isolation & purification; Salmonella Infections, Animal / epidemiology; Serotyping; United States / epidemiology
TL;DR: The results of this study indicate that the prevalence of Salmonella in individual fecal samples was less than 10%, but thatSalmonella is widely distributed among feedlot cattle and there is a low occurrence of antimicrobial resistance with the exception of tetracycline and sulfisoxazole. (via Semantic Scholar)
Source: Crossref
Added: July 29, 2019

2016 journal article

Attribution of Salmonella enterica serotype Hadar infections using antimicrobial resistance data from two points in the food supply system

Epidemiology and Infection, 144(9), 1983–1990.

By: A. Vieira*, J. Grass*, P. Fedorka Cray*, J. Plumblee*, H. Tate* & D. Cole*

author keywords: Analysis of data; foodborne infections; surveillance
MeSH headings : Animals; Anti-Bacterial Agents / pharmacology; Cattle; Chickens; Drug Resistance, Bacterial; Electrophoresis, Gel, Pulsed-Field; Food Supply; Foodborne Diseases / microbiology; Humans; Meat / microbiology; Molecular Typing; Salmonella Infections / microbiology; Salmonella Infections, Animal / microbiology; Salmonella enterica / classification; Salmonella enterica / drug effects; Salmonella enterica / genetics; Salmonella enterica / isolation & purification; Serogroup; Swine; Turkeys
TL;DR: The use of antimicrobial resistance data on isolates of Salmonella enterica serotype Hadar, collected from ill humans, food animals, and from retail meats, in two microbial subtyping attribution models support the view that microbialSubtyping models are a flexible and robust approach for attributingSalmonella Hadar. (via Semantic Scholar)
Source: Crossref
Added: July 29, 2019

2016 journal article

Sorting out relationships among the grouse and ptarmigan using intron, mitochondrial, and ultra-conserved element sequences

Molecular Phylogenetics and Evolution, 98, 123–132.

author keywords: Ultra-conserved elements; Cyto-nuclear discordance; Biogeography; Species tree
MeSH headings : Animals; Cell Nucleus / genetics; Conserved Sequence / genetics; DNA, Mitochondrial / genetics; Evolution, Molecular; Female; Galliformes / classification; Galliformes / genetics; Introns / genetics; Male; Phylogeny; Sequence Analysis, DNA
TL;DR: Biogeographic analysis suggests that the ancestors of grouse and ptarmigan were distributed in the New World and subsequently underwent at least four dispersal events between the Old and New Worlds. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: July 27, 2019

2016 journal article

Analysis of a Rapid Evolutionary Radiation Using Ultraconserved Elements: Evidence for a Bias in Some Multispecies Coalescent Methods

Systematic Biology, 65(4), 612–627.

author keywords: Galliformes; gene tree estimation error; Phasianidae; polytomy; supermatrix rooted triplets; Triplec; total evidence
MeSH headings : Biological Evolution; Classification / methods; High-Throughput Nucleotide Sequencing; Models, Biological; Phylogeny; Probability
TL;DR: The results suggest that UCE data have excellent prospects for the resolution of difficult evolutionary radiations, though specific attention may need to be given to the details of the methods used to estimate species trees. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: July 27, 2019

2016 journal article

1,2-Dichloroethane Exposure Alters the Population Structure, Metabolism, and Kinetics of a Trichloroethene-Dechlorinating Dehalococcoides mccartyi Consortium

Environmental Science & Technology, 50(22), 12187–12196.

MeSH headings : Biodegradation, Environmental; Chloroflexi / metabolism; Halogenation; Kinetics; Trichloroethylene / metabolism; Vinyl Chloride / metabolism
TL;DR: The structure of Dehalococcoides populations in a continuously fed reactor system under changing chloroethene/ethane influent conditions was investigated and it was observed that increasing the influent ratio of 1,2-dichloroethane to trichloraethene was associated with ecological selection of a tceA-containing Dehalitis mccartyi population relative to a vcrA- containing De Halococcoide population. (via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation (OpenAlex)
Sources: Crossref, ORCID
Added: July 21, 2019

2016 journal article

Bioconductor Workflow for Microbiome Data Analysis: from raw reads to community analyses

F1000Research, 5, 1492.

TL;DR: By providing a complete workflow in R, this paper enables the user to do sophisticated downstream statistical analyses, whether parametric or nonparametric, and provides examples of using the R packages dada2, phyloseq, DESeq2, ggplot2 and vegan to filter, visualize and test microbiome data. (via Semantic Scholar)
Sources: Crossref, ORCID
Added: July 21, 2019

2016 journal article

DADA2: High-resolution sample inference from Illumina amplicon data

Nature Methods, 13(7), 581–583.

By: B. Callahan*, P. McMurdie*, M. Rosen*, A. Han*, A. Johnson* & S. Holmes*

MeSH headings : Animals; Cohort Studies; Computational Biology / methods; DNA, Bacterial / genetics; False Positive Reactions; Feces / microbiology; Female; High-Throughput Nucleotide Sequencing / methods; Humans; Lactobacillus / classification; Lactobacillus / genetics; Lactobacillus / isolation & purification; Mice; Microbiota / genetics; Pregnancy; RNA, Ribosomal, 16S / genetics; Reproducibility of Results; Sequence Analysis, DNA / methods; Software; Vagina / microbiology
TL;DR: The open-source software package DADA2 for modeling and correcting Illumina-sequenced amplicon errors is presented, revealing a diversity of previously undetected Lactobacillus crispatus variants. (via Semantic Scholar)
Sources: Crossref, ORCID
Added: July 21, 2019

2016 journal article

Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea

Nature Communications, 7(1), 10516.

MeSH headings : Animals; Bacteroidetes / genetics; Bottle-Nosed Dolphin / microbiology; Gastrointestinal Microbiome / genetics; Microbiota / genetics; Mouth / microbiology; Phylogeny; RNA, Ribosomal, 16S / genetics; Respiratory System / microbiology; Sea Lions / microbiology; Seawater / microbiology; Sequence Analysis, RNA; Tenericutes / genetics; Water Microbiology
TL;DR: The bacterial communities associated with various body sites in dolphins and sea lions, as well as the microbiota of their dietary fish and adjacent seawater are described, helping elucidate the factors structuring marine mammal microbiotas and may enhance monitoring of marine mammal health. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Crossref, ORCID
Added: July 21, 2019

2016 journal article

Comparison of Active Drug Concentrations in the Pulmonary Epithelial Lining Fluid and Interstitial Fluid of Calves Injected with Enrofloxacin, Florfenicol, Ceftiofur, or Tulathromycin

PLOS ONE, 11(2), e0149100.

By: D. Foster n, L. Martin n & M. Papich n

Ed(s): J. Torrelles

MeSH headings : Animals; Anti-Bacterial Agents / blood; Anti-Bacterial Agents / pharmacokinetics; Biological Availability; Cattle; Cephalosporins / blood; Cephalosporins / pharmacokinetics; Cross-Over Studies; Disaccharides / blood; Disaccharides / pharmacokinetics; Enrofloxacin; Epithelial Cells / metabolism; Extracellular Fluid / chemistry; Extracellular Fluid / metabolism; Fluoroquinolones / blood; Fluoroquinolones / pharmacokinetics; Heterocyclic Compounds / blood; Heterocyclic Compounds / pharmacokinetics; Lung / metabolism; Male; Mannheimia haemolytica / drug effects; Mannheimia haemolytica / growth & development; Microbial Sensitivity Tests; Respiratory Mucosa / metabolism; Thiamphenicol / analogs & derivatives; Thiamphenicol / blood; Thiamphenicol / pharmacokinetics; Veterinary Drugs / blood; Veterinary Drugs / pharmacokinetics
TL;DR: The bronchial concentrations were higher than the plasma or interstitial concentrations, with over 900% penetration to the airways, and the tulathromycin concentrations achieved were lower than the MIC of susceptible bacteria at most time points. (via Semantic Scholar)
Sources: Crossref, ORCID, NC State University Libraries
Added: July 20, 2019

2016 journal article

Comparison of lipopolysaccharides and soluble CD14 measurement between clinically endotoxaemic and nonendotoxaemic horses

Equine Veterinary Journal, 49(2), 155–159.

author keywords: horse; soluble CD14; endotoxin; sepsis; inflammation; colic
MeSH headings : Animals; Biomarkers / blood; Endotoxemia / blood; Endotoxemia / veterinary; Horse Diseases / blood; Horse Diseases / diagnosis; Horses; Lipopolysaccharide Receptors / blood; Lipopolysaccharides
TL;DR: It is suggested that sCD14 and LPS were poor predictors of clinical endotoxaemia for the horses in this study, and further investigation is warranted to assess the utility of s CD14 measurement as a clinically useful biomarker to identify endotox aemia in horses. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Source: Crossref
Added: July 20, 2019

2016 journal article

Extreme lymphocytosis with myelomonocytic morphology in a horse with diffuse large B-cell lymphoma

Veterinary Clinical Pathology, 46(1), 64–71.

By: K. Meichner*, B. Kraszeski n, J. Durrant n, C. Grindem n, B. Breuhaus n, P. Moore*, J. Neel n, K. Linder n ...

author keywords: Clonality; equine; leukemia; leukocytosis; lymphoid
MeSH headings : Animals; Female; Horse Diseases / diagnostic imaging; Horse Diseases / pathology; Horses; Immunohistochemistry / veterinary; Lymphocytosis / diagnostic imaging; Lymphocytosis / pathology; Lymphocytosis / veterinary; Lymphoma, B-Cell / diagnostic imaging; Lymphoma, B-Cell / pathology; Lymphoma, B-Cell / veterinary; Microscopy, Electron, Transmission / veterinary; T-Lymphocytes / pathology
TL;DR: An 11-year-old Haflinger mare presented to the North Carolina State University Veterinary Teaching Hospital with a 2-week history of lethargy and a 3-day duration of anorexia, pyrexia, tachycardia, and ventral edema was diagnosed with diffuse large B-cell lymphoma with a marked hematogenous component. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Crossref, ORCID
Added: July 20, 2019

2016 journal article

Owner reported diseases of working equids in central Ethiopia

Equine Veterinary Journal, 49(4), 501–506.

By: A. Stringer*, R. Christley*, C. Bell*, F. Gebreab*, G. Tefera*, K. Reed, A. Trawford*, G. Pinchbeck*

author keywords: horse; working equid; participatory; disease; health; donkey
MeSH headings : Animal Husbandry; Animals; Colic; Equidae; Ethiopia / epidemiology; Female; Horse Diseases / epidemiology; Horse Diseases / etiology; Horses; Male; Prevalence; Surveys and Questionnaires
TL;DR: This participatory study with owners identified previously unreported priorities such as rabies in donkeys, an unidentified musculoskeletal syndrome in horses and respiratory signs in both horses and donkeys. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: July 20, 2019

2016 journal article

Reproducible research workflow in R for the analysis of personalized human microbiome data

Pacific Symposium on Biocomputing, 21, 183–194.

By: B. Callahan, D. Proctor, D. Relman, J. Fukuyama & S. Holmes

Source: NC State University Libraries
Added: July 11, 2019

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