Works Published in 2007
Displaying works 1 - 20 of 49 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2007 speech
Induction kinetics of defense-related genes in rust infected dyer’s woad
Presented at the 2007 North American Cereal Rust Workshop, St Paul, Minnesota.
Event: 2007 North American Cereal Rust Workshop at St Paul, Minnesota
Source: NC State University Libraries
Added: May 21, 2022
2007 conference paper
Quality Assessment of Affymetrix GeneChip Data using the EM Algorithm and a Naive Bayes Classifier
2007 IEEE 7th International Symposium on BioInformatics and BioEngineering, 145–150.
Contributors: B. Howard n, B. Sick n, I. Perera n , J. Yang, H. Winter-Sederoff & S. Heber n
Event: 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering
TL;DR:
This paper demonstrates the utility of an unsupervised classification technique based on the Expectation-Maximization (EM) algorithm and naive Bayes classification that exhibits performance comparable to that of an analogous supervised learner constructed from the same training data.
(via Semantic Scholar)
Sources: Crossref, NC State University Libraries, ORCID
Added: September 6, 2020
2007 journal article
Parenting quality, DRD4, and the prediction of externalizing and internalizing behaviors in early childhood
Developmental Psychobiology, 49(6), 619–632.
author keywords: dopamine; externalizing behavior; internalizing behavior; maternal sensitivity; parenting; gene-environment interactions
MeSH headings : Child; Child Behavior; Child, Preschool; Environment; Female; Genotype; Humans; Infant; Male; Maternal Behavior; Parent-Child Relations; Parenting; Polymorphism, Genetic / genetics; Prospective Studies; Receptors, Dopamine D4 / genetics; Socioeconomic Factors
TL;DR:
Results revealed that high warm-responsive parenting was associated with decreased externalizing behavior only for African American children possessing the short polymorphism of DRD4, indicating that children may be differentially susceptible to different aspects of parenting depending on their genotype.
(via Semantic Scholar)
Source: Crossref
Added: August 28, 2020
2007 journal article
Pathway, inhibition and regulation of methyl tertiary butyl ether oxidation in a filamentous fungus, Graphium sp.
Applied Microbiology and Biotechnology.
author keywords: methyl tertiary butyl alcohol; cometabolism; Graphium sp; tertiary butyl alcohol; tertiary butyl formate; alkane monooxygenase
MeSH headings : Ascomycota / metabolism; Biodegradation, Environmental; Methyl Ethers / antagonists & inhibitors; Methyl Ethers / metabolism; Mycelium / metabolism; Oxidation-Reduction; Propane / metabolism; tert-Butyl Alcohol / metabolism
TL;DR:
The results collectively suggest that propane-grown mycelia only have a limited capacity to degrade TBA, and the regulatory effects of MTBE oxidation intermediates proposed for MTBE-degrading organisms such as Mycobacterium austroafricanum are not universally relevant mechanisms for MT BE-degRading organisms.
(via Semantic Scholar)
Source: ORCID
Added: April 28, 2020
2007 journal article
A Balanced PGR5 Level is Required for Chloroplast Development and Optimum Operation of Cyclic Electron Transport Around Photosystem I
Plant and Cell Physiology, 48(10), 1462–1471.
Contributors: Y. Okegawa, T. Long* , M. Iwano, S. Takayama, Y. Kobayashi, S. Covert, T. Shikanai
author keywords: antimycin A; Arabidopsis; ferredoxin; NPQ; PGR5; PSI; cyclic electron transport
MeSH headings : Antimycin A / pharmacology; Arabidopsis / drug effects; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Chloroplasts / metabolism; Cotyledon / metabolism; Electron Transport / physiology; Gene Expression Regulation, Plant; Light; Oxidation-Reduction; Photosynthetic Reaction Center Complex Proteins / genetics; Photosynthetic Reaction Center Complex Proteins / metabolism; Photosystem I Protein Complex / metabolism; Time Factors
TL;DR:
It is proposed that a balanced PGR5 level is required for efficient regulation of the rate of antimycin A-sensitive PSI cyclic electron transport, although the rate is probably also regulated by other factors during steady-state photosynthesis.
(via Semantic Scholar)
academic.oup.com (publisher PDF)
Source: ORCID
Added: February 11, 2020
2007 journal article
A New Paradigm for Mentored Undergraduate Research in Molecular Microbiology
CBE—Life Sciences Education, 6(4), 343–349.
Ed(s): M. Ledbetter
MeSH headings : Biology / education; Clinical Laboratory Techniques; Curriculum; Faculty; Humans; Mentors; Molecular Biology / education; Natural Science Disciplines; Program Evaluation; Research Personnel; Software; Students; Teaching; Universities
TL;DR:
This article describes a paradigm for mentored undergraduate research in molecular microbiology where students have ownership of their individual projects, but the projects are done in parallel, enabling the faculty mentor to guide multiple students efficiently.
(via Semantic Scholar)
Sources: Crossref, NC State University Libraries
Added: January 19, 2020
2007 journal article
Genome-Wide High-Resolution Mapping of Exosome Substrates Reveals Hidden Features in the< i> Arabidopsis</i> Transcriptome
Genome-Wide High-Resolution Mapping of Exosome Substrates Reveals Hidden Features in the< i> Arabidopsis Transcriptome. Cell, 131(7), 1340–1353.
Contributors: J. Chekanova*, B. Gregory *, S. Reverdatto *, H. Chen *, R. Kumar *, T. Hooker*, J. Yazaki *, P. Li*, N. Skiba *, Q. Peng *
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Chromosome Mapping / methods; Exoribonucleases / genetics; Exoribonucleases / metabolism; Exosome Multienzyme Ribonuclease Complex; Gene Expression Profiling / methods; Gene Expression Regulation, Plant; Genotype; MicroRNAs / metabolism; Molecular Sequence Data; Mutation; Nuclear Proteins / metabolism; Nucleic Acid Conformation; Oligonucleotide Array Sequence Analysis; Peptide Mapping; Phenotype; Plants, Genetically Modified / metabolism; Proteomics / methods; RNA / chemistry; RNA / metabolism; RNA Interference; RNA, Messenger / metabolism; RNA, Small Interfering / metabolism; RNA, Untranslated / metabolism; Tandem Mass Spectrometry
TL;DR:
It is demonstrated that as opposed to yeast and metazoans the plant exosome core possesses an unanticipated functional plasticity and a genome-wide atlas of Arabidopsis exosomes targets is presented, which will aid in illuminating new fundamental components and regulatory mechanisms of eukaryotic transcriptomes.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2007 journal article
Are Invaders Moving Targets? The Generality and Persistence of Advantages in Size, Reproduction, and Enemy Release in Invasive Plant Species with Time since Introduction
Am Nat, 170(6), 832–843.
author keywords: exotic plants; invasion; congeneric pairs; home versus away; time since introduction; geographic distribution
MeSH headings : Adaptation, Physiological; Animals; Biological Evolution; Conservation of Natural Resources; Ecosystem; Feeding Behavior / physiology; Insecta / physiology; Models, Biological; Plants / anatomy & histology; Population Dynamics; Reproduction; Time Factors
TL;DR:
Time since introduction was a significant nonlinear predictor of enemy release for both herbivores and pathogens, with initial release in recently arrived species and little to no release after 50 to 200 years.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Source: ORCID
Added: December 19, 2019
2007 article
Root Interactions with Soil Microbial Communities and Processes
The Rhizosphere, pp. 1–29.
TL;DR:
Understanding and quantifying the interactions among plants and soil microbes is essential for understanding both plant and soil microbial community ecology and the roles that these communities play in ecosystem function.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Source: ORCID
Added: December 19, 2019
2007 chapter
Genomic Imprinting in Arabidopsis thaliana and Zea mays
In Plant Cell Monographs (pp. 219–239).
TL;DR:
Locus-specific imprinting is found in both maize and Arabidopsis and mechanisms by which the parental alleles are distinguished from one another are focused on.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
Sources: ORCID, Crossref, NC State University Libraries
Added: September 13, 2019
2007 journal article
Endosperm gene imprinting and seed development
Current Opinion in Genetics & Development, 17(6), 480–485.
MeSH headings : DNA Methylation; Gene Silencing; Genomic Imprinting; Histones / metabolism; Models, Genetic; Plant Development; Plants / embryology; Plants / genetics; Polycomb-Group Proteins; Repressor Proteins / genetics; Repressor Proteins / physiology; Seeds / genetics; Seeds / growth & development
TL;DR:
Endosperm gene imprinting can be uncoupled from seed development when fertilization of the central cell is prevented, thereby preventing parthenogenic development of the endosperm.
(via Semantic Scholar)
Sources: ORCID, Crossref, NC State University Libraries
Added: September 13, 2019
2007 journal article
The Concept of Readiness in the Academic Department: A Case Study of Undergraduate Education Reform
Innovative Higher Education, 32(1), 3–18.
author keywords: higher education; academic department; change; inquiry-guided learning
UN Sustainable Development Goal Categories
4. Quality Education
(Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: February 5, 2019
2007 journal article
Endothelialization of Titanium Surfaces
Adv. Mater., 19(18), 2492–2498.
Contributors: S. Meyers *, P. Hamilton* , E. Walsh*, D. Kenan* & M. Grinstaff *
TL;DR:
There is new concern regarding the use of drug-eluting stents owing to an increased thrombolytic potential of two to three fold compared to bare metal stents.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Source: ORCID
Added: January 31, 2019
2007 journal article
The shoot meristem identity gene TFL1 is involved in flower development and trafficking to the protein storage vacuole
Proceedings of the National Academy of Sciences of the United States of America, 104(47), 18801–18806.
Contributors: J. Eun*, M. Rojas-Pierce *, S. Pan*, C. Carter*, A. Serrano-Mislata *, F. Madueño *, E. Rojo *, M. Surpin*, N. Raikhel*
author keywords: protein trafficking; vegetative tissue; adaptin
MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis / ultrastructure; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Flowers / genetics; Flowers / growth & development; Flowers / metabolism; Gene Expression Regulation, Plant; Meristem / genetics; Meristem / metabolism; Microscopy, Electron, Transmission; Microscopy, Immunoelectron; Protein Transport; Vacuoles / genetics; Vacuoles / metabolism; Vacuoles / ultrastructure
TL;DR:
The results suggest a developmental role for the PSV in vegetative tissues and show that an Arabidopsis thaliana mutant that disrupts PSV trafficking identified TERMINAL FLOWER 1 (TFL1), a shoot meristem identity gene.
(via Semantic Scholar)
Source: ORCID
Added: January 30, 2019
2007 journal article
Arabidopsis P-Glycoprotein19 Participates in the Inhibition of Gravitropism by Gravacin
Chemistry & Biology, 14(12), 1366–1376.
Contributors: M. Rojas-Pierce *, B. Titapiwatanakun*, E. Sohn*, F. Fang *, C. Larive*, J. Blakeslee*, Y. Cheng *, S. Cuttler*
MeSH headings : ATP-Binding Cassette Transporters / antagonists & inhibitors; ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Aquaporins / metabolism; Arabidopsis / drug effects; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / antagonists & inhibitors; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Binding, Competitive / physiology; Biological Transport / drug effects; Cell Membrane / metabolism; Furans / metabolism; Furans / pharmacology; Gravitropism / drug effects; HeLa Cells; Humans; Hypocotyl / drug effects; Hypocotyl / genetics; Hypocotyl / metabolism; Indoleacetic Acids / metabolism; Membrane Transport Proteins / genetics; Membrane Transport Proteins / metabolism; Microsomes / metabolism; Molecular Structure; Mutation; Phthalimides / metabolism; Plant Shoots / drug effects; Plant Shoots / genetics; Plant Shoots / metabolism; Protein Binding / drug effects; Protein Transport / drug effects; Recombinant Proteins / metabolism; Transfection
TL;DR:
It is demonstrated that P-glycoprotein19 (PGP19) is a target for Gravacin and participates in its inhibition of gravitropism and E1174 as an important residue for PGP19 activity and its ability to form active transport complexes with PIN1.
(via Semantic Scholar)
Source: ORCID
Added: January 29, 2019
2007 journal article
An adapter ligation-mediated PCR method for high-throughput mapping of T-DNA inserts in the Arabidopsis genome
NATURE PROTOCOLS, 2(11), 2910–2917.
Contributors: . Ronan C. O'Malley, J. Alonso n, C. Kim *, T. Leisse* & J. Ecker *
MeSH headings : Arabidopsis / genetics; Chromosome Mapping / methods; DNA Primers; DNA, Bacterial / chemistry; Genome, Plant; Mutagenesis, Insertional; Polymerase Chain Reaction / methods; Sequence Analysis, DNA; Transformation, Genetic
TL;DR:
This protocol describes an adapter ligation-mediated PCR method that has been used to screen a mutant library and identify over 150,000 T-DNA insertional mutants; the method can also be applied to map individual mutants.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2007 journal article
Sequence, expression and tissue localization of a gene encoding a makorin RING zinc-finger protein in germinating rice (Oryza sativa L. ssp Japonica) seeds
PLANT PHYSIOLOGY AND BIOCHEMISTRY, 45(10-11), 767–780.
author keywords: gene expression; germination; makorin; pea; RT-PCR; non-radioactive in situ hybridization
MeSH headings : Amino Acid Sequence; Base Sequence; DNA, Complementary / chemistry; DNA, Complementary / genetics; Gene Expression Regulation, Developmental; Gene Expression Regulation, Plant; Germination / genetics; In Situ Hybridization; Molecular Sequence Data; Oryza / genetics; Oryza / growth & development; Plant Proteins / genetics; RING Finger Domains / genetics; Reverse Transcriptase Polymerase Chain Reaction; Ribonucleoproteins / genetics; Seeds / genetics; Seeds / growth & development; Sequence Analysis, DNA; Sequence Homology, Amino Acid
TL;DR:
The presence of MKRN transcripts in dry seeds, its early induction during germination and its continued spatiotemporal expression during early vegetative growth suggest that MKRN has an important role in germination, leaf and lateral root morphogenesis and overall development in rice.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Anti-inflammatory properties of Lactobacillus gasseri expressing manganese superoxide dismutase using the interleukin 10-deficient mouse model of colitis
AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY, 293(4), G729–G738.
Contributors: I. Carroll *, J. Andrus*, J. Bruno-Bárcena n , T. Klaenhammer n, H. Hassan n & D. Threadgill
author keywords: probiotic; Lactobacilli; oxidative stress; inflammatory bowel disease
MeSH headings : Animals; Anti-Inflammatory Agents / therapeutic use; Colitis / drug therapy; Colitis / pathology; Colon / pathology; Cyclooxygenase 2 / metabolism; Disease Models, Animal; Immunohistochemistry; Interleukin-10 / deficiency; Lactobacillus / enzymology; Mice; Peroxidase / metabolism; Probiotics / therapeutic use; Specific Pathogen-Free Organisms; Superoxide Dismutase / biosynthesis; Superoxide Dismutase / therapeutic use
TL;DR:
This study demonstrates that L. gasseri producing MnSOD has significant anti-inflammatory activity that reduces the severity of colitis in the IL-10-deficient mouse.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2007 journal article
Intercellular communication in plants: Evidence for two rapidly transmitted systemic signals generated in response to electromagnetic field stimulation in tomato
PLANT CELL AND ENVIRONMENT, 30(7), 834–844.
author keywords: bZIP; mode stirred reverberation chamber; signal transmission
MeSH headings : Abscisic Acid; Cell Communication / drug effects; Cell Communication / radiation effects; Egtazic Acid / pharmacology; Electromagnetic Fields; Lanthanum / pharmacology; Solanum lycopersicum / cytology; Solanum lycopersicum / metabolism; Solanum lycopersicum / radiation effects; Naproxen / pharmacology; Plant Leaves / drug effects; Plant Leaves / radiation effects; Signal Transduction / drug effects; Signal Transduction / radiation effects
TL;DR:
In the jasmonic acid (JA) mutant (JL-5) and in wild-type plants treated with the ABA biosynthesis inhibitor, naproxen, responses were similar to those in the A BA mutant, while treatment of the exposed leaf with calcium antagonists totally abolished both local and systemic increases in bZIP transcript accumulation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Influence of fire and southern pine beetle on pine-dominated forests in the Linville Gorge Wilderness, North Carolina
Castanea, 72(4), 214–225.
TL;DR:
Examining the influences of fire and southern pine beetle infestation on stand structure and resin flow of pines in pine-dominated forests in the Linville Gorge Wilderness of North Carolina found resin flow was substantially higher in trees that were exposed to fire, but not infested, than in trees experiencing any other combination of fire exposure and infestation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science; OpenAlex)
Source: NC State University Libraries
Added: August 6, 2018
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