Works Published in 2015

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Displaying works 1 - 20 of 92 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2015 book

PASCO '15 Proceedings of the 2015 International Workshop on Parallel Symbolic Computation

New York, NY: Association for Computing Machinery.

Erich Kaltofen

Ed(s): J. Dumas, E. Kaltofen & C. Pernet

Source: NC State University Libraries
Added: August 16, 2021

2015 report

Divavirus taxonomic bacteriophage group infecting Paenibacillus larvae

International Committee on the Taxonomy of Viruses.

By: E. Miller, J. Whittman, A. Kropinski & E. Areaenssesn

Source: NC State University Libraries
Added: February 6, 2021

2015 journal article

Bartonella henselaeas a cause of acute-onset febrile illness in cats

Journal of Feline Medicine and Surgery Open Reports, 1(2), 205511691560045.

By: E. Breitschwerdt n, J. Broadhurst & N. Cherry*

TL;DR: It is concluded that microbiological diagnosis and treatment of B henselae infection in cats can be challenging, that antibody titration results and resolution of clinical abnormalities may not correlate with a therapeutic cure, and that fever and potentially neutropenia should be differential diagnostic considerations for young cats with suspected bartonellosis. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: January 24, 2021

2015 journal article

Statistical Methods for Generalized Linear Models with Covariates Subject to Detection Limits

Statistics in Biosciences, 7(1), 68–89.

By: P. Bernhardt*, H. Wang n & D. Zhang n

author keywords: Censored predictor; Complete case; Conditional mean imputation; Detection limit; Improper multiple imputation
TL;DR: It is demonstrated that the conditional mean imputation method often leads to inconsistent estimates in generalized linear models, while several other methods are either computationally intensive or lead to parameter estimates that are biased or more variable compared to the proposed multiple imputation estimator. (via Semantic Scholar)
Source: Crossref
Added: November 21, 2020

2015 journal article

Genetic basis of transcriptome diversity in Drosophila melanogaster

Proceedings of the National Academy of Sciences, 112(44), E6010–E6019.

By: W. Huang n, M. Carbone n, M. Magwire n, J. Peiffer n, R. Lyman n, E. Stone n, R. Anholt n, T. Mackay n

author keywords: genome-wide association; novel transcribed regions; mean eQTLs; variance eQTLs; epistasis
MeSH headings : Animals; Drosophila melanogaster / genetics; Epistasis, Genetic; Quantitative Trait Loci; Transcriptome
TL;DR: High complexity of the genetic control of gene expression is found, including widespread sexual dimorphism, highly modularized expression patterns with involvement of novel RNA transcripts, and frequent epistatic interactions among expression quantitative trait loci (QTLs) which often give rise to variance expression QTLs. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Crossref
Added: February 24, 2020

2015 journal article

Genetic architecture of natural variation in Drosophila melanogaster aggressive behavior

Proceedings of the National Academy of Sciences, 112(27), E3555–E3563.

author keywords: Drosophila Genetic Reference Panel; genome-wide association mapping; extreme QTL mapping; advanced intercross population; epistasis
MeSH headings : Aggression; Animals; Crosses, Genetic; Drosophila Proteins / genetics; Drosophila Proteins / physiology; Drosophila melanogaster / classification; Drosophila melanogaster / genetics; Drosophila melanogaster / physiology; Epistasis, Genetic; Evolution, Molecular; Genes, Insect / genetics; Genes, Insect / physiology; Genetic Variation; Genome, Insect / genetics; Humans; Inbreeding; Mutation; RNA Interference; Species Specificity
TL;DR: This work performed genome-wide association analyses using the inbred, sequenced lines of the Drosophila melanogaster Genetic Reference Panel and an advanced intercross population derived from the most and least aggressive DGRP lines to identify genes that have been previously implicated in aggressive behavior as well as many novel loci. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Source: Crossref
Added: February 24, 2020

2015 journal article

Identification of conserved developmental pathways targeted by methylmercury in Drosophila melanogaster

Neurotoxicology and Teratology, 49, 141.

By: M. Rand*, S. Montgomery*, D. Vorojeikina*, W. Huang n, T. MacKay n & R. Anholt n

UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Crossref
Added: February 24, 2020

2015 journal article

Drosophotoxicolgy takes flight: Genomic elucidation of adverse outcome pathways of mercury toxicity in the fruit fly

Toxicology Letters, 238(2), S55.

By: M. Rand*, S. Montgomery*, D. Vorojeikina*, W. Huang n, T. MacKay n & R. Anholt n

UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Crossref
Added: February 24, 2020

2015 journal article

Dissecting the genetic architecture of behavior in Drosophila melanogaster

Current Opinion in Behavioral Sciences, 2, 1–7.

TL;DR: Drosophila melanogaster presents a powerful system for dissecting the genetic basis of behavioral phenotypes, since both the genetic background and environmental conditions can be controlled and behaviors accurately quantified. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science; OpenAlex)
Source: Crossref
Added: February 24, 2020

2015 journal article

Development of Abamectin Loaded Plant Virus Nanoparticles for Efficacious Plant Parasitic Nematode Control

ACS Applied Materials & Interfaces, 7(18), 9546–9553.

By: J. Cao n, R. Guenther n, T. Sit n, S. Lommel n, C. Opperman n & J. Willoughby n

author keywords: red clover necrotic mosaic virus (RCNMV); plant virus nanoparticle (PVN); abamectin; soil mobility; crop protection
MeSH headings : Animals; Biological Availability; Caenorhabditis elegans / drug effects; Capsid / chemistry; Crops, Agricultural / drug effects; Crops, Agricultural / parasitology; Ivermectin / analogs & derivatives; Ivermectin / pharmacology; Solanum lycopersicum / drug effects; Solanum lycopersicum / parasitology; Nanoparticles / chemistry; Nematoda / drug effects; Pest Control, Biological; Plant Diseases / parasitology; Plant Viruses / chemistry; Soil; Suspensions; Tobacco / drug effects; Tobacco / parasitology; Tylenchoidea / drug effects
TL;DR: Tomato seedlings treated with PVN(Abm) had healthier root growth and a reduction in root galling demonstrating the success of this delivery system for the increased efficacy of Abm to control nematode damage in crops. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Crossref
Added: February 24, 2020

2015 book

Exploiting solved genomes of plant-parasitic nematodes to understand parasitism

In Advances in Botanical Research (Vol. 73, pp. 241–258).

TL;DR: Comparative genomics has confirmed much of what had been deduced from expressed sequence tag sequencing, and expanded the understanding of the extent of horizontal gene transfer as a source of novelty during the evolution of parasitism. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Source: ORCID
Added: January 30, 2020

2015 journal article

Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity

ELife, 4.

By: W. Pope*, C. Bowman*, D. Russell*, D. Jacobs-Sera*, D. Asai*, S. Cresawn*, W. Jacobs*, R. Hendrix*, J. Lawrence*, G. Hatfull*

MeSH headings : Biomedical Research / ethics; Cooperative Behavior; DNA, Viral / genetics; Gene Flow; Genetic Variation; Genome, Viral; High-Throughput Nucleotide Sequencing; Information Dissemination; Mosaicism; Mycobacteriophages / classification; Mycobacteriophages / genetics; Mycobacterium smegmatis / virology; Phylogeny; Phylogeography; Workforce
TL;DR: To understand the population structure of phages infecting a single host strain, 627 phages of Mycobacterium smegmatis were isolated, sequenced, and compared to reveal a continuum of genetic diversity, albeit with uneven representation of different phages. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020

2015 journal article

Genome Sequences of Six Paenibacillus larvae Siphoviridae Phages

Genome Announcements, 3(3).

By: S. Carson n, E. Bruff, W. DeFoor, J. Dums, A. Groth, T. Hatfield, A. Iyer, K. Joshi ...

TL;DR: Six sequenced and annotated genomes of Paenibacillus larvae phages isolated from the combs of American foulbrood-diseased beehives show Phage Lily is most divergent from Diva, Rani, Redbud, Shelly, and Sitara. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020

2015 conference paper

Population structure of the obligate biotroph Peronospora tabacina, the cause of blue mold of tobacco

PHYTOPATHOLOGY, 105(11), 55–55.

By: D. Hadziabdic, P. Wadl, F. Runge, J. Ristaino, O. Spring & R. Trigiano

Event: AMER PHYTOPATHOLOGICAL SOC 3340 PILOT KNOB ROAD, ST PAUL, MN 55121 USA

Source: ORCID
Added: December 20, 2019

2015 journal article

The Top 10 oomycete pathogens in molecular plant pathology

Molecular Plant Pathology, 16(4), 413–434.

By: S. Kamoun, O. Furzer, J. Jones, H. Judelson, G. Ali, R. Dalio, S. Roy, L. Schena ...

Source: ORCID
Added: December 20, 2019

2015 conference paper

Molecular characterization and genetic diversity of Mycospharella fijiensis, in Costa Rica using sequence based nuclear markers

PHYTOPATHOLOGY, 105(11), 27–27.

By: S. Chavan, M. Wyatt, L. Alpizar, M. Munoz & J. Ristaino

Event: AMER PHYTOPATHOLOGICAL SOC 3340 PILOT KNOB ROAD, ST PAUL, MN 55121 USA

Source: ORCID
Added: December 20, 2019

2015 journal article

Influence of organic waste amendments on selected soil physical and chemical properties.

Journal of Agronomy, 14(4), 1–11.

By: E. Kabil, M. Faize, K. Makroum, O. Assobhei, M. Rafrafi, M. Loizidou, A. Aajjane, M. Abdel-Fattah ...

Source: ORCID
Added: December 20, 2019

2015 conference paper

Evolutionary origins of US and famine-era lineages of Phytophthora infestans

PHYTOPATHOLOGY, 105(11), 118–119.

By: J. Ristaino, A. Saville, M. Martin & M. Gilbert

Event: AMER PHYTOPATHOLOGICAL SOC 3340 PILOT KNOB ROAD, ST PAUL, MN 55121 USA

Source: ORCID
Added: December 20, 2019

2015 journal article

Genomic Characterization of a South American Phytophthora Hybrid Mandates Reassessment of the Geographic Origins of Phytophthora infestans

Molecular Biology and Evolution, 33(2), 478–491.

author keywords: Phytophthora infestans; Phytophthora andina; plant disease; population genomics; phylogenomics; pathogen
MeSH headings : Evolution, Molecular; Gene Flow; Genome; Genome, Mitochondrial; Genomics / methods; Genotype; Haplotypes; Hybridization, Genetic; Linkage Disequilibrium; Phylogeny; Phytophthora infestans / classification; Phytophthora infestans / genetics; Plant Diseases; Reproduction / genetics; South America
TL;DR: It is shown that basal branches of the clade comprising Mexican samples are occupied by clonal isolates collected from wild Solanum hosts, suggesting that modern Mexican P. infestans diversified on Solanums tuberosum after a host jump from a wild species and that the origins of P.infestans are more complex than was previously thought. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Crossref, ORCID
Added: December 20, 2019

2015 journal article

Five reasons to consider Phytophthora infestans a reemerging pathogen

Phytopathology, 105(7), 966–981.

By: W. Fry, P. Birch, H. Judelson, N. Grünwald, G. Danies, K. Everts, A. Gevens, B. Gugino ...

Source: ORCID
Added: December 20, 2019

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