Works Published in 2014

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Displaying works 1 - 20 of 85 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2014 journal article

Response of a paddy soil methanogen to syntrophic growth as revealed by transcriptional analyses

Applied and Environmental Microbiology, 5.

By: P. Liu*, Y. Yang*, Z. Lu* & Y. Lu*

MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Euryarchaeota / enzymology; Euryarchaeota / genetics; Euryarchaeota / growth & development; Euryarchaeota / isolation & purification; Formate Dehydrogenases / genetics; Formate Dehydrogenases / metabolism; Hydrogenase / genetics; Hydrogenase / metabolism; Methane / metabolism; Oryza / growth & development; Oxidoreductases / genetics; Oxidoreductases / metabolism; Soil / chemistry; Soil Microbiology; Transcription, Genetic
TL;DR: It is proposed that Methanocella methanogens cope with low H2 and syntrophic growth by stabilizing the Mvh/Hdr/Fwd complex and activating formate-dependent methanogenesis. (via Semantic Scholar)
Source: ORCID
Added: August 16, 2023

2014 conference paper

Engineering Cercospora disease-resistant plants using fungal resistance genes

Presented at the 13th Annual NC State University Summer Undergraduate Research Symposium, Raleigh, NC.

By: A. Baumgardner, E. Thomas & M. Daub

Event: 13th Annual NC State University Summer Undergraduate Research Symposium at Raleigh, NC

Source: NC State University Libraries
Added: May 21, 2022

2014 journal article

Draft Genome Sequence of the Plant-Pathogenic Soil Fungus Rhizoctonia solani Anastomosis Group 3 Strain Rhs1AP

Genome Announcements, 2(5).

By: M. Cubeta n, E. Thomas n, R. Dean n, S. Jabaji*, S. Neate, S. Tavantzis*, T. Toda*, R. Vilgalys* ...

TL;DR: This work reports on the 51,705,945 bp draft consensus genome sequence of R. solani strain Rhs1AP, a pathogen of agricultural crops that may provide insight into the plant disease ecology and adaptive behavior of the fungus. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
Sources: Crossref, ORCID
Added: February 5, 2022

2014 journal article

The Arabidopsis 14-3-3 Protein RARE COLD INDUCIBLE 1A Links Low-Temperature Response and Ethylene Biosynthesis to Regulate Freezing Tolerance and Cold Acclimation  

The Plant Cell, 26(8), 3326–3342.

MeSH headings : 14-3-3 Proteins / genetics; 14-3-3 Proteins / metabolism; 14-3-3 Proteins / physiology; Acclimatization / genetics; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Arabidopsis Proteins / physiology; Cold Temperature; Freezing; Gene Expression Regulation, Plant; Stress, Physiological
TL;DR: The results demonstrate that RCI1A functions as a negative regulator of constitutive freezing tolerance and cold acclimation in Arabidopsis thaliana by controlling cold-induced gene expression and shows that these levels are required to promote proper cold- induced geneexpression and freezing tolerance before and after cold Acclimation. (via Semantic Scholar)
Sources: Crossref, ORCID
Added: October 9, 2021

2014 journal article

Trade-Offs between Constitutive and Induced Defences Drive Geographical and Climatic Clines in Pine Chemical Defences

Ecology Letters, 17(5), 537–546.

Will Petry

author keywords: latitude; salicylic acid; temperature; precipitation; jasmonic acid; Altitude; growth rate; non-volatile resin; Pinus; total phenolics
MeSH headings : Climate; Pinaceae / chemistry; Pinaceae / growth & development; Pinaceae / physiology
TL;DR: This work quantified early growth rate and both constitutive and inducible chemical defences of 18 Pinaceae species in a common greenhouse environment and assessed their defensive allocation with respect to each species' range across climatic gradients. (via Semantic Scholar)
Source: ORCID
Added: March 4, 2021

2014 journal article

Exploiting Natural Variation of Secondary Metabolism Identifies a Gene Controlling the Glycosylation Diversity of Dihydroxybenzoic Acids in Arabidopsis thaliana

Genetics, 198(3), 1267–1276.

By: X. Li*, E. Svedin*, H. Mo*, S. Atwell*, B. Dilkes* & C. Chapple*

MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Chromatography, High Pressure Liquid; Genes, Plant; Genetic Variation; Gentisates / chemistry; Gentisates / metabolism; Glycosides / metabolism; Glycosylation; Hydrolysis; Hydroxybenzoates / chemistry; Hydroxybenzoates / metabolism; Pentosyltransferases / metabolism; Plant Leaves / metabolism; Quantitative Trait Loci / genetics; Secondary Metabolism / genetics
TL;DR: This study demonstrates that exploiting natural variation of secondary metabolism is a powerful approach for gene function discovery in plant secondary metabolism. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: Crossref, ORCID
Added: January 24, 2021

2014 book

Messages from the Gods: A Guide to the Useful Plants of Belize

(J. M. De Gezelle, Ed.). New York: Oxford University Press/The New York Botanical Garden.

By: M. Balick & R. Arvigo

Ed(s): J. De Gezelle

Source: NC State University Libraries
Added: December 29, 2020

2014 journal article

Biosynthesis and Metabolic Engineering of Anthocyanins in Arabidopsis thaliana

Recent Patents on Biotechnology, 8(1), 47–60.

By: M. Shi n & D. Xie n

MeSH headings : Anthocyanins / biosynthesis; Anthocyanins / chemistry; Arabidopsis / chemistry; Arabidopsis / metabolism; Gene Expression Regulation, Plant; Glycosyltransferases / genetics; Glycosyltransferases / metabolism; Metabolic Engineering; Patents as Topic; Plants, Genetically Modified / metabolism
TL;DR: Current progresses and findings including structural diversity, regulatory properties and metabolic engineering of anthocyanins in Arabidopsis thaliana are discussed. (via Semantic Scholar)
Sources: Crossref, ORCID
Added: September 13, 2020

2014 journal article

Complete Genome Sequence of Solvent-Tolerant Clostridium beijerinckii Strain SA-1

Microbiology Resource Announcements.

Contributors: J. Noar, S. Makwana & J. Bruno-Barcena

Source: ORCID
Added: May 4, 2020

2014 journal article

Making Heads or Tails: Planarian Stem Cells in the Classroom †

Journal of Microbiology & Biology Education, 15(1), 18–25.

By: M. Srougi n, S. Carson n, J. Thomas-Swanik*, J. Marchant* & J. Chan*

TL;DR: A hands-on introductory laboratory module that introduces students to stem cell biology and can be easily incorporated into existing curricula is developed and implemented and piloted at the high school, community college, and university levels. (via Semantic Scholar)
UN Sustainable Development Goal Categories
4. Quality Education (OpenAlex)
14. Life Below Water (Web of Science)
Sources: Crossref, ORCID
Added: January 19, 2020

2014 journal article

Do phosphoinositides regulate membrane water permeability of tobacco protoplasts by enhancing the aquaporin pathway?

Planta, 241(3), 741–755.

By: X. Ma*, A. Shatil-Cohen*, S. Ben-Dor*, N. Wigoda*, I. Perera n, Y. Im n, S. Diminshtein*, L. Yu* ...

author keywords: BY2; Lipid; Osmotic water permeability coefficient; P-f; Signaling; Synthetic-biology
MeSH headings : Aquaporins / metabolism; Cell Membrane Permeability; Cells, Cultured; Cytosol / metabolism; Hydrogen-Ion Concentration; Phosphatidylinositols / metabolism; Protoplasts; Tobacco; Water / metabolism
TL;DR: Three results demonstrate the differences between the PIPK cells and their controls, and suggest a hitherto unobserved regulation of aquaporins by phosphoinositides, which could occur through direct interaction or indirect phosphoinosis-dependent cellular effects. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Crossref
Added: January 19, 2020

2014 conference paper

Modeling ribosome dynamics to optimize heterologous protein production in escherichia coli

2014 IEEE Global Conference on Signal and Information Processing (GlobalSIP). Presented at the 2014 IEEE Global Conference on Signal and Information Processing (GlobalSIP).

By: S. Vu n, A. Belloti n, C. Gabriel n, H. Brochu n, E. Miller n, D. Bitzer n, M. Vouk n

Event: 2014 IEEE Global Conference on Signal and Information Processing (GlobalSIP)

TL;DR: A free-energy based model of translation elongation to predict and optimize genes for expression in E. coli is presented and protein yield of optimized genes showed increase from their wildtype levels. (via Semantic Scholar)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy (OpenAlex)
Sources: Crossref, ORCID
Added: January 7, 2020

2014 book

Arabidopsis transformation with large bacterial artificial chromosomes

In Methods in Molecular Biology (Vol. 1062, pp. 271–283).

Contributors: J. Alonso n & A. Stepanova n

MeSH headings : Agrobacterium / genetics; Arabidopsis / genetics; Base Sequence; Chromosomes, Artificial, Bacterial / genetics; DNA Primers / genetics; DNA, Bacterial / genetics; Escherichia coli; Genome, Plant; Plants, Genetically Modified / genetics; Polymerase Chain Reaction; Transformation, Genetic
TL;DR: This chapter describes the experimental procedures and extra cautionary measures involved in the identification of the clone containing the gene of interest, its transfer from E. coli to Agrobacterium, and the generation, verification, and analysis of the corresponding transgenic plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2014 chapter

A recombineering-based gene tagging system for Arabidopsis

In Bacterial Artificial Chromosomes: Second Edition (pp. 233–243).

Contributors: J. Alonso n & A. Stepanova n

author keywords: Recombineering; Arabidopsis; Fluorescent protein; Lambda RED
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Bacteriophage lambda / genetics; Bacteriophage lambda / metabolism; Chromosomes, Artificial, Bacterial / chemistry; Chromosomes, Artificial, Bacterial / metabolism; Cloning, Molecular; Electroporation; Escherichia coli / genetics; Escherichia coli / metabolism; Genetic Engineering / methods; Genetic Vectors / chemistry; Genetic Vectors / metabolism; Homologous Recombination; Mutagenesis
TL;DR: In this chapter, the experimental procedures involved in recombineering-based tagging of an Arabidopsis gene contained in a plant transformation-ready bacterial artificial chromosome (TAC) are described. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: ORCID
Added: December 19, 2019

2014 chapter

Arabidopsis Transformation with Large Bacterial Artificial Chromosomes

In Arabidopsis Protocols (pp. 271–283).

By: J. Alonso & A. Stepanova

Contributors: J. Alonso & A. Stepanova

Source: ORCID
Added: December 19, 2019

2014 journal article

Resilience in ecology: Abstraction, distraction, or where the action is?

Biological Conservation, 177, 43–51.

author keywords: Biodiversity conservation; Ecological resilience; Environmental policy; Recovery; Restoration goals; Threshold
TL;DR: It is argued that thresholds of disturbance are central to measuring resilience and linking thresholds to functional diversity indices may improve the ability to predict the resilience of ecosystems to future, potentially novel, disturbances according to their spatial and temporal scales of influence. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2014 journal article

Short-Term Precipitation Exclusion Alters Microbial Responses to Soil Moisture in a Wet Tropical Forest

Microb Ecol, 69(4), 843–854.

MeSH headings : Biota; Costa Rica; Rain; Rainforest; Soil / chemistry; Soil Microbiology
TL;DR: Functional patterns suggest that changes in microbial physiology may drive positive feedbacks to rising atmospheric CO2 concentrations if wet tropical forests experience longer or more intense dry seasons in the future. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2014 journal article

Environmental Controls on Fungal Community Composition and Abundance Over 3 Years in Native and Degraded Shrublands

Microb Ecol, 68(4), 807–817.

By: C. Glinka* & C. Hawkes*

MeSH headings : Biodiversity; Environment; Florida; Fungal Proteins / genetics; Fungi / genetics; Fungi / physiology; Molecular Sequence Data; Plants / microbiology; Polymorphism, Restriction Fragment Length; Sequence Analysis, DNA; Soil / chemistry; Soil Microbiology
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2014 journal article

Guide to the Vascular Flora of the Savannas and Flatwoods of Shaken Creek Preserve and Vicinity (Pender & Onslow Counties, North Carolina, U.S.A.)

Guide to the Vascular Flora of the Savannas and Flatwoods of Shaken Creek Preserve and Vicinity (Pender & Onslow Counties, North Carolina, U.S.A.). Biodiversity Data Journal, 2, e1099.

By: R. Thornhill n, A. Krings n, D. Lindbo n & J. Stucky n

TL;DR: This study Inventory the vascular flora of the savannas, flatwoods, and sandhill community types on site through the collection of voucher specimens and provide a comprehensive checklist of the flora based on collections and reports made from the site and from the same or similar habitats in the vicinity; and create an illustrated guide based on the checklist. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: Crossref
Added: July 28, 2019

2014 book

Q’eqchi’ Maya Reproductive Ethnomedicine

In SpringerBriefs in Plant Science.

Source: Crossref
Added: July 27, 2019

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