Works Published in 2009

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Displaying works 401 - 420 of 632 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2009 journal article

Analysis of Reaction-Diffusion Systems with Anomalous Subdiffusion

BIOPHYSICAL JOURNAL, 97(2), 435–442.

By: J. Haugh n

MeSH headings : Cell Membrane / metabolism; Diffusion; Fluorescence Recovery After Photobleaching; Models, Biological; Time Factors
TL;DR: Two simple, conceptually extreme models of anomalous subdiffusion are used in the framework of Green's functions to demonstrate the solution of four reaction-diffusion problems that are well known in the biophysical context of signal transduction: fluorescence recovery after photobleaching, the Smolochowski limit for diffusion- controlled reactions in solution, the spatial range of a diffusing molecule with finite lifetime, and the collision coupling mechanism of diffusion-controlled reactions in two dimensions. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2009 journal article

An autoregressive point source model for spatial processes

ENVIRONMETRICS, 20(5), 575–594.

Contributors: J. Hughes-Oliver n, T. Heo* & S. Ghosh n

author keywords: Bayesian inference; correlation nonstationarity; heterogeneity; hierarchical model; random effect; variance nonstationarity
TL;DR: Application is made to a real dataset on electric potential measurements in a field containing a metal pole and the finding is that the approach captures the pole's impact on small‐scale variability of the electric potential process. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2009 journal article

Altering and Assessing Persistence of Genetically Modified E. coli MG1655 in the Large Bowel

EXPERIMENTAL BIOLOGY AND MEDICINE, 234(10), 1174–1185.

By: A. Barbas n, A. Lesher n, A. Thomas n, A. Wyse n, A. Devalapalli n, Y. Lee n, H. Tan n, P. Orndorff n, R. Bollinger n, W. Parker n

author keywords: probiotics; pilus; immunoglobulin A
MeSH headings : Adhesins, Bacterial / genetics; Adhesins, Bacterial / metabolism; Animals; Bacterial Adhesion; Cecum / immunology; Cecum / metabolism; Escherichia coli K12 / genetics; Escherichia coli K12 / metabolism; Feces / microbiology; Female; Fimbriae, Bacterial / metabolism; Immunoglobulin A, Secretory / immunology; Immunoglobulin A, Secretory / metabolism; Intestinal Mucosa / immunology; Intestinal Mucosa / metabolism; Intestine, Large / immunology; Intestine, Large / metabolism; Mice; Mice, Inbred Strains; Probiotics / metabolism; Time Factors
TL;DR: Modifying expression of probiotic colonization factors may provide substantial benefit to patients with digestive tract diseases by virtue of increased persistence of the probiotic and, in the case of sIgA, an anti-inflammatory effect. (via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2009 journal article

A streamlined method for rapid and sensitive chromatin immunoprecipitation

JOURNAL OF IMMUNOLOGICAL METHODS, 344(1), 58–63.

author keywords: Chromatin immunoprecipitation; Histone; Epigenetics; cad; TEA; Thymocyte; Rag
MeSH headings : Animals; Aspartate Carbamoyltransferase / genetics; Aspartate Carbamoyltransferase / metabolism; Carbamoyl-Phosphate Synthase (Glutamine-Hydrolyzing) / genetics; Carbamoyl-Phosphate Synthase (Glutamine-Hydrolyzing) / metabolism; Cell Line; Chromatin / genetics; Chromatin / isolation & purification; Chromatin / metabolism; Chromatin Immunoprecipitation / methods; DNA-Binding Proteins / genetics; DNA-Binding Proteins / metabolism; Dihydroorotase / genetics; Dihydroorotase / metabolism; Gene Knockdown Techniques; Histones / genetics; Histones / metabolism; Mice; Mice, Knockout; RNA Polymerase II / genetics; RNA Polymerase II / metabolism; T-Lymphocytes / metabolism
TL;DR: A streamlined ChIP is reported to efficiently carry samples from chromatin to qPCR-compatible DNA in as little as 4 h and it is shown that the protocol readily quantified histone modifications in chromatin from 10(4) Rag-deficient DN thymocytes. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2009 journal article

A stochastic neighborhood conditional autoregressive model for spatial data

COMPUTATIONAL STATISTICS & DATA ANALYSIS, 53(8), 3033–3046.

By: G. White n & S. Ghosh n

Contributors: G. White n & S. Ghosh n

TL;DR: An extension of CAR model where the selection of the neighborhood depends on unknown parameter(s) is proposed, called a Stochastic Neighborhood CAR (SNCAR) model, which shows flexibility in accurately estimating covariance structures for data generated from a variety of spatial covariance models. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2009 journal article

A head in the clouds

Natural History Magazine, 118(6), 16-.

By: R. Dunn

Source: NC State University Libraries
Added: August 6, 2018

2009 conference paper

A confusing case of canine vector-borne disease: clinical signs and progression in a dog co-infected with Ehrlichia canis and Bartonella vinsonii ssp berkhoffii

Parasites & Vectors, 2.

Source: NC State University Libraries
Added: August 6, 2018

2009 journal article

A Case for Characterizing Polymers with the Kerr Effect

MACROMOLECULES, 42(12), 3830–3840.

By: A. Tonelli n

UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2009 journal article

Utilizing Artificial Neural Networks in MATLAB to Achieve Parts-Per-Billion Mass Measurement Accuracy with a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 20(7), 1303–1310.

By: D. Williams n, A. Kovach n, D. Muddiman n & K. Hanck n

MeSH headings : Fourier Analysis; Linear Models; Mass Spectrometry / methods; Models, Theoretical; Neural Networks, Computer; Reproducibility of Results; Sensitivity and Specificity
TL;DR: Artificial neural network calibration in conjunction with automatic gain control (AGC) is utilized in these experiments to formally account for the differences in total ion population in the ICR cell between the external calibration spectra and experimental spectra. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 review

Update on Genomics in Veterinary Oncology

[Review of ]. TOPICS IN COMPANION ANIMAL MEDICINE, 24(3), 113–121.

By: M. Breen n

author keywords: cancer; genomics; oncology; technology; veterinary
MeSH headings : Animals; Cat Diseases / genetics; Cats; Dog Diseases / genetics; Dogs; Genomics / methods; Neoplasms / genetics; Neoplasms / veterinary; Veterinary Medicine / methods
TL;DR: The release of an annotated human genome sequence assembly and the emergence of genomics technologies have led to significant advances in the authors' understanding of many human diseases including cancers. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2009 journal article

The Design and Testing of a Dual Fiber Textile Matrix for Accelerating Surface Hemostasis

JOURNAL OF BIOMEDICAL MATERIALS RESEARCH PART B-APPLIED BIOMATERIALS, 91B(1), 381–389.

By: T. Fischer*, J. Vournakis*, J. Manning*, S. McCurdy*, P. Rich*, T. Nichols*, C. Scull*, M. McCord n ...

author keywords: Surface hemostasis; platelets; intrinsic coagulation; red blood cell agglutination
MeSH headings : Adult; Animals; Blood Coagulation; Blood Proteins / chemistry; Hemorrhage / therapy; Hemostasis; Hemostatics; Humans; Textiles; Thrombelastography; Thrombin / metabolism
TL;DR: The results indicate that hemostatic textiles can be designed that mimic gauze in form but surpass gauzes in ability to accelerate he mostatic reactions. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 review

Targeting cancer with 'smart bombs': equipping plant virus nanoparticles for a 'seek and destroy' mission

[Review of ]. NANOMEDICINE, 4(5), 575–588.

By: S. Franzen n & S. Lommel n

author keywords: biodegradable; capsid; chemotherapy; colloid; nanoparticle plant virus; receptor-mediated endocytosis; reticuloendothelial system
MeSH headings : Endocytosis; Humans; Liposomes; Micelles; Nanoparticles; Neoplasms / drug therapy; Plant Viruses
TL;DR: The structural uniformity, cargo capacity, responsive behavior and ease of manufacturing of plant virus nanoparticles are unique properties that suggest they have a wider role to play in targeted therapy, and they are considered to have the most promise to address these complex phenomena. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 journal article

Tandem Mass Spectrometry of Thiolate-Protected Au Nanoparticles NaxAu25(SC2H4Ph)(18-y)(S(C2H4O)(5)CH3)(y)

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 131(38), 13844–13851.

By: C. Fields-Zinna n, J. Sampson n, M. Crowe n, J. Tracy n, J. Parker n, A. deNey n, D. Muddiman n, R. Murray n

MeSH headings : Crystallography, X-Ray; Gold / chemistry; Metal Nanoparticles / chemistry; Sulfhydryl Compounds / chemistry; Tandem Mass Spectrometry
TL;DR: The first collision-induced dissociation tandem mass spectrometry (CID MS/MS) of a thiolate-protected Au nanoparticle that has a crystallographically determined structure is reported, and previously unreported results show that even soft ionization sources can result in Au nanoparticles fragmentation. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 journal article

Solitary Intracerebral Plasmacytoma in a Dog: Microscopic, Immunohistochemical, and Molecular Features

Veterinary Pathology, 46(5), 949–951.

author keywords: Brain neoplasia; canine; dogs; immunohistochemistry; plasma cell tumor; plasmacytoma; PCR
MeSH headings : Animals; Brain Neoplasms / pathology; Brain Neoplasms / veterinary; Dog Diseases / pathology; Dogs; Fatal Outcome; Female; Histocytochemistry / veterinary; Plasmacytoma / pathology; Plasmacytoma / veterinary; Seizures / pathology; Seizures / veterinary
TL;DR: Although primary solitary intracerebral plasmacytoma is rare in dogs and other species, it should be included in the differential diagnosis for central nervous system round-cell neoplasms. (via Semantic Scholar)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018

2009 review

Rotavirus and Reovirus Modulation of the Interferon Response

[Review of ]. JOURNAL OF INTERFERON AND CYTOKINE RESEARCH, 29(9), 559–567.

By: B. Sherry n

MeSH headings : Active Transport, Cell Nucleus; Animals; Humans; Interferon Regulatory Factors / immunology; Interferon Regulatory Factors / metabolism; Interferon Type I / genetics; Interferon Type I / immunology; Interferon Type I / metabolism; Interferon-Stimulated Gene Factor 3 / immunology; Interferon-Stimulated Gene Factor 3 / metabolism; NF-kappa B / metabolism; RNA Helicases / immunology; RNA Helicases / metabolism; Rotavirus / immunology; Rotavirus / pathogenicity; Rotavirus Infections / genetics; Rotavirus Infections / immunology; Rotavirus Infections / virology; STAT Transcription Factors / metabolism; Signal Transduction; Viral Nonstructural Proteins / immunology; Viral Nonstructural Proteins / metabolism; Virulence
TL;DR: Members of the family Reoviridae have evolved a variety of mechanisms to subvert the host's innate protective response. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2009 personal communication

Research on mesothelioma from brake exposure: Corporate influence remains relevant concern

By: L. Welch, H. Anderson, J. Balmes, L. Braun, A. Brody, B. Castleman, D. Davis, J. Dement ...

Source: NC State University Libraries
Added: August 6, 2018

2009 journal article

Quantitative Glycomics from Fluidic Glycan Microarrays

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 131(38), 13646–13650.

By: X. Zhu n, B. Holtz n, Y. Wang n, L. Wang n, P. Orndorff n & A. Guo n

MeSH headings : Adhesins, Escherichia coli / chemistry; Adhesins, Escherichia coli / metabolism; Bacterial Adhesion; Cell Membrane / chemistry; Cell Membrane / metabolism; Cell Membrane / physiology; Escherichia coli / chemistry; Escherichia coli / physiology; Fimbriae Proteins / chemistry; Fimbriae Proteins / metabolism; Glycomics / methods; Mannose / chemistry; Mannose / metabolism; Microarray Analysis / methods; Microfluidic Analytical Techniques; Polysaccharides / analysis; Polysaccharides / metabolism
TL;DR: The results reveal a new E. coli adhesion mechanism: the switching in the FimH adhesion protein avidity from monovalent to multivalent as the density of mobile mannosyl groups increases; such avidity switching enhances binding affinity and triggers multiple fimbriae anchoring. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2009 journal article

Proteomics Characterization of Cell Membrane Blebs in Human Retinal Pigment Epithelium Cells

MOLECULAR & CELLULAR PROTEOMICS, 8(10), 2201–2211.

By: O. Alcazar, A. Hawkridge n, T. Collier n, S. Cousins*, S. Bhattacharya*, D. Muddiman n, M. Marin-Castano*

MeSH headings : Aged; Animals; Antioxidants / pharmacology; Basigin / analysis; Cell Line; Cell Membrane / chemistry; Cell Membrane / drug effects; Cell Membrane / ultrastructure; Cell Surface Extensions / chemistry; Cell Surface Extensions / drug effects; Cell Surface Extensions / ultrastructure; Chromatography, Liquid; Electrophoresis, Gel, Two-Dimensional; Electrophoresis, Polyacrylamide Gel; Epithelial Cells / chemistry; Epithelial Cells / cytology; Epithelial Cells / drug effects; Extracellular Matrix / chemistry; Extracellular Matrix / metabolism; Eye Proteins / analysis; Humans; Hydroquinones / pharmacology; Macular Degeneration / pathology; Matrix Metalloproteinase 14 / analysis; Matrix Metalloproteinase 2 / analysis; Molecular Sequence Data; Proteomics / methods; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Retinal Pigment Epithelium / chemistry; Retinal Pigment Epithelium / cytology; Smoke; Smoking / adverse effects; Tandem Mass Spectrometry; Tobacco / chemistry
TL;DR: Basigin and matrix metalloproteinase-14, key proteins involved in extracellular matrix remodeling, were identified in RPE blebs and shown to be more prevalent in AMD patients. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 journal article

Promoter activity 5 ' of D beta 2 is coordinated by E47, Runx1, and GATA-3

MOLECULAR IMMUNOLOGY, 46(15), 3009–3017.

By: R. McMillan n & M. Sikes n

author keywords: T cell receptor; Transcription; V(D)J recombination; Thymocytes; Double negative; E47; GATA-3; Runx1
MeSH headings : Animals; Base Sequence; Cell Differentiation / immunology; Cell Line; Chromatin / immunology; Chromatin / metabolism; Core Binding Factor Alpha 2 Subunit / immunology; Core Binding Factor Alpha 2 Subunit / metabolism; GATA3 Transcription Factor / immunology; GATA3 Transcription Factor / metabolism; Gene Rearrangement, beta-Chain T-Cell Antigen Receptor; Homeodomain Proteins / genetics; Homeodomain Proteins / immunology; Homeodomain Proteins / metabolism; Mice; Mice, Knockout; Molecular Sequence Data; Promoter Regions, Genetic; Receptors, Antigen, T-Cell, alpha-beta / genetics; T-Lymphocytes / immunology; T-Lymphocytes / metabolism; TCF Transcription Factors / immunology; TCF Transcription Factors / metabolism; Thymus Gland / immunology; Thymus Gland / metabolism; Transcription Factor 7-Like 1 Protein; Tumor Suppressor Protein p53 / genetics; Tumor Suppressor Protein p53 / immunology; Tumor Suppressor Protein p53 / metabolism; Upstream Stimulatory Factors / immunology; Upstream Stimulatory Factors / metabolism
TL;DR: The dependence of 5'PDbeta2 on E47 is consistent with the reported role of E proteins in post-DN1 thymocyte development and V-to-DJbeta recombination and a complex interplay among Runx1, GATA-3, and E47 transcription factors. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2009 journal article

Plasmonic phenomena in indium tin oxide and ITO-Au hybrid films

OPTICS LETTERS, 34(18), 2867–2869.

TL;DR: The observation of surface-plasmon resonances in indium tin oxide (ITO) thin films is complemented with the effects of hybrid ITO/Au conducting layers where charge densities can be tuned. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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