Works Published in 2019
Displaying works 1 - 20 of 91 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2019 article
Inositol Trisphosphate Kinase and Diphosphoinositol Pentakisphosphate Kinase Enzymes Constitute the Inositol Pyrophosphate Synthesis Pathway in Plants
Adepoju, O., Williams, S. P., Craige, B., Cridland, C. A., Sharpe, A. K., Brown, A. M., … Gillaspy, G. (2019, August 5).
TL;DR:
A molecular basis for understanding how plants synthesize PP-InsPs is defined which is crucial for determining the roles of these signaling molecules in processes such as Pi sensing and to help design future strategies to increase phosphate efficiency in plants.
(via Semantic Scholar)
doi.org (repository)
Source: ORCID
Added: February 1, 2024
2019 journal article
Inositol Pyrophosphates and Phosphate Sensing in Plants
The FASEB Journal.
TL;DR:
The results support a model in which InsP7 and InsP8 function to turn off the PSR in plants, and genetic mutants key for understanding inositol kinase gene function in plants are described.
(via Semantic Scholar)
Source: ORCID
Added: December 4, 2023
2019 journal article
Transplanting the pathway engineering toolbox to methanogens
Current Opinion in Biotechnology, 59, 46–54.
MeSH headings : Animals; Chemoautotrophic Growth; Ecosystem; Humans; Methane; Soil
TL;DR:
This work states that modern methanogenesis is now a key process in virtually all anaerobic microbial communities, such as marine and lake sediments, wetland and rice soils, and human and cattle digestive tracts, and new opportunities for bioengineering methanogens are provided.
(via Semantic Scholar)
Source: ORCID
Added: August 16, 2023
2019 article
Diversity and Taxonomy of Methanogens
Lyu, Z., & Liu, Y. (2019, July). Biogenesis of Hydrocarbons, pp. 19–77.
Source: ORCID
Added: August 16, 2023
2019 journal article
The Nbp35/ApbC homolog acts as a nonessential [4Fe‐4S] transfer protein in methanogenic archaea
FEBS Letters, 594(5), 924–932.
MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Cell Nucleus / metabolism; Cytosol / metabolism; Gene Deletion; Iron-Sulfur Proteins / genetics; Iron-Sulfur Proteins / metabolism; Methanococcus / genetics; Methanococcus / growth & development; Methanococcus / metabolism; Phylogeny
TL;DR:
The data indicate that Nbp35/ApbC is a nonessential [4Fe‐4S] cluster transfer protein in methanogenic archaea.
(via Semantic Scholar)
Source: ORCID
Added: August 16, 2023
2019 journal article
A Phylogenetic and Functional Perspective on Volatile Organic Compound Production by Actinobacteria
MSystems, 4(2).
Ed(s): K. Whiteson
author keywords: Actinobacteria; VOC; actinomycetes; microbial interactions; natural products; volatile organic compounds
TL;DR:
A strong taxonomic and phylogenetic signal for VOC profiles is observed, suggesting their role in finer-scale patterns of ecological diversity, and their effects on growth rates of both pathogenic and nonpathogenic pseudomonad strains are investigated.
(via Semantic Scholar)
Source: ORCID
Added: September 18, 2022
2019 journal article
Metaproteomics reveals persistent and phylum-redundant metabolic functional stability in adult human gut microbiomes of Crohn’s remission patients despite temporal variations in microbial taxa, genomes, and proteomes
Microbiome.
author keywords: Gut microbiome; Metaproteomics; Crohn's disease; Longitudinal analyses; Microbial metabolic function; Human microbiome
MeSH headings : Acetylglucosamine / analysis; Adult; Bacteria / genetics; Bacteria / metabolism; Crohn Disease / microbiology; Crohn Disease / surgery; Cytidine Monophosphate N-Acetylneuraminic Acid / analysis; Fatty Acids, Volatile / analysis; Feces / microbiology; Female; Gastrointestinal Microbiome / genetics; Gastrointestinal Microbiome / physiology; Humans; Male; Middle Aged; Proteome / metabolism; Proteomics; RNA, Ribosomal, 16S / genetics
TL;DR:
Examining metaproteomes measured in several Crohn’s disease patients’ post-resection surgery across the course of 1 year suggests that microbial membership composition may not be the best way to characterize a phenotype and suggests it seems to be more informative to examine and characterize the functional composition of a gut microbiome.
(via Semantic Scholar)
Source: ORCID
Added: August 25, 2022
2019 journal article
Combining integrated systems-biology approaches with intervention-based experimental design provides a higher-resolution path forward for microbiome research
Behavioral and Brain Sciences.
TL;DR:
This commentary extends their review of microbiota-gut-brain literature by highlighting capabilities of advanced systems-biology “-omics” techniques for microbiome research and recommending that combining these high-resolution techniques with intervention-based experimental design may be the path forward for future MGB research.
(via Semantic Scholar)
Source: ORCID
Added: August 25, 2022
2019 journal article
Meiosis research in orphan and non-orphan tropical crops
Frontiers in Plant Science, 10, 1–7.
Contributors: P. Bolaños-Villegas * & O. Argüello-Miranda*
author keywords: meiosis; plant breeding; genetic diversity; tropical agriculture; food security; climate change
TL;DR:
This review covers technical approaches to engineer key meiotic genes in tropical crops as a blueprint for future work and examples of tropical crops in which such strategies could be applied.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
Source: ORCID
Added: July 11, 2022
2019 article
TheTrichoplaxmicrobiome: the simplest animal lives in an intimate symbiosis with two intracellular bacteria
Gruber-Vodicka, H. R., Leisch, N., Kleiner, M., Hinzke, T., Liebeke, M., McFall-Ngai, M., … Dubilier, N. (2019, March 5). (Vol. 3). Vol. 3.
TL;DR:
This study shows that even the simplest animals known have evolved highly specific and intimate associations with symbiotic, intracellular bacteria, and highlights that symbioses with microorganisms are a basal trait of animal life.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 9, 2021
2019 article
Sulfur-oxidizing symbionts without canonical genes for autotrophic CO2fixation
Seah, B. K. B., Antony, C. P., Huettel, B., Zarzycki, J., Borzyskowski, L. S., Erb, T. J., … Gruber-Vodicka, H. R. (2019, February 5). (Vol. 2). Vol. 2.
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 9, 2021
2019 article
Host-microbe interactions in the chemosyntheticRiftia pachyptilasymbiosis
Hinzke, T., Kleiner, M., Breusing, C., Felbeck, H., Häsler, R., Sievert, S. M., … Markert, S. (2019, May 27). (Vol. 5). Vol. 5.
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 9, 2021
2019 journal article
Inducibility of chemical defences in young oak trees is stronger in species with high elevational ranges
Tree Physiology, 39(4), 606–614.
author keywords: climate; defences; elevation; herbivory; phenolic compounds; Quercus
MeSH headings : Altitude; Animals; Ecology; Herbivory; Host-Parasite Interactions; Moths / physiology; Phenotype; Plant Diseases / immunology; Plant Diseases / parasitology; Plant Leaves / chemistry; Plant Leaves / immunology; Plant Leaves / physiology; Quercus / chemistry; Quercus / immunology; Quercus / physiology; Tannins / metabolism
TL;DR:
Overall, this study builds towards a more robust and integrative understanding of how multivariate plant defensive phenotypes vary along ecological gradients and their underlying abiotic drivers.
(via Semantic Scholar)
Source: ORCID
Added: March 4, 2021
2019 book
Molecular Biology Techniques: A Classroom Laboratory Manual
(4th edition). London: Academic Press.
Sources: NC State University Libraries, ORCID
Added: November 21, 2020
2019 journal article
Advancing Critical and Creative Thinking through Institutional Transformation
The RC20/20 Project: A Digital Publication of the Reinvention Collaborative. https://www.rc-2020.org/carson.
Sources: NC State University Libraries, ORCID
Added: November 21, 2020
2019 journal article
Identification and Characterization of the Core Rice Seed Microbiome
PHYTOBIOMES JOURNAL, 3(2), 148–157.
author keywords: endophytes; metagenomics; microbiome; microorganism
TL;DR:
These core members represent valuable candidates for manipulating the rice microbiome, decreasing the use of chemicals while increasing plant performance.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science; OpenAlex)
Source: Web Of Science
Added: May 26, 2020
2019 article
Building a Culture of Critical and Creative Thinking. Creating and Sustaining Higher-Order Thinking as part of a Quality Enhancement Plan
5TH INTERNATIONAL CONFERENCE ON HIGHER EDUCATION ADVANCES (HEAD'19), pp. 1391–1398.
author keywords: higher-order thinking; quality enhancement; critical and creative thinking; program development; teaching strategies
UN Sustainable Development Goal Categories
4. Quality Education
(Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: February 27, 2020
2019 journal article
Artemisinin Biosynthesis in Non-glandular Trichome Cells of Artemisia annua
Molecular Plant, 12(5), 704–714.
author keywords: Artemisia annua; artemisinin; glandular trichome; non-glandular trichome cell
MeSH headings : Artemisia annua / cytology; Artemisia annua / genetics; Artemisia annua / metabolism; Artemisia annua / physiology; Artemisinins / metabolism; Metabolic Engineering; Mutation; Pollination; Trichomes / metabolism
TL;DR:
It is reported that non-GT cells of self-pollinated inbred A. annua plants can express the artemisinin biosynthetic pathway and leaves of regenerated gl plantlets biosynthesize artemis inin.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Crossref, NC State University Libraries
Added: February 24, 2020
2019 journal article
Dynamic modelling of the iron deficiency modulated transcriptome response in Arabidopsis thaliana roots
In Silico Plants.
author keywords: Arabidopsis thaliana; modelling; ODE; Gene Regulatory Network; plant stress response
TL;DR:
A dynamic model of the iron deficiency induced transcriptional response in Arabidopsis thaliana was formulated and trained to approximate the expression behaviour of currently unknown gene regulators, unveil potential synergistic effects between the modulating transcription factors and predict the effect of double regulator mutants.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science; OpenAlex)
Source: ORCID
Added: February 11, 2020
2019 journal article
Comparative proteomics of related symbiotic mussel species reveals high variability of host-symbiont interactions.
The ISME Journal.
MeSH headings : Amino Acids / genetics; Amino Acids / metabolism; Animals; Bacteria / genetics; Bacteria / metabolism; Carbonic Anhydrases / metabolism; Chemoautotrophic Growth; Genome, Bacterial / genetics; Gills / metabolism; Host Microbial Interactions; Mytilidae / metabolism; Mytilidae / microbiology; Proteomics; Symbiosis / genetics; Symbiosis / physiology
TL;DR:
Common strategies of metabolic support between hosts and symbionts, such as the oxidation of sulfide by the host, which provides a thiosulfate reservoir for the thiotrophic symbionte, and a cycling mechanism that could supply the host with symbiont-derived amino acids are identified.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(Web of Science; OpenAlex)
Source: ORCID
Added: January 30, 2020
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