Works Published in 2012

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Displaying works 1 - 20 of 64 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2012 journal article

Methanocella conradii sp. nov., a Thermophilic, Obligate Hydrogenotrophic Methanogen, Isolated from Chinese Rice Field Soil

Zhe Lyu

MeSH headings : Base Composition; DNA Restriction Enzymes / genetics; Methanomicrobiaceae / classification; Methanomicrobiaceae / genetics; Methanomicrobiaceae / growth & development; Methanomicrobiaceae / ultrastructure; Molecular Sequence Data; Phylogeny; RNA, Ribosomal, 16S; Soil Microbiology
TL;DR: Strain HZ254T is proposed as a representative of a novel species, Methanocella conradii sp. (via Semantic Scholar)
Source: ORCID
Added: August 16, 2023

2012 journal article

Complete Genome Sequence of a Thermophilic Methanogen, Methanocella conradii HZ254, Isolated from Chinese Rice Field Soil

Journal of Bacteriology, 194(9), 2398–2399.

TL;DR: The complete genome sequence of a novel isolate in this group, Methanocella conradii strain HZ254, is reported, which indicates a key role in methane emissions in paddy fields. (via Semantic Scholar)
Source: ORCID
Added: August 16, 2023

2012 journal article

Grappling with Proteus: population level approaches to understanding microbial diversity

Frontiers in Microbiology, 3, 336.

By: M. Choudoir, A. Campbell & D. Buckley

Source: ORCID
Added: September 18, 2022

2012 journal article

Meiotic prophase requires proteolysis of m phase regulators mediated by the meiosis-specific APC/CAma1

Cell, 151(3), 603–618.

By: E. Okaz*, O. Argüello-Miranda*, A. Bogdanova*, P. Vinod*, J. Lipp*, Z. Markova*, I. Zagoriy*, B. Novak*, W. Zachariae*

Contributors: E. Okaz*, O. Argüello-Miranda*, A. Bogdanova*, P. Vinod*, J. Lipp*, Z. Markova*, I. Zagoriy*, B. Novak*, W. Zachariae*

MeSH headings : Anaphase-Promoting Complex-Cyclosome; Cdc20 Proteins; Cell Cycle Proteins / metabolism; Chromosome Segregation; Chromosomes, Fungal / metabolism; DNA-Binding Proteins / metabolism; Meiosis; Metaphase; Prophase; Protein Serine-Threonine Kinases / metabolism; Proteolysis; Saccharomyces cerevisiae / cytology; Saccharomyces cerevisiae / metabolism; Saccharomyces cerevisiae Proteins / metabolism; Spindle Apparatus; Transcription Factors / metabolism; Ubiquitin-Protein Ligase Complexes / metabolism
TL;DR: It is shown that an extended prophase I additionally requires the suppression of latent, mitotic cell-cycle controls by the anaphase-promoting complex (APC/C) and its meiosis-specific activator Ama1, which trigger the degradation of M phase regulators and Ndd1, a subunit of a mitotic transcription factor. (via Semantic Scholar)
Source: ORCID
Added: July 11, 2022

2012 conference paper

Investigation of sclerotial morphogenesis in the soil fungus Rhizoctonia solani

Presented at the Mycological Society Annual Meeting, Yale University, New Haven, CT.

By: E. Thomas, N. Taylor, M. Figueroa-Contreras, Z. Zhang, K. Ivors & M. Cubeta

Event: Mycological Society Annual Meeting at Yale University, New Haven, CT

Source: NC State University Libraries
Added: May 21, 2022

2012 journal article

Self-pollinated Artemisia annua plants form a new platform to understand artemisinin biosynthesis

Pharmaceutical Biology, 50(5), 662–662.

By: D. Xie, F. Alejos-Gonzalez & G. Qu

Source: NC State University Libraries
Added: November 24, 2021

2012 journal article

Discovery of Hydrocotyle bowlesioides (Araliaceae) in Louisiana

Journal of the Botanical Research Institute of Texas, 6(1), 283–285.

By: R. Thornhill & A. Krings

Source: NC State University Libraries
Added: August 14, 2021

2012 conference paper

Programming and reprogramming of gene expression: Mechanisms of cellular specific metabolisms?

Pharmaceutical Biology, 50(11), 1356–1356.

By: D. Xie & M. Shi

Event: 51st Annual Meeting of the Phytochemical Society of North America at University of Western Ontario, London, Ontario, Canada on August 11-15, 2012

Source: NC State University Libraries
Added: April 4, 2021

2012 chapter

Comparative Metabolomics of Transgenic Tobacco Plants (Nicotiana tabacum var. Xanthi) Reveals Differential Effects of Engineered Complete and Incomplete Flavonoid Pathways on the Metabolome

In Y. O. Çiftçi (Ed.), Transgenic Plants - Advances and Limitations.

By: C. Broeckling n, K. Li & D. Xie n

Ed(s): Y. Çiftçi

TL;DR: Biochemical and genetic evidences have demonstrated that anthocyanins and proanthocyanidins share the same upstream pathway beginning with phenylalanine through a series of enzymatic reaction to Anthocyanin reductase, leading to uncertainty about whether or not this branch catalyzed by LAR exists in plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: March 20, 2021

2012 journal article

Plant Sex and Induced Responses Independently Influence Herbivore Performance, Natural Enemies and Aphid-Tending Ants

Arthropod-Plant Interactions, 6(4), 553–560.

By: K. Mooney*, A. Fremgen* & W. Petry*

author keywords: Ant-aphid interactions; Dioecy; Indirect defense; Induced defense; Natural enemies; Parasitoids; Slow-growth/high-mortality hypothesis; Sexual dimorphism; Valeriana edulis
TL;DR: Plant sexual dimorphism and induced responses to herbivore damage independently influenced Herbivore performance and the composition of arthropod communities at higher trophic levels. (via Semantic Scholar)
Source: ORCID
Added: March 4, 2021

2012 journal article

Influence of Macronutrient Imbalance on Native Ant Foraging and Interspecific Interactions in the Field

Ecological Entomology, 37(3), 175–183.

author keywords: Ant-aphid interaction; ant behaviour; Aphis valerianae; Formica podzolica; nutrient imbalance; nutritional ecology; Valeriana edulis
TL;DR: Ants interact with a diversity of organisms, coupled with their abundance, cause ants to have ecologically important effects across multiple trophic levels and this work aims to characterize these interactions in more detail. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: ORCID
Added: March 4, 2021

2012 journal article

Integration of GC-MS Based Non-Targeted Metabolic Profiling with Headspace Solid Phase Microextraction Enhances the Understanding of Volatile Differentiation in Tobacco Leaves from North Carolina, India and Brazil

American Journal of Plant Sciences, 03(12), 1759–1769.

By: D. Ma n, S. Gandra*, N. Sharma* & D. Xie n

TL;DR: Gas chromatography-mass spectrometry based non-targeted metabolomics is used to develop appropriate headspace solid phase microextractions (HS-SPME) to enhance the understanding of volatile complexity of flue-cured tobacco leaves. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: January 21, 2021

2012 journal article

Differentiation of programmed Arabidopsis cells

Bioengineered, 3(1), 54–59.

By: D. Xie n & M. Shi n

author keywords: Arabidopsis thaliana; anthocyanin; PAP1; metabolic; engineering; metabolic fate; plant secondary metabolism
MeSH headings : Anthocyanins / metabolism; Arabidopsis / cytology; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Differentiation / genetics; Cell Differentiation / physiology; Gene Expression Regulation, Plant; Pancreatitis-Associated Proteins; Transcription Factors / genetics; Transcription Factors / metabolism
TL;DR: The potential mechanisms that underlie the programming and reprogramming of gene expression involved in anthocyanin biosynthesis are discussed. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: September 14, 2020

2012 journal article

Convergent and divergent evolution of metabolism in sulfur-oxidizing symbionts and the role of horizontal gene transfer

Current Opinion in Microbiology, 15(5), 621–631.

MeSH headings : Animals; Aquatic Organisms / microbiology; Aquatic Organisms / physiology; Bacteria / genetics; Bacteria / metabolism; Bacterial Physiological Phenomena; Evolution, Molecular; Gene Transfer, Horizontal; Genetic Variation; Genomics / methods; Invertebrates / microbiology; Invertebrates / physiology; Metabolic Networks and Pathways / genetics; Oxidation-Reduction; Phylogeny; RNA, Ribosomal, 16S / genetics; Sulfur Compounds / metabolism; Symbiosis
TL;DR: It is hypothesize that horizontal gene transfer (HGT) would explain many of these incongruencies, and conclude that HGT may have played a significant role in shaping the metabolic evolution of GammaSOX symbionts. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Crossref, NC State University Libraries
Added: September 12, 2020

2012 journal article

Epistasis dominates the genetic architecture of Drosophila quantitative traits

Proceedings of the National Academy of Sciences, 109(39), 15553–15559.

By: W. Huang, S. Richards*, M. Carbone*, D. Zhu*, R. Anholt n, J. Ayroles, L. Duncan, K. Jordan ...

author keywords: chill coma recovery; genetic interaction networks; genome-wide association studies; startle response; starvation resistance
MeSH headings : Animals; Drosophila melanogaster; Epistasis, Genetic / physiology; Genes, Insect / physiology; Polymorphism, Single Nucleotide; Quantitative Trait, Heritable
TL;DR: The analysis underscores the importance of epistasis as a principal factor that determines variation for quantitative traits and provides a means to uncover genetic networks affecting these traits. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Crossref
Added: August 28, 2020

2012 journal article

The Drosophila melanogaster Genetic Reference Panel

Nature, 482(7384), 173–178.

By: T. Mackay n, S. Richards*, E. Stone n, A. Barbadilla*, J. Ayroles n, D. Zhu*, S. Casillas*, Y. Han* ...

MeSH headings : Alleles; Animals; Centromere / genetics; Chromosomes, Insect / genetics; Drosophila melanogaster / genetics; Genome-Wide Association Study; Genomics; Genotype; Phenotype; Polymorphism, Single Nucleotide / genetics; Quantitative Trait Loci / genetics; Selection, Genetic / genetics; Starvation / genetics; Telomere / genetics; X Chromosome / genetics
TL;DR: The Drosophila melanogaster Genetic Reference Panel is described, a community resource for analysis of population genomics and quantitative traits, which reveals reduced polymorphism in centromeric autosomal regions and the X chromosomes, evidence for positive and negative selection, and rapid evolution of the X chromosome. (via Semantic Scholar)
Source: Crossref
Added: August 28, 2020

2012 journal article

Advanced Oxidation of Toluene Using Ni-Olivine Catalysts: Part 1. Synthesis, Characterization, and Evaluation of Ni-Olivine Catalysts for Toluene Oxidation

Transactions of the ASABE, 55(3), 1013–1024.

By: V. Smith, P. Kolar, M. Boyette, M. Chinn*, C. Smith, R. Gangadharan, G. Zhang

Sources: Crossref, NC State University Libraries
Added: January 27, 2020

2012 journal article

Consolidated Bioprocessing of Lignocellulosic Feedstocks for Ethanol Fuel Production

BioEnergy Research, 6(2), 416–435.

By: B. Schuster n & M. Chinn n

author keywords: Bio-ethanol; Fuel; Consolidated bioprocessing; Simultaneous saccharification and fermentation; Co-cultures; Enzyme hydrolysis; Pretreatment
TL;DR: This review examines the favorable and undesirable qualities of wild-type and genetically engineered microorganisms and their enzyme systems, process engineering considerations for particular organisms, characteristics of cellulosomes, enzyme engineering strategies, progress in commercial development, and the impact of these topics on current and future research. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Crossref, NC State University Libraries
Added: January 27, 2020

2012 journal article

A Role for Phosphoinositides in Regulating Plant Nuclear Functions

Frontiers in Plant Science, 3.

By: C. Dieck n, W. Boss n & I. Perera n

author keywords: nucleus; phosphoinositide; inositol phosphate; phosphatidylinositol; plant; signaling; chromatin remodeling
TL;DR: In this review, the potential functions of the nuclear PI pathway in plants are discussed within the context of the animal and yeast literature and it is anticipated that future research will help shed light on the functional significance of thenuclear PI pathways in plants. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 25, 2020

2012 journal article

AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during Arabidopsis development

The Plant Cell Online, 24(7), 2874–2885.

By: B. Péret*, K. Swarup*, A. Ferguson*, M. Seth*, Y. Yang*, S. Dhondt*, N. James*, I. Casimiro*, P. Perry*, A. Syed*

Contributors: B. Péret*, K. Swarup*, A. Ferguson*, M. Seth*, Y. Yang*, S. Dhondt*, N. James*, I. Casimiro*, P. Perry*, A. Syed*

MeSH headings : Arabidopsis / cytology; Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Biological Transport; Body Patterning; Cotyledon / cytology; Cotyledon / genetics; Cotyledon / growth & development; Cotyledon / metabolism; Gene Knockout Techniques; Indoleacetic Acids / metabolism; Membrane Transport Proteins / genetics; Membrane Transport Proteins / metabolism; Multigene Family; Mutagenesis, Insertional; Phenotype; Plant Roots / cytology; Plant Roots / genetics; Plant Roots / growth & development; Plant Roots / metabolism; Plant Vascular Bundle / cytology; Plant Vascular Bundle / genetics; Plant Vascular Bundle / growth & development; Plant Vascular Bundle / metabolism; Plants, Genetically Modified; Seedlings / cytology; Seedlings / genetics; Seedlings / growth & development; Seedlings / metabolism
TL;DR: It is reported that LAX2 regulates vascular patterning in cotyledons and is concluded that Arabidopsis AUX/LAX genes encode a family of auxin influx transporters that perform distinct developmental functions and have evolved distinct regulatory mechanisms. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Source: ORCID
Added: December 19, 2019

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