High-dimensional Integration of Biological Systems

Works Published in 2012

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Displaying all 6 works

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2012 journal article

Exome sequencing of extreme phenotypes identifies DCTN4 as a modifier of chronic Pseudomonas aeruginosa infection in cystic fibrosis

Nature Genetics, 44(8), 886–889.

By: M. Emond*, T. Louie*, J. Emerson*, W. Zhao*, R. Mathias*, M. Knowles*, F. Wright*, M. Rieder* ...

MeSH headings : Adolescent; Age of Onset; Child; Child, Preschool; Cystic Fibrosis / complications; Cystic Fibrosis / genetics; Dynactin Complex; Exome; Gene Frequency; Humans; Infant; Infant, Newborn; Linkage Disequilibrium; Microtubule-Associated Proteins / genetics; Phenotype; Polymorphism, Single Nucleotide; Pseudomonas Infections / etiology; Pseudomonas Infections / genetics; Pseudomonas aeruginosa
TL;DR: An extreme phenotype study design is used to discover that variants in DCTN4, encoding a dynactin protein, are associated with time to first P. aeruginosa airway infection, chronic P.aerug inosa infection and mucoid P. AerugInosa in individuals with cystic fibrosis. (via Semantic Scholar)
Source: Crossref
Added: August 28, 2020

2012 journal article

Multiple apical plasma membrane constituents are associated with susceptibility to meconium ileus in individuals with cystic fibrosis

Nature Genetics, 44(5), 562–569.

By: L. Sun*, J. Rommens*, H. Corvol*, W. Li*, X. Li*, T. Chiang*, F. Lin*, R. Dorfman* ...

MeSH headings : Amino Acid Transport Systems; Amino Acid Transport Systems, Neutral / genetics; Antiporters / genetics; Cell Membrane / metabolism; Cystic Fibrosis / genetics; Cystic Fibrosis Transmembrane Conductance Regulator / genetics; Genetic Predisposition to Disease; Genome-Wide Association Study; Genotype; Humans; Ileus / genetics; Intestinal Obstruction / etiology; Meconium; Polymorphism, Single Nucleotide / genetics; Sodium-Hydrogen Exchanger 3; Sodium-Hydrogen Exchangers / genetics; Sulfate Transporters
TL;DR: It is suggested that modulating activities of apical membrane constituents could complement current therapeutic paradigms for cystic fibrosis and provide evidence of association between meconium ileus and multiple genes encoding constituents of the apical plasma membrane where CFTR resides. (via Semantic Scholar)
Source: Crossref
Added: August 28, 2020

2012 journal article

Supplementary material for: Empirical Pathway Analysis, Without Permutation

By: Y. Zhou, W. Barry, F. Wright & C. Hill

Source: ORCID
Added: October 7, 2019

2012 journal article

Simple and accurate trend tests using a permutation approximation

By: Y. Zhou & F. Wright

Source: ORCID
Added: October 7, 2019

2012 journal article

Quantitative high-throughput screening for chemical toxicity in a population-based in vitro model

Toxicological Sciences.

By: E. Lock, N. Abdo, R. Huang, M. Xia, O. Kosyk, S. O’Shea, Y. Zhou, A. Sedykh ...

Source: ORCID
Added: October 7, 2019

2012 journal article

Single Nucleotide Polymorphism (SNP) Detection and Genotype Calling from Massively Parallel Sequencing (MPS) Data

Statistics in Biosciences, 1–23.

By: Y. Li, W. Chen, E. Liu & Y. Zhou

Source: ORCID
Added: October 7, 2019

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