Works Published in 2017
Displaying works 1 - 20 of 121 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2017 journal article
Sanguibacter gelidistatuariae sp. nov., a novel psychrotolerant anaerobe from an ice sculpture in Antarctica, and emendation of descriptions for the family Sanguibacteraceae, the genus Sanguibacter and species S. antarcticus, S. inulinus, S. kedieii, S. marinus, S.soli and S. suarezii.
International Journal of Systematic and Evolutionary Microbiology.
TL;DR:
A novel psychrotolerant bacterium, strain ISLP-3T, was isolated from a sample of naturally formed ice sculpture on the shore of Lake Podprudnoye in Antarctica, suggesting that this new isolate represents a novel species within the genus Sanguibacter.
(via Semantic Scholar)
doi.org (publisher)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 16, 2023
2017 article
Mmp10 is required for post-translational methylation of arginine at the active site of methyl-coenzyme M reductase
Lyu, Z., Chou, C.-wen, Shi, H., Patel, R., Duin, E. C., & Whitman, W. B. (2017, October 30). (Vol. 10). Vol. 10.
TL;DR:
This study demonstrates the importance of Mmp10 and the methyl-Arg PTM on Mcr activity and shows that the rates of methane formation of the complemented strains were not always restored to the wild type level.
(via Semantic Scholar)
Source: ORCID
Added: August 16, 2023
2017 journal article
An Important Role for Purifying Selection in Archaeal Genome Evolution
MSystems, 2(5), e00112–17.
Ed(s): M. Rust
TL;DR:
This study suggests that purifying selection may play a more important role in archaeal genome evolution than previously hypothesized, indicating that there could be a major difference between the evolutionary regimes of Archaea and Bacteria.
(via Semantic Scholar)
Source: ORCID
Added: August 16, 2023
2017 journal article
Williamwhitmania taraxaci gen. nov., sp. nov., a proteolytic anaerobe with a novel type of cytology from Lake Untersee in Antarctica, description of Williamwhitmaniaceae fam. nov., and emendation of the order Bacteroidales Krieg 2012.
International Journal of Systematic and Evolutionary Microbiology, 9.
MeSH headings : Antarctic Regions; Bacterial Typing Techniques; Bacteroidetes / classification; Bacteroidetes / genetics; Bacteroidetes / isolation & purification; Base Composition; DNA, Bacterial / genetics; Fatty Acids / chemistry; Lakes / microbiology; Phylogeny; RNA, Ribosomal, 16S / genetics; Sequence Analysis, DNA; Vitamin K 2 / analogs & derivatives; Vitamin K 2 / chemistry
TL;DR:
Based on average nucleotide identity, average amino acid identity and phylogenetic analyses, the novel isolate was placed within a unique phylogenetic cluster distant from all eight families in the order Bacteroidales and formed a novel family with the proposed name Williamwhitmaniaceae fam.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 16, 2023
2017 journal article
Developing Career Self Efficacy through Biotechnology Industry Practicum Projects
The Innovator, 10(3), 19–23.
Sources: NC State University Libraries, ORCID
Added: February 14, 2023
2017 journal article
Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought.
Plant, Cell & Environment, 2.
author keywords: leaf growth regulation; mild drought response; time-course transcriptomics
MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Circadian Clocks / genetics; Droughts; Gene Expression Profiling; Gene Expression Regulation, Plant; Plant Leaves / genetics; Plant Leaves / growth & development; RNA, Messenger / genetics; RNA, Messenger / metabolism; Real-Time Polymerase Chain Reaction; Sequence Analysis, RNA; Stress, Physiological / genetics; Time Factors; Transcriptome / genetics
TL;DR:
It is found that growth and transcriptome responses to drought are highly dynamic and time of day strongly affected the extent, specificity, and in certain cases even direction of drought-induced changes in gene expression.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
Source: ORCID
Added: October 21, 2022
2017 dataset
E-MTAB-6209 - The expression profiles of 30 transcription factors in 17 inducible gain-of-function lines after activation of overexpression, including 5 time points
https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-6209
Source: ORCID
Added: October 21, 2022
2017 dataset
E-MTAB-6205 - The expression profiles of 31 transcription factors in wild-type Col-0 plants upon mild osmotic stress, including 10 time points and different leaf tissues
https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-6205
Source: ORCID
Added: October 21, 2022
2017 journal article
From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress
Molecular Systems Biology, 13(12), 961.
author keywords: growth regulation; mild osmotic stress; short-term stress response; transcription factors; transcriptional network
MeSH headings : Adaptation, Physiological / drug effects; Adaptation, Physiological / genetics; Arabidopsis / drug effects; Arabidopsis / genetics; Gene Expression Profiling; Gene Expression Regulation, Plant / drug effects; Gene Regulatory Networks / drug effects; Genes, Plant; Gibberellins / biosynthesis; Gibberellins / metabolism; Mannitol / pharmacology; Osmotic Pressure / physiology; Phenotype; Plant Leaves / drug effects; Plant Leaves / genetics; Plant Leaves / growth & development; Plants, Genetically Modified; Stochastic Processes; Stress, Physiological / drug effects; Stress, Physiological / genetics; Transcription Factors / metabolism; Transcription, Genetic / drug effects
TL;DR:
This study investigated a complex, highly interconnected network of 20 Arabidopsis transcription factors at the basis of leaf growth inhibition upon mild osmotic stress, resulting in the identification of a core network, composed of ERF6, ERF8, ERf9,ERF59, and ERF98, which is responsible for most transcriptional connections.
(via Semantic Scholar)
Source: ORCID
Added: October 21, 2022
2017 journal article
Genome Surfing As Driver of Microbial Genomic Diversity
Trends in Microbiology, 25(8), 624–636.
MeSH headings : Gene Transfer, Horizontal; Genetic Variation; Genome, Microbial; Genomics; Models, Genetic; Phylogeny; Streptomyces / genetics
TL;DR:
It is proposed that demographic range expansion of a microbial population capable of horizontal gene exchange can result in genome surfing, a mechanism that can cause widespread increase in the pan-genome frequency of genes acquired by horizontal gene Exchange.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(OpenAlex)
Source: ORCID
Added: September 18, 2022
2017 journal article
Casein Kinase 1 Coordinates Cohesin Cleavage, Gametogenesis, and Exit from M Phase in Meiosis II
Developmental Cell, 40(1), 37–52.
Contributors: O. Argüello-Miranda* , I. Zagoriy *, V. Mengoli*, J. Rojas *, K. Jonak *, T. Oz *, P. Graf*, W. Zachariae *
MeSH headings : Anaphase; Casein Kinase I / metabolism; Cell Cycle Proteins / metabolism; Cell Nucleus / metabolism; Centromere / metabolism; Chromosomal Proteins, Non-Histone / metabolism; Gametogenesis; Meiosis; Phosphorylation; Protein Phosphatase 2 / metabolism; Proteolysis; Saccharomyces cerevisiae / cytology; Saccharomyces cerevisiae / metabolism; Saccharomyces cerevisiae Proteins / metabolism; Separase / metabolism; Spindle Apparatus / metabolism
TL;DR:
Hrr25 synchronizes formation of the single-copy genome with gamete differentiation and termination of meiosis, and mediates exit from meiosis II by activating pathways that trigger the destruction of M-phase-promoting kinases.
(via Semantic Scholar)
Source: ORCID
Added: July 11, 2022
2017 journal article
Towards a Unified Understanding of Lithium Action in Basic Biology and its Significance for Applied Biology
Journal of Membrane Biology, 250(6), 587–604.
Contributors: E. Jakobsson *, O. Argüello-Miranda* , S. Chiu*, Z. Fazal *, J. Kruczek*, S. Nunez-Corrales *, S. Pandit *, L. Pritchet*
author keywords: Ion channels and transporters; Magnesium-dependent enzymes; Physical properties of biological membranes
MeSH headings : Enzymes / metabolism; Ion Channels / metabolism; Lithium / metabolism; Magnesium / metabolism
TL;DR:
This review will consider what is known about the nature of lithium exerts its myriad physiological and biochemical effects by competing for macromolecular sites that are relatively specific for other cations and suggest using and extending this knowledge towards the goal of a unified understanding of lithium in biology and the application of that understanding in medicine and nutrition.
(via Semantic Scholar)
Source: ORCID
Added: July 11, 2022
2017 conference paper
Effects of culture medium on growth and gene expression in the plant pathogen Mycosphaerella fijiensis
Presented at the 26th Annual NC State University Spring Undergraduate Research Symposium, Raleigh, NC.
Event: 26th Annual NC State University Spring Undergraduate Research Symposium at Raleigh, NC
Source: NC State University Libraries
Added: May 21, 2022
2017 conference paper
Assessment of key genes in Cercospora nicotianae that encode resistance to cercosporin
Presented at the 26th Annual NC State University Spring Undergraduate Research Symposium, Raleigh, NC.
Event: 26th Annual NC State University Spring Undergraduate Research Symposium at Raleigh, NC
Source: NC State University Libraries
Added: May 21, 2022
2017 journal article
Population Structure of Pseudocercospora fijiensis in Costa Rica Reveals Shared Haplotype Diversity with Southeast Asian Populations
Phytopathology®.
MeSH headings : Ascomycota / genetics; Ascomycota / isolation & purification; Asia, Southeastern; Costa Rica; Genetic Variation; Genetics, Population; Genotype; Haplotypes; Musa / microbiology; Phylogeography; Plant Diseases / microbiology; Sequence Analysis, DNA
TL;DR:
The data indicate that the haplotypic diversity observed in Costa Rican populations of P. fijiensis is derived from dispersal from initial outbreak sources in Honduras and admixtures between genetically differentiated sources from Southeast Asia, Oceania, and the Americas.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Source: ORCID
Added: March 11, 2022
2017 report
Translation regulation of uORFs-containing genes in Arabidopsis
Source: NC State University Libraries
Added: October 14, 2021
2017 journal article
Metabolic and physiological interdependencies in the Bathymodiolus azoricus symbiosis
The ISME Journal, 11(2), 463–477.
MeSH headings : Animals; Biosynthetic Pathways; Gammaproteobacteria / physiology; Gills / microbiology; Hydrothermal Vents; Methane / metabolism; Mytilidae / genetics; Mytilidae / microbiology; Oxidation-Reduction; Proteome; Species Specificity; Sulfur / metabolism; Symbiosis
TL;DR:
This study used a combination of proteomics and genomics to investigate the physiology and metabolism of the individual symbiotic partners of the hydrothermal vent mussel B. azoricus and its symbionts and identified numerous ‘symbiosis-specific’ host proteins that are likely involved in symbiont digestion and carbon transfer from the symbionte to the host.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 9, 2021
2017 article
Normalization of metatranscriptomic and metaproteomic data for differential gene expression analyses: The importance of accounting for organism abundance
Kleiner, M. (2017, March 2). (Vol. 3). Vol. 3.
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Source: ORCID
Added: August 9, 2021
2017 journal article
COMPUESTOS BIOACTIVOS Y ACTIVIDAD ANTIOXIDANTE DE SEMILLAS DE QUINUA PERUANA (Chenopodium quinoa W.)
Revista De La Sociedad Química Del Perú. https://www.redalyc.org/articulo.oa?id=371951877003
Contributors: Z. Valencia, F. Cámara, K. Ccapa, P. Catacora & F. Quispe
Source: ORCID
Added: July 11, 2021
2017 journal article
Interaction Rewiring and the Rapid Turnover of Plant-Pollinator Networks
Ecology Letters, 20(3), 385–394.
Ed(s): F. Jordan
author keywords: Adaptive foraging; beta-diversity; community composition; food webs; interaction turnover; mutualism; networks; null models; optimal foraging theory; phenology
MeSH headings : Animals; Birds / physiology; Colorado; Feeding Behavior; Insecta / physiology; Magnoliopsida / physiology; Pollination; Seasons; Species Specificity
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Source: ORCID
Added: March 4, 2021
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