Plant and Microbial Biology

College of Agriculture and Life Sciences

Works Published in 2016

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Displaying works 21 - 40 of 108 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2016 journal article

Genome Sequence of Aeromicrobium erythreum NRRL B-3381, an Erythromycin-Producing Bacterium of the Nocardioidaceae

Genome Announcements, 4(2).

By: E. Harrell n & E. Miller n

Sources: Crossref, ORCID
Added: January 19, 2020

2016 chapter

Climate Change, Microbes, and Soil Carbon Cycling

In Climate Change and Microbial Ecology: Current Research and Future Trends.

Source: ORCID
Added: December 19, 2019

2016 journal article

Plant and root endophyte assembly history: interactive effects on native and exotic plants

Ecology.

author keywords: assembly history; Florida rosemary scrub; fungal root endophytes; invasion; priority effects; restoration
MeSH headings : Endophytes; Fungi / classification; Fungi / physiology; Introduced Species; Plant Roots / microbiology; Plants / classification; Plants / microbiology; Species Specificity; Time Factors
Source: ORCID
Added: December 19, 2019

2016 journal article

Intraspecific variation in precipitation responses of a widespread C4grass depends on site water limitation

Journal of Plant Ecology.

author keywords: climate change; Panicum virgatum; phenology; phenotypic plasticity; precipitation
Source: ORCID
Added: December 19, 2019

2016 journal article

Historical and current climate drive spatial and temporal patterns in fungal endophyte diversity

Fungal Ecology.

author keywords: Ascomycota; Environmental filtering; Rainfall; Species sorting; Temperature; Warm-season grass
Source: ORCID
Added: December 19, 2019

2016 journal article

Tree species, spatial heterogeneity, and seasonality drive soil fungal abundance, richness, and composition in Neotropical rainforests

Environmental Microbiology.

MeSH headings : Ecosystem; Fungi; Rainforest; Seasons; Soil / chemistry; Soil Microbiology; Trees / microbiology; Trees / physiology; Tropical Climate
Source: ORCID
Added: December 19, 2019

2016 journal article

Temporal and Spatial Variation of Soil Bacteria Richness, Composition, and Function in a Neotropical Rainforest

PLOS ONE.

MeSH headings : Bacteria / classification; Bacteria / genetics; Biodiversity; Forests; Phylogeny; Rainforest; Soil Microbiology
Source: ORCID
Added: December 19, 2019

2016 journal article

Promises and challenges of eco-physiological genomics in the field: tests of drought responses in switchgrass

Plant Physiology.

MeSH headings : Adaptation, Physiological / genetics; Droughts; Ecosystem; Gene Expression Profiling / methods; Gene Expression Regulation, Plant; Genomics / methods; Panicum / genetics; Photosynthesis / genetics; Plant Leaves / genetics; Principal Component Analysis; Soil / chemistry; Stress, Physiological; Water / metabolism
Source: ORCID
Added: December 19, 2019

2016 journal article

Historical precipitation predictably alters the shape and magnitude of microbial functional response to soil moisture

Global Change Biology.

author keywords: climate change; historical contingency; microbes; precipitation; soil enzymes; soil moisture
MeSH headings : Carbon / analysis; Climate; Rain; Seasons; Soil / chemistry; Soil Microbiology; Texas
Source: ORCID
Added: December 19, 2019

2016 journal article

Ectomycorrhizal fungi slow soil carbon cycling

Ecology Letters.

author keywords: Biogeochemistry; ecosystem ecology; mycorrhizal fungi; soil carbon; soil ecology; soil nitrogen
MeSH headings : Biomass; Carbon / chemistry; Carbon Cycle / physiology; Enzymes / metabolism; Forests; Fungi / metabolism; Mycorrhizae; Soil / chemistry; Tsuga / microbiology
Source: ORCID
Added: December 19, 2019

2016 journal article

Simulating diverse native C4 perennial grasses with varying rainfall

Journal of Arid Environments.

author keywords: Forage; Rainfall; ALMANAC; Plant growth; Perennial grass
Source: ORCID
Added: December 19, 2019

2016 journal article

Epigenetics: A tug of war for DNA methylation.

Nature Plants.

MeSH headings : DNA; DNA Methylation; DNA Mismatch Repair; DNA Modification Methylases / genetics; DNA Replication; Epigenesis, Genetic; Epigenomics; Humans; Methylation; Warfare
Source: ORCID
Added: September 13, 2019

2016 journal article

Guide to the littoral zone vascular flora of Carolina bay lakes (U.S.A.)

Biodiversity Data Journal, 4, e7964–1.

By: A. Krings*, N. Howell & R. Braham

author keywords: North American southeastern Coastal Plain lakes; oristics; aquatic; emersed vegetation
Source: Crossref
Added: July 28, 2019

2016 book

Guide to the vascular flora of Kitty Hawk Woods (Dare County, North Carolina, U.S.A.)

Fort Worth, Texas: Botanical Research Institute of Texas Press.

By: R. Clark, A. Krings, J. Stucky & H. Kleiss

Source: NC State University Libraries
Added: July 10, 2019

2016 journal article

Quantitative proteomic analysis of Araucaria angustifolia (Bertol.) Kuntze cell lines with contrasting embryogenic potential

Journal of Proteomics, 130, 180–189.

author keywords: Quantitative proteomics; Somatic embryogenesis; Conifer; Embryogenic potential; Molecular markers
MeSH headings : Carbohydrate Metabolism; Carbohydrates / chemistry; Databases, Protein; Electrophoresis, Gel, Two-Dimensional; Gene Expression Regulation; Genotype; Plant Proteins / metabolism; Plant Somatic Embryogenesis Techniques; Proteome / metabolism; Proteomics / methods; RNA / chemistry; Reactive Oxygen Species / metabolism; Seeds / metabolism; Sequence Analysis, RNA; Tandem Mass Spectrometry; Tracheophyta / metabolism; Trypsin / chemistry
Source: ORCID
Added: June 21, 2019

2016 journal article

Proteomic response of the phytopathogen Phyllosticta citricarpa to antimicrobial volatile organic compounds from Saccharomyces cerevisiae

Microbiological Research.

author keywords: Antifungal; Citrus; Guignardia; Mechanism of action; Postharvest; Volatiles
MeSH headings : Amino Acids / metabolism; Anti-Infective Agents / pharmacology; Antifungal Agents / chemistry; Antifungal Agents / metabolism; Antifungal Agents / pharmacology; Ascomycota / drug effects; Ascomycota / genetics; Ascomycota / metabolism; Citric Acid Cycle / drug effects; Citrus / microbiology; Electrophoresis, Gel, Two-Dimensional; Fungal Proteins / drug effects; Fungal Proteins / isolation & purification; Fungal Proteins / metabolism; Glycolysis / drug effects; Nucleotides / metabolism; Plant Diseases / microbiology; Proteomics; Proton-Translocating ATPases / metabolism; Saccharomyces cerevisiae / chemistry; Tandem Mass Spectrometry; Volatile Organic Compounds / chemistry; Volatile Organic Compounds / metabolism; Volatile Organic Compounds / pharmacology
Source: ORCID
Added: June 21, 2019

2016 journal article

Ecological genomics of local adaptation in Cornus florida L. by genotyping by sequencing

Ecology and Evolution, 7(1), 441–465.

By: A. Pais n, R. Whetten n & Q. Xiang n

author keywords: Cornus florida; genotyping by sequencing; local adaptation; single nucleotide polymorphisms
Sources: ORCID, Crossref
Added: May 17, 2019

2016 journal article

High purity galacto-oligosaccharides enhance specific Bifidobacterium species and their metabolic activity in the mouse gut microbiome.

Beneficial Microbes, 7(2), 247–264.

author keywords: mouse gut microbiome; prebiotics; Bifidobacterium
MeSH headings : Animals; Bacteria / classification; Bacteria / genetics; Bacteria / isolation & purification; Bifidobacterium / genetics; Bifidobacterium / isolation & purification; Bifidobacterium / physiology; Female; Fermentation; Galactose / metabolism; Gastrointestinal Microbiome; Gastrointestinal Tract / metabolism; Gastrointestinal Tract / microbiology; Interleukin-12 / genetics; Interleukin-12 / metabolism; Interleukin-6 / genetics; Interleukin-6 / metabolism; Male; Mice; Mice, 129 Strain; Oligosaccharides / administration & dosage; Oligosaccharides / analysis; Oligosaccharides / metabolism; Prebiotics / administration & dosage; Prebiotics / analysis
Source: ORCID
Added: March 4, 2019

2016 chapter

Isolation of Plant Nuclei at Defined Cell Cycle Stages Using EdU Labeling and Flow Cytometry

In Methods in Molecular Biology (pp. 69–86).

By: E. Wear n, L. Concia n, A. Brooks n, E. Markham n, T. Lee n, G. Allen n, W. Thompson n, L. Hanley-Bowdoin n

author keywords: 5-Ethynyl-2 '-deoxyuridine; Flow cytometry; Nuclei sorting; Arabidopsis; Maize; Percoll gradient; Cell cycle; DNA replication; Chromatin
MeSH headings : Arabidopsis / cytology; Arabidopsis / genetics; Cell Cycle; Cell Fractionation / methods; Cell Nucleus / genetics; Click Chemistry / methods; DNA Replication; DNA, Plant / analysis; DNA, Plant / genetics; Deoxyuridine / analogs & derivatives; Deoxyuridine / analysis; Flow Cytometry / methods; Fluorescent Dyes / analysis; Zea mays / cytology; Zea mays / genetics
Sources: Crossref, ORCID
Added: February 14, 2019

2016 dataset

Transcriptomic and proteomic insights into innate immunity and adaptations to a symbiotic lifestyle in the gutless marine worm Olavius algarvensis

https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=77bbe652de0b4439b9a9e89016f99c93

Source: ORCID
Added: February 3, 2019