Works Published in 2016
Displaying works 21 - 40 of 110 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2016 journal article
Characterization of Clostridium ljungdahlii OTA1: a non-autotrophic hyper ethanol-producing strain
Applied Microbiology and Biotechnology, 101(4), 1615–1630.
author keywords: Acetyl-coA; Carbon monoxide dehydrogenase; Clostridium ljungdahlii; Ethanol; Wood-Ljungdahl pathway
MeSH headings : Acetyl Coenzyme A / metabolism; Aldehyde Oxidoreductases / metabolism; Carbon Dioxide / metabolism; Carbon Monoxide / metabolism; Clostridium / metabolism; Ethanol / metabolism; Multienzyme Complexes / metabolism
TL;DR:
A non-autotrophic hyper ethanol-producing strain of C. ljungdahlii was identified that has utility for further physiology and strain performance studies and as a biocatalyst for industrial applications.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
12. Responsible Consumption and Production
(Web of Science)
Sources: Crossref, NC State University Libraries
Added: January 25, 2020
2016 journal article
Paenibacillus larvae Phage Tripp Genome Has 378-Base-Pair Terminal Repeats
Genome Announcements, 4(1).
TL;DR:
Paenibacillus larvae bacteriophage Tripp was isolated from an American foulbrood diseased honey bee hive in North Carolina, USA and is currently unique in Genbank.
(via Semantic Scholar)
mra.asm.org (publisher PDF)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020
2016 journal article
Genome Sequence of Aeromicrobium erythreum NRRL B-3381, an Erythromycin-Producing Bacterium of the Nocardioidaceae
Genome Announcements, 4(2).
TL;DR:
Aeromicrobium erythreum NRRL B-3381 has a 3,629,239-bp circular genome that has 72% G+C content and provides resources for metabolic and combinatorial engineering of polyketides.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020
2016 chapter
Climate Change, Microbes, and Soil Carbon Cycling
In Climate Change and Microbial Ecology: Current Research and Future Trends.
UN Sustainable Development Goal Categories
13. Climate Action
(OpenAlex)
Source: ORCID
Added: December 19, 2019
2016 journal article
Plant and root endophyte assembly history: interactive effects on native and exotic plants
Ecology.
author keywords: assembly history; Florida rosemary scrub; fungal root endophytes; invasion; priority effects; restoration
MeSH headings : Endophytes; Fungi / classification; Fungi / physiology; Introduced Species; Plant Roots / microbiology; Plants / classification; Plants / microbiology; Species Specificity; Time Factors
TL;DR:
Early introduction of a different plant species or fungi from a different site type eliminated negative effects of the exotic Melinis repens and the native Schizacharyium niveum, providing evidence for interactive priority effects.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Source: ORCID
Added: December 19, 2019
2016 journal article
Intraspecific variation in precipitation responses of a widespread C4grass depends on site water limitation
Journal of Plant Ecology.
author keywords: climate change; Panicum virgatum; phenology; phenotypic plasticity; precipitation
TL;DR:
Variation in genotype ANPP plasticity was explained primarily by variation in tiller and leaf growth, and was not associated with temperature or aridity at the genotype’s origin.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2016 journal article
Historical and current climate drive spatial and temporal patterns in fungal endophyte diversity
Fungal Ecology.
author keywords: Ascomycota; Environmental filtering; Rainfall; Species sorting; Temperature; Warm-season grass
TL;DR:
The importance of historical climate and annual weather in endophyte distributions suggests that species sort by environment and are likely to be affected by future climate change.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(OpenAlex)
Source: ORCID
Added: December 19, 2019
2016 journal article
Tree species, spatial heterogeneity, and seasonality drive soil fungal abundance, richness, and composition in Neotropical rainforests
Environmental Microbiology.
MeSH headings : Ecosystem; Fungi; Rainforest; Seasons; Soil / chemistry; Soil Microbiology; Trees / microbiology; Trees / physiology; Tropical Climate
TL;DR:
The combined effects of tree species and seasonality suggest that predicted losses of tropical tree diversity and intensification of drought have the potential to cascade belowground to affect both diversity and abundance of tropical soil fungi.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2016 journal article
Temporal and Spatial Variation of Soil Bacteria Richness, Composition, and Function in a Neotropical Rainforest
PLOS ONE.
MeSH headings : Bacteria / classification; Bacteria / genetics; Biodiversity; Forests; Phylogeny; Rainforest; Soil Microbiology
TL;DR:
Understanding of tropical soil bacteria will benefit from additional work to determine the optimal temporal and spatial scales for sampling, as it will facilitate prediction of how tropical soil microbes will respond to future environmental change.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2016 journal article
Promises and challenges of eco-physiological genomics in the field: tests of drought responses in switchgrass
Plant Physiology.
MeSH headings : Adaptation, Physiological / genetics; Droughts; Ecosystem; Gene Expression Profiling / methods; Gene Expression Regulation, Plant; Genomics / methods; Panicum / genetics; Photosynthesis / genetics; Plant Leaves / genetics; Principal Component Analysis; Soil / chemistry; Stress, Physiological; Water / metabolism
TL;DR:
The strong across-experiment correlations between physiological plasticity—but not differential gene expression—highlight the complex and diverse genetic mechanisms that can produce phenotypically similar responses to various soil water deficits.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2016 journal article
Historical precipitation predictably alters the shape and magnitude of microbial functional response to soil moisture
Global Change Biology.
author keywords: climate change; historical contingency; microbes; precipitation; soil enzymes; soil moisture
MeSH headings : Carbon / analysis; Climate; Rain; Seasons; Soil / chemistry; Soil Microbiology; Texas
TL;DR:
It is suggested that variation in the shape and magnitude of soil microbial response to soil moisture due to historical climate may be remarkably predictable at regional scales, and this approach may extend to other systems.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(OpenAlex)
Source: ORCID
Added: December 19, 2019
2016 journal article
Ectomycorrhizal fungi slow soil carbon cycling
Ecology Letters.
author keywords: Biogeochemistry; ecosystem ecology; mycorrhizal fungi; soil carbon; soil ecology; soil nitrogen
MeSH headings : Biomass; Carbon / chemistry; Carbon Cycle / physiology; Enzymes / metabolism; Forests; Fungi / metabolism; Mycorrhizae; Soil / chemistry; Tsuga / microbiology
TL;DR:
It is shown that ectomycorrhizal roots and hyphae decrease soil carbon respiration rates by up to 67% under field conditions in two separate field exclusion experiments, which likely occurs via competition for soil nitrogen, an effect larger than 2 °C soil warming.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2016 journal article
Simulating diverse native C4 perennial grasses with varying rainfall
Journal of Arid Environments.
author keywords: Forage; Rainfall; ALMANAC; Plant growth; Perennial grass
Source: ORCID
Added: December 19, 2019
2016 journal article
Epigenetics: A tug of war for DNA methylation.
Nature Plants.
MeSH headings : DNA; DNA Methylation; DNA Mismatch Repair; DNA Modification Methylases / genetics; DNA Replication; Epigenesis, Genetic; Epigenomics; Humans; Methylation; Warfare
TL;DR:
Thousands of RNA-directed DNA methylation target sites masked by the active removal of methylated cytosines by a demethylating enzyme are uncovered.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: ORCID
Added: September 13, 2019
2016 journal article
Guide to the littoral zone vascular flora of Carolina bay lakes (U.S.A.)
Biodiversity Data Journal, 4, e7964–1.
author keywords: North American southeastern Coastal Plain lakes; oristics; aquatic; emersed vegetation
TL;DR:
A guide to the littoral zone flora of Carolina bay lakes is presented herein, including dichotomous keys, species accounts (including abundance, habitat, phenology, and exsiccatae), as well as images of living species and vouchered specimens.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation
(Web of Science)
13. Climate Action
(Web of Science)
14. Life Below Water
(OpenAlex)
15. Life on Land
(Web of Science)
Source: Crossref
Added: July 28, 2019
2016 book
Guide to the vascular flora of Kitty Hawk Woods (Dare County, North Carolina, U.S.A.)
Fort Worth, Texas: Botanical Research Institute of Texas Press.
Source: NC State University Libraries
Added: July 10, 2019
2016 journal article
Quantitative proteomic analysis of Araucaria angustifolia (Bertol.) Kuntze cell lines with contrasting embryogenic potential
Journal of Proteomics, 130, 180–189.
Contributors: A. Santos*, P. Elbl*, B. Navarro *, L. Oliveira *, F. Salvato* , T. Balbuena *, E. Floh *
author keywords: Quantitative proteomics; Somatic embryogenesis; Conifer; Embryogenic potential; Molecular markers
MeSH headings : Carbohydrate Metabolism; Carbohydrates / chemistry; Databases, Protein; Electrophoresis, Gel, Two-Dimensional; Gene Expression Regulation; Genotype; Plant Proteins / metabolism; Plant Somatic Embryogenesis Techniques; Proteome / metabolism; Proteomics / methods; RNA / chemistry; Reactive Oxygen Species / metabolism; Seeds / metabolism; Sequence Analysis, RNA; Tandem Mass Spectrometry; Tracheophyta / metabolism; Trypsin / chemistry
TL;DR:
Differences in protein abundance between the EC lines are discussed in terms of carbohydrate metabolism, cell division, defense response, gene expression, and response to reactive oxygen species.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Source: ORCID
Added: June 21, 2019
2016 journal article
Proteomic response of the phytopathogen Phyllosticta citricarpa to antimicrobial volatile organic compounds from Saccharomyces cerevisiae
Microbiological Research.
author keywords: Antifungal; Citrus; Guignardia; Mechanism of action; Postharvest; Volatiles
MeSH headings : Amino Acids / metabolism; Anti-Infective Agents / pharmacology; Antifungal Agents / chemistry; Antifungal Agents / metabolism; Antifungal Agents / pharmacology; Ascomycota / drug effects; Ascomycota / genetics; Ascomycota / metabolism; Citric Acid Cycle / drug effects; Citrus / microbiology; Electrophoresis, Gel, Two-Dimensional; Fungal Proteins / drug effects; Fungal Proteins / isolation & purification; Fungal Proteins / metabolism; Glycolysis / drug effects; Nucleotides / metabolism; Plant Diseases / microbiology; Proteomics; Proton-Translocating ATPases / metabolism; Saccharomyces cerevisiae / chemistry; Tandem Mass Spectrometry; Volatile Organic Compounds / chemistry; Volatile Organic Compounds / metabolism; Volatile Organic Compounds / pharmacology
TL;DR:
The data indicate that antimicrobial VOCs interfere with essential metabolic pathways in P. citricarpa to prevent fungal growth, and proteins involved in metabolism, genetic information processing, cellular processes, and transport were the most strongly affected.
(via Semantic Scholar)
Source: ORCID
Added: June 21, 2019
2016 journal article
Ecological genomics of local adaptation in Cornus florida L. by genotyping by sequencing
Ecology and Evolution, 7(1), 441–465.
author keywords: Cornus florida; genotyping by sequencing; local adaptation; single nucleotide polymorphisms
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
15. Life on Land
(Web of Science)
Sources: NC State University Libraries, Crossref
Added: May 17, 2019
2016 journal article
High purity galacto-oligosaccharides enhance specific Bifidobacterium species and their metabolic activity in the mouse gut microbiome.
Beneficial Microbes, 7(2), 247–264.
Contributors: A. Monteagudo-Mera*, J. Arthur *, C. Jobin *, T. Keku *, J. Bruno-Barcena* & M. Azcarate-Peril*
author keywords: mouse gut microbiome; prebiotics; Bifidobacterium
MeSH headings : Animals; Bacteria / classification; Bacteria / genetics; Bacteria / isolation & purification; Bifidobacterium / genetics; Bifidobacterium / isolation & purification; Bifidobacterium / physiology; Female; Fermentation; Galactose / metabolism; Gastrointestinal Microbiome; Gastrointestinal Tract / metabolism; Gastrointestinal Tract / microbiology; Interleukin-12 / genetics; Interleukin-12 / metabolism; Interleukin-6 / genetics; Interleukin-6 / metabolism; Male; Mice; Mice, 129 Strain; Oligosaccharides / administration & dosage; Oligosaccharides / analysis; Oligosaccharides / metabolism; Prebiotics / administration & dosage; Prebiotics / analysis
TL;DR:
The results demonstrate that GOS90 is capable of modulating the intestinal microbiome resulting in expansion of the probiome and decreased butyrate, acetate and lactate concentrations in stools of prebiotic fed mice suggested an increase in colonic absorption and reduced excretion.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: ORCID
Added: March 4, 2019
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