Works Published in 2017

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Displaying all 12 works

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2017 journal article

Potential for ethanol production from different sorghum cultivars

Industrial Crops and Products, 109, 367–373.

By: E. Castro*, I. Nieves*, V. Rondón*, W. Sagues*, M. Fernández-Sandoval*, L. Yomano*, S. York*, J. Erickson*, W. Vermerris*

author keywords: Sweet sorghum; Bioethanol; Phosphoric acid pretreatment; L plus SScF; E. coil
Source: ORCID
Added: July 28, 2020

2017 journal article

Combining urease and nitrification inhibitors with incorporation reduces ammonia and nitrous oxide emissions and increases corn yields

Journal of Environmental Quality, 46(5), 939–949.

By: C. Drury*, X. Yang*, W. Reynolds*, W. Calder*, T. Oloya* & A. Woodley*

Contributors: C. Drury*, X. Yang*, W. Reynolds*, W. Calder*, T. Oloya* & A. Woodley*

MeSH headings : Ammonia / analysis; Denitrification; Fertilizers; Nitrification; Nitrous Oxide / analysis; Urease; Zea mays
TL;DR: Ammonia losses were lower and crop yields were greater in 2014 than 2013 as a result of the more favorable weather when N was applied in 2014, and pollution swapping was avoided when both inhibitors were used. (via Semantic Scholar)
Source: ORCID
Added: June 17, 2020

2017 journal article

Production Risk, Farmer Welfare, and Bt Corn in the Philippines

Agricultural and Resource Economics Review, 46(3), 507–528.

By: S. Sanglestsawai, D. Rodriguez, R. Rejesus* & J. Yorobe

author keywords: Bt corn; damage abatement; downside risk; GM crop; production risk; skewness; stochastic production function
UN Sustainable Development Goal Categories
1. No Poverty (Web of Science)
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Source: Crossref
Added: February 24, 2020

2017 journal article

Temporal variability in the importance of hydrologic, biotic, and climatic descriptors of dissolved oxygen dynamics in a shallow tidal-marsh creek

Water Resources Research, 53(8), 7103–7120.

By: N. Nelson*, R. Muñoz-Carpena*, P. Neale*, M. Tzortziou* & J. Megonigal*

Contributors: N. Nelson*, R. Muñoz-Carpena*, P. Neale*, M. Tzortziou* & J. Megonigal*

Sources: ORCID, Crossref, NC State University Libraries
Added: December 31, 2019

2017 journal article

A novel quantile method reveals spatiotemporal shifts in phytoplankton biomass descriptors between bloom and non-bloom conditions in a subtropical estuary

Marine Ecology Progress Series, 567, 57–78.

Contributors: N. Nelson*, R. Muñoz-Carpena & E. Phlips

author keywords: Quantile regression; Time series modeling; Spatial patterns; Cyanobacteria; Florida Bay
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Source: ORCID
Added: December 31, 2019

2017 journal article

Improving Gene Regulatory Network Inference by Incorporating Rates of Transcriptional Changes

Scientific Reports.

MeSH headings : Algorithms; Animals; Circadian Clocks / genetics; Computational Biology / methods; Gene Regulatory Networks; Humans; Mice; Transcription Factors / metabolism; Transcription, Genetic
TL;DR: ExRANGES improved the identification of experimentally validated transcription factor targets for all species tested, even in unevenly spaced and sparse data sets, and enhances the utility of network inference approaches in non-model species where experimental validation is challenging. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: June 25, 2019

2017 chapter

A proteomic based quantitative analysis of the relationship between monolignol biosynthetic protein abundance and lignin content using transgenic Populus trichocarpa

In V. C. Kumi Yoshida & S. Quideau (Eds.), Recent Advances in Polyphenol Research. Volume 5.

By: T. Wang J.P., Y. Shi R., I. Chuang L., L. Yang C., Q. Li, N. Loziuk P.L., D. Muddiman D.C., S. Williams C.M., C. V.L.

Ed(s): V. Kumi Yoshida & S. Quideau

UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: NC State University Libraries
Added: August 6, 2018

2017 article

The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology

Friesner, J., Assmann, S. M., Bastow, R., Bailey-Serres, J., Beynon, J., Brendel, V., … Brady, S. M. (2017, December). PLANT PHYSIOLOGY, Vol. 175, pp. 1499–1509.

By: J. Friesner*, S. Assmann*, R. Bastow*, J. Bailey-Serres*, J. Beynon*, V. Brendel*, C. Buell*, A. Bucksch* ...

MeSH headings : Arabidopsis / genetics; Computational Biology / education; Cooperative Behavior; Faculty; Phenotype; Research / education
TL;DR: Training for experimental plant biologists needs to combine bioinformatics, quantitative approaches, computational biology, and training in the art of collaboration, best achieved through fully integrated curriculum development. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2017 journal article

Reciprocal cross-regulation of VND and SND multigene TF families for wood formation in Populus trichocarpa

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 114(45), E9722–E9729.

By: Y. Lin n, H. Chen n, Q. Li*, W. Li n, J. Wang n, R. Shi n, S. Tunlaya-Anukit n, P. Shuai n ...

Contributors: Y. Lin n, H. Chen n, Q. Li*, W. Li n, J. Wang n, R. Shi n, S. Tunlaya-Anukit n, P. Shuai n ...

author keywords: reciprocal cross-regulation; NAC transcription factors; alternative splicing; wood formation; Populus trichocarpa
MeSH headings : Alternative Splicing; Cell Wall / genetics; Cell Wall / metabolism; Cloning, Molecular; DNA, Plant; Gene Expression Regulation, Plant / genetics; Gene Regulatory Networks; Genes, Plant; Homeostasis; Multigene Family; Nuclear Proteins; Plant Leaves / genetics; Plant Leaves / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Shoots / genetics; Plant Shoots / metabolism; Populus / genetics; Populus / metabolism; Recombinant Proteins / genetics; Transcription Factors / genetics; Transcription Factors / metabolism; Transcriptional Activation / genetics; Transcriptome; Wood / genetics; Wood / growth & development; Xylem / genetics; Xylem / growth & development
TL;DR: The results indicate that the splice variants from the PtrVND6 and PtrSND1 family may exert reciprocal cross-regulation for complete transcriptional regulation of these two families in wood formation, suggesting a general mechanism among NAC domain proteins and likely other transcription factors. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Benefits of the development and dissemination of climate-smart rice: ex ante impact assessment of drought-tolerant rice in South Asia

MITIGATION AND ADAPTATION STRATEGIES FOR GLOBAL CHANGE, 22(6), 879–901.

By: K. Mottaleb*, R. Rejesus n, M. Murty*, S. Mohanty* & T. Li*

author keywords: Climate change; Drought tolerance; Exante economic impact; Rice varieties; South Asia
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2017 journal article

Tissue and cell-type co-expression networks of transcription factors and wood component genes in Populus trichocarpa

PLANTA, 245(5), 927–938.

Contributors: R. Shi n, J. Wang n, Y. Lin n, Q. Li*, Y. Sun*, H. Chen n, R. Sederoff n, V. Chiang*

author keywords: Wood formation; Transcriptome; Fiber cells; Vessel elements; Cell wall biosynthesis; Co-expression network
MeSH headings : Cell Wall / metabolism; Cellulose / metabolism; Cluster Analysis; Gene Expression Regulation, Plant; Lignin / metabolism; Molecular Sequence Annotation; Organ Specificity; Phloem / genetics; Phloem / growth & development; Plant Leaves / genetics; Plant Leaves / growth & development; Plant Proteins / genetics; Populus / genetics; Populus / growth & development; Sequence Analysis, RNA; Transcription Factors / genetics; Transcriptome; Wood / genetics; Wood / growth & development; Xylem / genetics; Xylem / growth & development
TL;DR: The co-expression networks revealed here suggest a well-structured transcriptional homeostasis for cell wall component biosynthesis during wood formation. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Plant Stress Tolerance Requires Auxin-Sensitive Aux/IAA Transcriptional Repressors

CURRENT BIOLOGY, 27(3), 437–444.

By: E. Shani*, M. Salehin*, Y. Zhang*, S. Sanchez*, C. Doherty n, R. Wang*, C. Mangado, L. Song* ...

MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / physiology; Arabidopsis Proteins / antagonists & inhibitors; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Gene Expression Regulation, Plant / drug effects; Indoleacetic Acids / metabolism; Plant Growth Regulators / metabolism; Plants, Genetically Modified; Repressor Proteins / genetics; Repressor Proteins / metabolism; Stress, Physiological
TL;DR: It is hypothesized that transcriptional control of Aux/IAA genes plays a central role in the establishment of the auxin-signaling pathways that regulate organogenesis, growth, and environmental response, and it is demonstrated that stress pathways interact with the auxIn gene regulatory network (GRN) through transcription of the Aux/ IAA genes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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