High-dimensional Integration of Biological Systems

Works Published in 2008

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2008 journal article

Genomewide association for schizophrenia in the CATIE study: results of stage 1

Molecular Psychiatry, 13(6), 570–584.

By: P. Sullivan*, D. Lin*, J. Tzeng n, E. van den Oord*, D. Perkins*, T. Stroup*, M. Wagner*, S. Lee* ...

author keywords: schizophrenia; genomewide association; CATIE
MeSH headings : Antipsychotic Agents / therapeutic use; Case-Control Studies; Computational Biology; DNA / genetics; DNA / isolation & purification; Genetic Markers; Genetic Variation; Genome, Human; Genotype; Humans; National Institute of Mental Health (U.S.); Polymorphism, Single Nucleotide; Schizophrenia / drug therapy; Schizophrenia / genetics; United States
TL;DR: These data do not provide evidence for the involvement of any genomic region with schizophrenia detectable with moderate sample size, however, a planned genomewide association study for response phenotypes and inclusion of individual phenotype and genotype data from this study in meta-analyses hold promise for eventual identification of susceptibility and protective variants. (via Semantic Scholar)
Source: Crossref
Added: August 28, 2020

2008 journal article

Estimating Odds Ratios in Genome Scans: An Approximate Conditional Likelihood Approach

The American Journal of Human Genetics, 82(5), 1224.

By: A. Ghosh, F. Zou & F. Wright*

Source: Crossref
Added: August 28, 2020

2008 journal article

Estimating Odds Ratios in Genome Scans: An Approximate Conditional Likelihood Approach

The American Journal of Human Genetics, 82(5), 1064–1074.

MeSH headings : Genome, Human; Haplotypes; Humans; Likelihood Functions; Models, Genetic; Odds Ratio; Software
TL;DR: This work introduces a method, based on the estimate of genetic effect and its standard error as reported by standard statistical software, to correct for this bias in case-control association studies and develops a principled method to construct confidence intervals for the genetic effect that acknowledges the conditioning on statistical significance. (via Semantic Scholar)
Source: Crossref
Added: August 28, 2020

2008 journal article

Comment on a Simple and Improved Correction for Population Stratification

The American Journal of Human Genetics, 82(2), 524–526.

MeSH headings : Case-Control Studies; Genetic Markers; Genetics, Population; Genotype; Humans; Polymorphism, Single Nucleotide; Regression Analysis; Research Design
TL;DR: To the Editor: In the May 2007 issue of the American Journal of Human Genetics, Epstein, Allen, and Satten1 (hereafter referred to as EAS) introduced a new method for controlling population stratification in case-control association studies. (via Semantic Scholar)
Source: Crossref
Added: August 28, 2020

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