Recent Works

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Sorted by most recent date added to the index first, which may not be the same as publication date order.

2025 article

Circular RNAs in Lotus japonicus Responses to Nutrient Supply and Symbiotic Interactions

Utley, D., Budnick, A., Radutoiu, S., & Sederoff, H. (2025, September 3).

By: D. Utley, A. Budnick, S. Radutoiu & H. Sederoff

topics (OpenAlex):
Source: ORCID
Added: September 3, 2025

2025 article

Circular RNAs in Lotus japonicus Responses to Nutrient Supply and Symbiotic Interactions

Utley, D., Budnick, A., Radutoiu, S., & Sederoff, H. (2025, September 1).

By: D. Utley, A. Budnick, S. Radutoiu & H. Sederoff

topics (OpenAlex):
Source: ORCID
Added: September 1, 2025

2025 journal article

Yeast Surface Display of Protein Addresses Confers Robust Storage and Access of DNA-Based Data

DNA.

By: M. Lee n, G. Brihadiswaran n, B. Rao n, J. Tuck n & A. Keung n

topics (OpenAlex): DNA and Biological Computing; Genomics and Chromatin Dynamics; Gene expression and cancer classification
Source: ORCID
Added: July 11, 2025

2025 journal article

From bench to business: translating academic advances into industry innovations

DEVELOPMENT, 152(13).

co-author countries: Israel 🇮🇱
MeSH headings : Humans; Intellectual Property; Biotechnology; Translational Research, Biomedical; Industry; Patents as Topic
topics (OpenAlex): Birth, Development, and Health
Sources: ORCID, Web Of Science, NC State University Libraries
Added: July 10, 2025

2025 journal article

<i>In vitro</i> demonstration and <i>in planta</i> characterization of a condensed, reverse TCA (crTCA) cycle

FRONTIERS IN PLANT SCIENCE, 16.

By: N. Wilson n, C. Smith-Moore, Y. Xu*, B. Edwards n, C. La Hovary n, K. Li n, D. Aslett n, M. Ji n ...

author keywords: photosynthesis; CO2 fixation; synthetic biology; Camelina sativa; reverse TCA cycle; carbon capture
topics (OpenAlex): Plant tissue culture and regeneration; Plant Virus Research Studies; Plant Pathogens and Resistance
Sources: Web Of Science, NC State University Libraries
Added: June 30, 2025

2025 article

Heat shock proteins function as signaling molecules to mediate neuron-glia communication in <i>C. elegans</i> during aging

Wu, J., Yarmey, V. R., Yang, O. J., Soderblom, E. J., San-Miguel, A., & Yan, D. (2025, June 18). NATURE NEUROSCIENCE, Vol. 6.

topics (OpenAlex): Genetics, Aging, and Longevity in Model Organisms; Heat shock proteins research; Circadian rhythm and melatonin
Sources: Web Of Science, NC State University Libraries
Added: June 23, 2025

2025 review

Microfluidic and Computational Tools for Neurodegeneration Studies

[Review of ]. ANNUAL REVIEW OF CHEMICAL AND BIOMOLECULAR ENGINEERING, 16, 195–216.

author keywords: neurodegeneration; microfluidics; computational tools; disease modeling; brain-on-a-chip; biomarkers
MeSH headings : Neurodegenerative Diseases / diagnosis; Neurodegenerative Diseases / metabolism; Neurodegenerative Diseases / pathology; Neurodegenerative Diseases / genetics; Humans; Animals; Machine Learning; Microfluidic Analytical Techniques / methods; Microfluidic Analytical Techniques / instrumentation; Biomarkers / analysis; Biomarkers / metabolism; Microfluidics / methods; Proteomics; Brain / metabolism; Brain / pathology; Computational Biology / methods
topics (OpenAlex): 3D Printing in Biomedical Research
Sources: Web Of Science, NC State University Libraries
Added: June 23, 2025

2025 journal article

Loss of <i>UBE3A</i> impacts both neuronal and non-neuronal cells in human cerebral organoids

COMMUNICATIONS BIOLOGY, 8(1).

MeSH headings : Humans; Organoids / metabolism; Organoids / cytology; Ubiquitin-Protein Ligases / genetics; Ubiquitin-Protein Ligases / metabolism; Neurons / metabolism; Angelman Syndrome / genetics; Angelman Syndrome / metabolism
topics (OpenAlex): Pluripotent Stem Cells Research; Renal and related cancers; Genetics and Neurodevelopmental Disorders
Sources: ORCID, Web Of Science, NC State University Libraries
Added: May 30, 2025

2025 journal article

Amyloid β induces hormetic-like effects through major stress pathways in a <i>C. elegans</i> model of Alzheimer's Disease

PLOS ONE, 20(4).

Ed(s): N. Tavernarakis

MeSH headings : Caenorhabditis elegans / metabolism; Caenorhabditis elegans / genetics; Animals; Amyloid beta-Peptides / metabolism; Amyloid beta-Peptides / genetics; Alzheimer Disease / metabolism; Alzheimer Disease / genetics; Alzheimer Disease / pathology; Disease Models, Animal; Humans; Oxidative Stress; Stress, Physiological; Caenorhabditis elegans Proteins / metabolism; Caenorhabditis elegans Proteins / genetics; Hormesis; Signal Transduction; Neurons / metabolism; Heat-Shock Proteins / metabolism; Heat-Shock Proteins / genetics; Neuropeptides / metabolism
topics (OpenAlex): Genetics, Aging, and Longevity in Model Organisms; Circadian rhythm and melatonin; Tryptophan and brain disorders
Sources: ORCID, Web Of Science
Added: April 24, 2025

2025 journal article

Large-scale comparative wheat phosphoproteome profiling reveals temperature-associated molecular signatures in wheat

PLANT PHYSIOLOGY, 197(4).

co-author countries: Belgium 🇧🇪
MeSH headings : Triticum / metabolism; Triticum / genetics; Triticum / physiology; Plant Proteins / metabolism; Plant Proteins / genetics; Proteome / metabolism; Phosphoproteins / metabolism; Phosphoproteins / genetics; Phosphorylation; Temperature; Proteomics; Gene Expression Regulation, Plant
topics (OpenAlex): Plant responses to elevated CO2; Lipid metabolism and biosynthesis; Plant Stress Responses and Tolerance
Sources: ORCID, Web Of Science, NC State University Libraries
Added: April 24, 2025

2025 journal article

Transdisciplinary Collaborations for Advancing Sustainable and Resilient Agricultural Systems

GLOBAL CHANGE BIOLOGY, 31(4).

By: V. Bacheva*, I. Madison n, M. Baldwin*, J. Baker n, M. Beilstein*, D. Call n, J. Deaver n, K. Efimenko n ...

co-author countries: Türkiye 🇹🇷

Contributors: V. Bacheva*, I. Madison n, M. Baldwin*, J. Baker n, M. Beilstein*, D. Call n, J. Deaver n, K. Efimenko n ...

author keywords: agriculture; fertilizer management; food security; stakeholder engagement; transdisciplinary collaborations; water resource management
MeSH headings : Agriculture / methods; Fertilizers; Interdisciplinary Research; Climate Change; Conservation of Natural Resources / methods; Sustainable Development; Interdisciplinary Communication
topics (OpenAlex): Plant nutrient uptake and metabolism; Wastewater Treatment and Nitrogen Removal; Constructed Wetlands for Wastewater Treatment
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: April 14, 2025

2025 journal article

Derivation of human trophoblast stem cells from placentas at birth

JOURNAL OF BIOLOGICAL CHEMISTRY, 301(6).

By: V. Karakis n, J. Britt n, M. Jabeen n, A. San Miguel n & B. Rao n

topics (OpenAlex): Pregnancy and preeclampsia studies; Prenatal Screening and Diagnostics; Epigenetics and DNA Methylation
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: April 10, 2025

2025 journal article

A high sensitivity assay of UBE3A ubiquitin ligase activity

METHODS, 235, 92–99.

By: L. Han n, Z. Yagci n & A. Keung n

author keywords: Biochemical assay; Neurodevelopmental disorder; Therapeutic endpoint; Biomarker; Angelman Syndrome; Autism Spectrum Disorder; Dup15q Syndrome
MeSH headings : Ubiquitin-Protein Ligases / metabolism; Ubiquitin-Protein Ligases / genetics; Humans; Tumor Suppressor Protein p53 / metabolism; Tumor Suppressor Protein p53 / genetics; Ubiquitination; Animals; Mice; Substrate Specificity; Enzyme Assays / methods
topics (OpenAlex): Ubiquitin and proteasome pathways; Protein Degradation and Inhibitors; Genetics and Neurodevelopmental Disorders
Sources: Web Of Science, NC State University Libraries
Added: March 3, 2025

2025 review

Advancing plant science through precision 3D bioprinting: new tools for research and biotech applications

[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 91.

co-author countries: Spain 🇪🇸
MeSH headings : Bioprinting / methods; Biotechnology / methods; Printing, Three-Dimensional; Plants / metabolism
topics (OpenAlex): 3D Printing in Biomedical Research; Microfluidic and Bio-sensing Technologies; Electrowetting and Microfluidic Technologies
Sources: Web Of Science, NC State University Libraries
Added: February 17, 2025

2025 journal article

Nanopore decoding with speed and versatility for data storage

BIOINFORMATICS, 41(1).

MeSH headings : Nanopores; Algorithms; DNA / chemistry; RNA / chemistry; Information Storage and Retrieval / methods; Nanopore Sequencing / methods; Sequence Analysis, DNA / methods
topics (OpenAlex): DNA and Biological Computing; Advanced biosensing and bioanalysis techniques; Algorithms and Data Compression
Sources: Web Of Science, NC State University Libraries
Added: February 10, 2025

2025 journal article

Pickering Emulsion for Enhanced Viability of Plant Growth Promoting Bacteria and Combined Delivery of Agrochemicals and Biologics

Advanced Functional Materials, 2.

By: M. Sohail n, J. Cheadle n, R. Khan n, H. Mane n, K. Samaher Salem n, K. Ernst n, A. San Miguel n, C. Opperman n ...

author keywords: biodegradable emulsifier; nonsporulating microbes; sustainable agriculture; multi-delivery platform
topics (OpenAlex): Pickering emulsions and particle stabilization; Biocrusts and Microbial Ecology; Algal biology and biofuel production
Sources: ORCID, Web Of Science, NC State University Libraries, Crossref
Added: February 5, 2025

2025 review

Advances in lignocellulosic feedstocks for bioenergy and bioproducts

[Review of ]. NATURE COMMUNICATIONS, 16(1).

MeSH headings : Lignin / metabolism; Biofuels; Gene Editing; Biotechnology / methods; Biomass; CRISPR-Cas Systems
topics (OpenAlex): Biofuel production and bioconversion; Bioenergy crop production and management; Catalysis for Biomass Conversion
Sources: ORCID, Web Of Science, NC State University Libraries
Added: February 1, 2025

2024 journal article

A quantitative image analysis platform for assessing trophoblast differentiation

PLACENTA, 166, 117–125.

Contributors: M. Jabeen n, V. Karakis n, J. Britt n, A. Miguel n & B. Rao n

author keywords: Trophoblast differentiation; Extravillous trophoblast; Syncytiotrophoblast; Human trophoblast stem cell; Image analysis; Immunofluorescence; Quantitative analysis; Confocal microscopy
topics (OpenAlex): Pregnancy and preeclampsia studies; Prenatal Screening and Diagnostics; Neonatal Respiratory Health Research
Sources: ORCID, Web Of Science, NC State University Libraries
Added: January 2, 2025

2024 article

Dorsal/NF-κB exhibits a dorsal-to-ventral mobility gradient in the Drosophila embryo

Asafen, H. A., Clark, N. M., Goyal, E., Jacobsen, T., Dima, S. S., Chen, H.-Y., … Reeves, G. T. (2024, December 19).

topics (OpenAlex): Cellular Mechanics and Interactions; Protein Tyrosine Phosphatases
Source: ORCID
Added: December 19, 2024

2024 article

Dorsal/NF-κB exhibits a dorsal-to-ventral mobility gradient in the Drosophila embryo

Asafen, H. A., Clark, N. M., Goyal, E., Jacobsen, T., Dima, S. S., Chen, H.-Y., … Reeves, G. T. (2024, December 19).

topics (OpenAlex): Cellular Mechanics and Interactions; Protein Tyrosine Phosphatases
Source: ORCID
Added: December 19, 2024

2024 article

Advancing our understanding of root development: Technologies and insights from diverse studies

Coll, N. S., Moreno-Risueno, M., Strader, L. C., Goodnight, A. V., & Sozzani, R. (2024, December 17). PLANT PHYSIOLOGY, Vol. 12.

co-author countries: Spain 🇪🇸
MeSH headings : Plant Roots / growth & development; Plant Roots / genetics; Single-Cell Analysis / methods; Gene Regulatory Networks; Plant Development / genetics; Sequence Analysis, RNA
topics (OpenAlex): Single-cell and spatial transcriptomics; Plant nutrient uptake and metabolism; Soil Moisture and Remote Sensing
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
13. Climate Action (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: December 17, 2024

2024 article

Camelina circRNA landscape: Implications for gene regulation and fatty acid metabolism

Utley, D., Edwards, B., Budnick, A., Grotewold, E., & Sederoff, H. (2024, December 10). PLANT GENOME, Vol. 12.

MeSH headings : RNA, Circular / genetics; Gene Expression Regulation, Plant; Fatty Acids / metabolism; Brassicaceae / genetics; Brassicaceae / metabolism; RNA, Plant / genetics; RNA, Plant / metabolism; Lipid Metabolism / genetics; Alternative Splicing
topics (OpenAlex): Circular RNAs in diseases; Lipid metabolism and biosynthesis; Adipose Tissue and Metabolism
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: December 10, 2024

2024 report

Transdisciplinary collaborations for advancing sustainable and resilient agricultural systems

(ArXiv Preprint No. 2409.12337).

By: V. Bacheva, I. Madison, M. Baldwin, M. Beilstein, D. Call*, J. Deaver, K. Efimenko, J. Genzer ...

topics (OpenAlex): Sustainable Agricultural Systems Analysis
Sources: NC State University Libraries, NC State University Libraries, ORCID
Added: December 7, 2024

2024 dataset

Data from: Amyloid β induces hormetic-like effects through major stress pathways in a C. elegans model of Alzheimer’s disease

Dryad.

Contributors: J. Lichty, H. Mane, V. Yarmey & A. Miguel

topics (OpenAlex):
Source: ORCID
Added: December 5, 2024

2024 journal article

Triple Bottom Line Scenario Sites as Boundary Objects for Integrating Diverse Disciplines in Convergent Research

SUSTAINABILITY, 16(23).

author keywords: boundary objects; convergence research; ecosystems; phosphorus sustainability; transdisciplinarity
topics (OpenAlex): Innovative Approaches in Technology and Social Development; Complex Systems and Decision Making; Sustainability and Climate Change Governance
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: November 28, 2024

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