Works Published in 2020

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Displaying works 1 - 20 of 73 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2020 journal article

A Note on Sparse Polynomial Interpolation in Dickson Polynomial Basis

ACM COMMUNICATIONS IN COMPUTER ALGEBRA, 54(4), 125–128.

TL;DR: The sparsity t≪ deg(f) with respect to the basis Pn has been exploited in interpolation algorithms that reconstruct the degree/coefficient expansion (δj, cj)1≤j≤t from values ai = f(γi) at the arguments x ← γi ∈ K. (via Semantic Scholar)
Source: Web Of Science
Added: June 10, 2021

2020 article

Molecular mechanisms that activate convergent oncogenic pathway in genomically complex angiosarcoma

Kim, J. H., Megquier, K., Sarver, A. L., Thomas, R., Schulte, A. J., Wang, C., … Modiano, J. F. (2020, August). CANCER RESEARCH, Vol. 80.

By: J. Kim*, K. Megquier*, A. Sarver*, R. Thomas n, A. Schulte*, C. Wang*, I. Elvers*, E. Karlsson* ...

TL;DR: The data suggests that genomic instability induced by TP53 mutations might create a predisposition for fusion events that may contribute to tumor progression by promoting selection and/or enhancing fitness through activation of convergent angiogenic pathways. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: Web Of Science
Added: March 8, 2021

2020 article

A comparative oncology approach to biomarker and drug discovery for cancer diagnosis and treatment in dogs and humans

LeBlanc, A. K., Mazcko, C. N., Breen, M., Thomas, R., & Thamm, D. H. (2020, August). CANCER RESEARCH, Vol. 80.

TL;DR: This work exemplifies the type of approach meant to further establish the comparative relevance of canine to human cancer and provide opportunities to explore hypotheses related to detection and treatment in both species. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: Web Of Science
Added: March 8, 2021

2020 journal article

Novel Rickettsia Species Infecting Dogs, United States

EMERGING INFECTIOUS DISEASES, 26(12), 3011–3015.

By: J. Wilson n, E. Breitschwerdt n, N. Juhasz n, H. Marr n, J. Galvao n, C. Pratt n, B. Qurollo n

MeSH headings : Animals; Dog Diseases / epidemiology; Dogs; Phylogeny; Rickettsia / genetics; Rickettsia Infections / epidemiology; Rickettsia Infections / veterinary; United States / epidemiology
TL;DR: Multilocus phylogenetic analysis showed the dogs were infected with a novel Rickettsia species related to humanRickettsia pathogens. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: February 15, 2021

2020 journal article

Caspases from scleractinian coral show unique regulatory features

JOURNAL OF BIOLOGICAL CHEMISTRY, 295(43), 14578–14591.

By: S. Shrestha*, J. Tung*, R. Grinshpon n, P. Swartz n, P. Hamilton n, B. Dimos*, L. Mydlarz*, A. Clark*

author keywords: caspase; cysteine protease; allosteric regulation; substrate specificity; coral apoptosis; coral immunity; functional divergence; substrate selection; CARD-caspase; apoptosis
MeSH headings : Amino Acid Sequence; Animals; Anthozoa / chemistry; Anthozoa / cytology; Anthozoa / enzymology; Anthozoa / metabolism; Apoptosis; Caspases / chemistry; Caspases / metabolism; Coral Reefs; Crystallography, X-Ray; Enzyme Activation; Humans; Models, Molecular; Protein Conformation; Protein Domains; Sequence Alignment; Substrate Specificity
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Source: Web Of Science
Added: February 8, 2021

2020 chapter

The Threat of Late Blight to Global Food Security

In J. B. Ristaino & A. Records (Eds.), Emerging Plant Disease and Global Food Security. St. Paul, Minnesota: American Phytopathological Society Press.

By: J. Ristaino, D. Cooke, I. Acuna & M. Munoz

Ed(s): J. Ristaino & A. Records

Source: NC State University Libraries
Added: February 6, 2021

2020 book

Emerging Plant Disease and Global Food Security

St. Paul, Minnesota: American Phytopathological Society Press.

Jean Ristaino

Ed(s): J. Ristaino & A. Records

Source: NC State University Libraries
Added: February 6, 2021

2020 article

Absorption and Fluorescence Spectral Database of Chlorophylls and Analogues

PHOTOCHEMISTRY AND PHOTOBIOLOGY.

MeSH headings : Chlorophyll / analogs & derivatives; Chlorophyll / chemistry; Databases, Chemical; Molecular Structure; Spectrum Analysis / methods
TL;DR: The database encompasses photosynthetic tetrapyrroles wherein the chromophore is a porphyrin or chlorin and contains 305 absorption spectra and 72 fluorescence spectra that should facilitate comparisons and quantitative calculations. (via Semantic Scholar)
Source: NC State University Libraries
Added: January 29, 2021

2020 journal article

Distribution and risk factors of canine haemotropic mycoplasmas in hunting dogs from southern Italy

VETERINARY MICROBIOLOGY, 251.

By: L. Cortese*, M. Beall*, F. Buono*, J. Buch*, L. Pacifico*, B. Neola*, A. Palatucci*, P. Tyrrell* ...

author keywords: Mycoplasma haemocanis; Candidatus mycoplasma haematoparvum; Hunting dogs; Italy
MeSH headings : Animals; DNA, Bacterial / genetics; Dog Diseases / epidemiology; Dog Diseases / microbiology; Dogs; Female; Italy / epidemiology; Male; Mycoplasma / classification; Mycoplasma / genetics; Mycoplasma / isolation & purification; Mycoplasma / pathogenicity; Mycoplasma Infections / epidemiology; Mycoplasma Infections / veterinary; Prevalence; RNA, Ribosomal, 16S / genetics; Risk Factors; Tick Infestations / veterinary; Working Dogs / microbiology
TL;DR: Outdoor lifestyle and contact with wild fauna, through greater exposure to tick infestation, or possibly wounds acquired during hunting or fighting, could be factors contributing to haemoplasma infections. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: January 19, 2021

2020 journal article

Deeply Sequenced Infectious Clones of Key Cassava Begomovirus Isolates from Cameroon

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 9(46).

TL;DR: This work deeply sequenced two pairs of widely used infectious clones (4 plasmids) of the bipartite begomoviruses African cassava mosaic virus (ACMV) and East AfricanCassava mosaic Cameroon virus (EACMCV). (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: January 11, 2021

2020 journal article

Leveraging Multiple Layers of Data To Predict Drosophila Complex Traits

G3-GENES GENOMES GENETICS, 10(12), 4599–4613.

author keywords: Genomic prediction; Transcriptomic prediction; Gene Ontology informed prediction; Drosophila Genetic Reference Panel; GenPred; Shared data resources
MeSH headings : Animals; Drosophila; Drosophila melanogaster / genetics; Female; Genotype; Male; Models, Genetic; Multifactorial Inheritance; Phenotype; Polymorphism, Single Nucleotide
TL;DR: This study shows that integrating different sources of information can improve prediction accuracy, especially when large samples are not available, as well as a limited number of GO terms were strongly predictive of the traits. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Web Of Science
Added: January 4, 2021

2020 review

Phytopathogenic Cercosporoid Fungi-From Taxonomy to Modern Biochemistry and Molecular Biology

[Review of ]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 21(22).

author keywords: cercosporoid fungi; Cercospora s; lat; cercosporin; pathogenesis; enzymes; biotechnological application
MeSH headings : Ascomycota / classification; Ascomycota / genetics; Ascomycota / metabolism; Biosynthetic Pathways / physiology; Gene Expression Regulation, Fungal / physiology; Plant Diseases / microbiology
TL;DR: Phytopathogenic cercosporoid fungi have been investigated comprehensively due to their important role in causing plant diseases, with less of a focus on molecular or biochemical issues. (via Semantic Scholar)
Source: Web Of Science
Added: December 21, 2020

2020 journal article

A fast, flexible and inexpensive protocol for DNA and RNA extraction for forest trees

FOREST SYSTEMS, 29(2).

By: Y. Kurt*, L. Matallana-Ramirez n, W. Kohlway n, R. Whetten n & J. Frampton n

author keywords: Angiosperms; gymnosperms; isolation protocol; nucleic acids
TL;DR: It was demonstrated that high quality and high molecular weight nucleic acids for Next-Generation Sequencing applications can be isolated from hundreds of samples from a wide range of taxonomic groups. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: December 14, 2020

2020 journal article

Bartonella Associated Cutaneous Lesions (BACL) in People with Neuropsychiatric Symptoms

Pathogens, 9(12), 1023.

By: E. Breitschwerdt n, J. Bradley n, R. Maggi n, E. Lashnits n & P. Reicherter*

author keywords: infection; bacteria; psychoses; transmission; stretch marks; bartonella; neuropsychiatric; cutaneous lesions; BACL
TL;DR: It is concluded that cutaneous lesions were common among people reporting neuropsychiatric symptoms and Bartonella spp. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Source: ORCID
Added: December 5, 2020

2020 journal article

Genotype by environment interaction for gene expression in Drosophila melanogaster

NATURE COMMUNICATIONS, 11(1).

MeSH headings : Animals; Drosophila melanogaster / genetics; Female; Gene Expression; Gene Expression Regulation; Gene Regulatory Networks; Gene-Environment Interaction; Genes, Insect; Genetic Variation; Genotype; Male; Quantitative Trait Loci; RNA-Seq; Temperature; Transcriptome
TL;DR: It is shown that developing under different temperatures changes the genetic architecture of regulatory variation in Drosophila melanogaster gene expression yet the co- expression network remains robust, and data suggest that stabilizing selection on gene expression may promote co-expression network robustness. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: November 30, 2020

2020 journal article

Assembly of whole-chromosome pseudomolecules for polyploid plant genomes using outbred mapping populations

NATURE GENETICS, 52(11), 1256-+.

MeSH headings : Algorithms; Chromosomes, Plant; Computer Simulation; Genetic Linkage; Genome, Plant; Genotype; Ipomoea / genetics; Plant Breeding; Poaceae / genetics; Polyploidy; Protein Array Analysis; Solanum tuberosum / genetics
TL;DR: PolyGembler, a method for grouping and ordering contigs into complete pseudomolecules by combining long-read sequencing and genotype information from an outbred mapping population, improves the accuracy for assembly of polyploidy plant genomes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Source: Web Of Science
Added: November 24, 2020

2020 article

Cyst nematode bio-communication with plants: implications for novel management approaches

PEST MANAGEMENT SCIENCE.

By: J. Ochola*, D. Coyne*, L. Cortada*, S. Haukeland*, M. Ng'ang'a*, A. Hassanali*, C. Opperman n, B. Torto*

MeSH headings : Animals; Communication; Cysts; Nematoda; Pest Control; Plants
TL;DR: Cyst nematode hatching and successful infection of hosts are biological processes that are largely influenced by semiochemicals including hatching stimulators, hatching inhibitors, attractants and repellents, which can be used to disrupt interactions between host plants and cyst Nemesis. (via Semantic Scholar)
Source: Web Of Science
Added: November 24, 2020

2020 review

Microbial Interactions Within Multiple-Strain Biological Control Agents Impact Soil-Borne Plant Disease

[Review of ]. FRONTIERS IN MICROBIOLOGY, 11.

By: B. Niu*, W. Wang*, Z. Yuan*, R. Sederoff n, H. Sederoff n, V. Chiang n, R. Borriss*

author keywords: microbial interaction; biological control agents; soil-borne disease; consortia; microbiome and community
TL;DR: The current state of the use of single strain and multi-strain biological control consortia in the management of soil-borne diseases and potential mechanisms used by microbial components to improve the disease suppressing efficacy are summarized. (via Semantic Scholar)
Source: Web Of Science
Added: November 16, 2020

2020 journal article

Comparing DNA replication programs reveals large timing shifts at centromeres of endocycling cells in maize roots

PLOS GENETICS, 16(10).

By: E. Wear n, J. Song, G. Zynda, L. Mickelson-Young n, C. LeBlanc*, T. Lee n, D. Deppong n, G. Allen n ...

MeSH headings : Cell Nucleus / drug effects; Cell Nucleus / genetics; Centromere / drug effects; Centromere / genetics; DNA Replication / drug effects; DNA Replication / genetics; DNA Replication Timing / drug effects; DNA Replication Timing / genetics; DNA, Plant / drug effects; DNA, Plant / genetics; Deoxyuridine / analogs & derivatives; Deoxyuridine / pharmacology; Endocytosis / drug effects; Meristem / drug effects; Meristem / genetics; Mitosis / drug effects; Mitosis / genetics; Nucleosomes / drug effects; Plant Roots / drug effects; Plant Roots / genetics; Plant Roots / growth & development; S Phase / genetics; Zea mays / genetics; Zea mays / growth & development
Sources: Web Of Science, NC State University Libraries
Added: November 9, 2020

2020 journal article

Development of a Genome-Wide Oligonucleotide Microarray Platform for Detection of DNA Copy Number Aberrations in Feline Cancers

VETERINARY SCIENCES, 7(3).

By: R. Thomas n, J. Pontius*, L. Borst n & M. Breen n

author keywords: feline; cat; cancer; genomics; chromosome; comparative genomic hybridization (CGH)
TL;DR: A microarray platform that allows rapid and sensitive detection of DNA copy number aberrations in feline tumors using comparative genomic hybridization analysis is developed and shown to have diverse potential to incorporate domestic cat cancers into comparative and translational research efforts in molecular oncology. (via Semantic Scholar)
Source: Web Of Science
Added: November 9, 2020

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