Works Published in 2011

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Displaying works 1 - 20 of 58 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2011 conference paper

Sequencing and assembling the mitochondrial DNA genome of the soil fungus Rhizoctonia solani

Proceedings of the 26th Fungal Genetics Conference. Presented at the 26th Fungal Genetics Conference, Asilomar, CA.

By: S. Pakala, E. Thomas, M. Rodriguez-Carres, R. Dean, D. Schwartz, S. Zhou, R. Vilgalys, V. Joardar ...

Event: 26th Fungal Genetics Conference at Asilomar, CA

Source: NC State University Libraries
Added: May 21, 2022

2011 journal article

Some Effects of Abiotic Stress on Infection of Dyer's Woad (<i>Isatis tinctoria L.</i>) by <i>Puccinia thlaspeos</i> C. Schub.: Implications for Biological Control

American Journal of Agricultural and Biological Sciences, 6(1), 45–51.

By: E. Thomas* & B. Thropp

TL;DR: Mild abiotic stress appears to enable dyer’s woad plants to develop cross-tolerance to the rust pathogen, which is a cause for concern in biocontrol of weeds because of its potential to adversely impact the efficacy of mycoherbicides. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: February 5, 2022

2011 journal article

Suppression of Salicylic Acid-Mediated Plant Defense Responses During Initial Infection of Dyer's Woad by Puccinia thlaspeos

American Journal of Agricultural and Biological Sciences, 6(3), 307–316.

By: B. Kropp & E. Thomas*

TL;DR: It appears to be insufficient to inhibit fungal growth during the compatible interaction between dyer’s woad and the rust pathogen, and suppression of pathogeninduced host defense responses during and after haustorium formation is postulated to be vital in the establishment of biotrophy in this system. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: February 5, 2022

2011 journal article

Matelea pakaraimensis (Apocynaceae, Asclepiadoideae), a new species in the Matelea stenopetala complex from Guyana

Journal of the Botanical Research Institute of Texas, 5(1), 101–104.

By: A. Krings

Source: NC State University Libraries
Added: August 14, 2021

2011 journal article

Pistacia chinensis (Anacardiaceae) naturalized in North Carolina, U.S.A

Journal of the Botanical Research Institute of Texas, 5(2), 867–869.

By: A. Krings

Source: NC State University Libraries
Added: August 14, 2021

2011 journal article

Synopsis of Matelea s.l. (Apocynaceae, Asclepiadoideae) in Trinidad, Tobago, and the ABC Islands

Journal of the Botanical Research Institute of Texas, 5(2), 475–483.

By: A. Krings

Source: NC State University Libraries
Added: August 14, 2021

2011 journal article

CARACTERÍSTICAS MORFOLÓGICAS Y QUÍMICAS DE 3 CULTIVARES DE MAÍZ MORADO (Zea mays L.) EN AREQUIPA-PERÚ

Revista De La Sociedad Química Del Perú. https://www.redalyc.org/articulo.oa?id=371937623006

Contributors: F. Jacobo, K. Condorena & A. Gutiérrez

Source: ORCID
Added: July 11, 2021

2011 journal article

Validation of the H2S method to detect bacteria of fecal origin by cultured and molecular methods

Applied Microbiology and Biotechnology, 92(6), 1287–1295.

By: L. McMahan*, A. Devine*, A. Grunden n & M. Sobsey*

author keywords: H2S test; TRFLP; Microbial water quality
MeSH headings : Amplified Fragment Length Polymorphism Analysis / methods; Bacteria / chemistry; Bacteria / genetics; Bacteria / isolation & purification; Bacteria / metabolism; Biochemistry / methods; Feces / microbiology; Hydrogen Sulfide / analysis; Hydrogen Sulfide / metabolism; Polymorphism, Restriction Fragment Length; Water Microbiology; Water Pollution / analysis
TL;DR: This research determined whether or not the H2S test did correctly identify sewage-contaminated waters by being the first to use culturing and molecular methods to identify the types and numbers of fecal indicator organisms, pathogens, and other microbes present in sewage samples with positive H1N1 test results. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Crossref, ORCID
Added: September 8, 2020

2011 journal article

Complex genetic architecture of Drosophila aggressive behavior

Proceedings of the National Academy of Sciences, 108(41), 17070–17075.

By: L. Zwarts*, M. Magwire*, M. Carbone*, M. Versteven*, L. Herteleer*, R. Anholt n, P. Callaerts*, T. Mackay*

MeSH headings : Aggression / physiology; Animals; Behavior, Animal / physiology; Brain / anatomy & histology; Crosses, Genetic; Drosophila melanogaster / anatomy & histology; Drosophila melanogaster / genetics; Drosophila melanogaster / physiology; Epistasis, Genetic; Evolution, Molecular; Female; Gene Expression; Gene Regulatory Networks; Genes, Insect; Male; Mutation; Phenotype
TL;DR: The transcriptional signatures of homozygous and double heterozygous genotypes derived from the six mutations imply a large mutational target for aggressive behavior and point to evolutionarily conserved genetic mechanisms and neural signaling pathways affecting this universal fitness trait. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Source: Crossref
Added: August 28, 2020

2011 journal article

Many needles in a haystack: cell-type specific abiotic stress responses

Current Opinion in Plant Biology, 14(3), 325–331.

By: T. Long*

Contributors: T. Long*

MeSH headings : Cell Nucleus / genetics; Flow Cytometry / methods; Gene Expression Profiling; Gene Expression Regulation, Plant / genetics; Genomics; Iron / metabolism; Lasers; Metabolome; Microdissection / methods; Organ Specificity; Plant Cells / classification; Plant Cells / physiology; Plant Epidermis / cytology; Plant Epidermis / metabolism; Plant Roots / cytology; Plants / anatomy & histology; Plants / genetics; Plants / metabolism; Polyribosomes / genetics; Polyribosomes / immunology; RNA, Messenger / immunology; RNA, Messenger / isolation & purification; Stress, Physiological / genetics
TL;DR: Continuous technological advances in profiling the proteomes, metabolomes, and other biological components of specific cells will continue to broaden the understanding of plant stress responses. (via Semantic Scholar)
Sources: ORCID, Crossref
Added: February 11, 2020

2011 journal article

Influence of Juice Preparations on the Fermentability of Sweet Sorghum

Biological Engineering Transactions, 4(2), 57–67.

By: E. Bridgers, M. Chinn*, M. Veal & L. Stikeleather

Sources: Crossref, NC State University Libraries
Added: January 27, 2020

2011 journal article

Gasification and synthesis gas fermentation: an alternative route to biofuel production

Biofuels, 2(4), 405–419.

By: R. Slivka n, M. Chinn n & A. Grunden

UN Sustainable Development Goal Categories
7. Affordable and Clean Energy (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: January 27, 2020

2011 journal article

Influence of Carbon Source Pre-Adaptation on Clostridium ljungdahlii Growth and Product Formation

Journal of Bioprocessing & Biotechniques, 01(S2).

By: O. Tirado-Acevedo, J. L. Cotter, M. S. Chinn & A. M. Grunden

TL;DR: In this rapid communication, Clostridium ljungdahlii was grown on different carbon sources to identify ideal pre-adaptation conditions for ethanol and acetate production from subsequent cultures grown in reactors containing syngas only or fructose-syngas substrates. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 27, 2020

2011 journal article

Global diversity and distribution of arbuscular mycorrhizal fungi

Soil Biology and Biochemistry, 43(11), 2294–2303.

author keywords: Arbuscular mycorrhizal fungi; Biogeography; Diversity; Dispersal limitation; Environmental filtering; Biotic interactions
TL;DR: The results indicated that the global species richness of AM fungi was up to six times higher than previously estimated, largely owing to high beta diversity among sampling sites and habitat filtering or dispersal limitation is a driver of AM fungal community assembly. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2011 journal article

Evolutionary trade-offs among decomposers determine responses to nitrogen enrichment

Ecology Letters, 14(9), 933–938.

By: K. Treseder*, S. Kivlin & C. Hawkes*

author keywords: Database synthesis; labile organic carbon; Micrococcineae; nitrogen; phylogenetic independent contrasts; Pseudomonas; recalcitrant organic carbon
MeSH headings : Bacteria / metabolism; Biological Evolution; Carbon / metabolism; Ecosystem; Nitrates / metabolism; Nitrogen / metabolism; Seawater / chemistry; Seawater / microbiology; Soil / chemistry; Soil Microbiology
TL;DR: It is found that taxa that used more recalcitrant carbon compounds were more prevalent in ocean waters with higher nitrate concentrations, and labile carbon users targeted more organic N compounds, and were more common in higher latitude soils, which is consistent with the paradigm that N-limitation is stronger at higher latitudes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Source: ORCID
Added: December 19, 2019

2011 journal article

Regulation of imprinted gene expression in Arabidopsis endosperm

Proceedings of the National Academy of Sciences, 108(5), 1755–1762.

By: T. Hsieh*, J. Shin*, R. Uzawa*, P. Silva*, S. Cohen*, M. Bauer*, M. Hashimoto*, R. Kirkbride* ...

author keywords: epigenetics; gene imprinting; angiosperm reproduction; DNA demethylation
MeSH headings : Arabidopsis / embryology; Arabidopsis / genetics; DNA Methylation; Gene Expression Regulation, Plant; Genes, Plant; Genomic Imprinting; Mutation; Ovule; Pollen; Reverse Transcriptase Polymerase Chain Reaction; Seeds / metabolism
TL;DR: The results show that imprinted gene expression is an extensive mechanistically complex phenomenon that likely affects multiple aspects of seed development. (via Semantic Scholar)
Sources: ORCID, Crossref
Added: September 13, 2019

2011 journal article

MethylCoder: software pipeline for bisulfite-treated sequences

Bioinformatics, 27(17), 2435–2436.

By: B. Pedersen*, T. Hsieh*, C. Ibarra* & R. Fischer*

MeSH headings : Cytosine / metabolism; DNA / chemistry; DNA / metabolism; DNA Methylation; Genomics / methods; Sequence Alignment / methods; Sequence Analysis, DNA; Software; Sulfites
TL;DR: MethylCoder is a software program that generates per-base methylation data given a set of bisulfite-treated reads and provides the option to use either of two existing short-read aligners, each with different strengths. (via Semantic Scholar)
Sources: ORCID, Crossref
Added: September 13, 2019

2011 journal article

High-throughput phenotyping of multicellular organisms: finding the link between genotype and phenotype

Genome Biology, 12(3), 219.

MeSH headings : Animals; Automation, Laboratory; Biotechnology; Caenorhabditis elegans / genetics; Caenorhabditis elegans / metabolism; Genetic Association Studies / methods; High-Throughput Screening Assays / methods; Mice; Phenotype; Plants / genetics; Plants / metabolism; RNA Interference
TL;DR: High-throughput phenotyping approaches (phenomics) are being combined with genome-wide genetic screens to identify alterations in phenotype that result from gene inactivation in multicellular organisms. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: February 8, 2019

2011 journal article

Arabidopsis homologs of the petunia hairy meristem gene are required for maintenance of shoot and root indeterminacy

Plant Physiology, 155(2), 735–750.

By: E. Engstrom*, C. Andersen*, J. Gumulak-Smith*, J. Hu*, E. Orlova*, R. Sozzani*, J. Bowman*

MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Gene Expression Regulation, Plant; Gene Knockout Techniques; Inflorescence / genetics; Inflorescence / growth & development; Mutation; Phenotype; Phylogeny; Plant Roots / genetics; Plant Roots / growth & development; Plant Shoots / genetics; Plant Shoots / growth & development; RNA, Plant / genetics
TL;DR: Arabidopsis mutants triply homozygous for knockout alleles in three Arabidopsis HAM orthologs exhibit loss of indeterminacy in both the shoot and root, which is fundamental to the generation of plant architecture and a central component of the plant life strategy. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: February 8, 2019

2011 article

The Olavius algarvensis Metagenome Revisited: Lessons Learned from the Analysis of the Low-Diversity Microbial Consortium of a Gutless Marine Worm

Kleiner, M., Woyke, T., Ruehland, C., & Dubilier, N. (2011, November 10). Handbook of Molecular Microbial Ecology II, pp. 319–333.

By: M. Kleiner*, T. Woyke*, C. Ruehland* & N. Dubilier*

UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Source: ORCID
Added: February 3, 2019

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