Molecular Education, Technology and Research Innovation Center

Works Published in 2016

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Displaying works 41 - 49 of 49 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2016 journal article

Structural comparison of suberanilohydroxamic acid (SAHA) and other zinc-enzyme inhibitors bound to a monomeric zinc species

POLYHEDRON, 114, 344–350.

author keywords: Biomimetic zinc; Tris-pyrazolyl borate ligands; Zinc enzyme structural mimics; Zinc binding groups; Hydroxamic acids
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2016 journal article

Identification of Epigenetic Factor Proteins Expressed in Human Embryonic Stem Cell-Derived Trophoblasts and in Human Placental Trophoblasts

JOURNAL OF PROTEOME RESEARCH, 15(8), 2433–2444.

By: P. Sarkar n, A. Mischler n, S. Randall n, T. Collier n, K. Dorman*, K. Boggess*, D. Muddiman n, B. Rao n

author keywords: quantitative mass spectrometry; SILAC; human embryonic stem cell; trophoblast; epigenetic factor
MeSH headings : Cell Differentiation; DNA (Cytosine-5-)-Methyltransferases / genetics; Epigenomics; Female; Gene Expression / genetics; Human Embryonic Stem Cells / cytology; Humans; Placenta / chemistry; Placenta / cytology; Pregnancy; Transcription Factors / genetics; Trophoblasts / chemistry; Trophoblasts / cytology
TL;DR: The results support the use of hESC-derived trophoblasts as a model for placental troPHoblasts, which will enable further investigation of epigenetic factors involved in human trophoblast development, and hypothesized that nuclear proteomics of h ESPCs may be used for screening epigenetic factor proteins expressed by primary trophblasts in human placental tissue. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2016 journal article

Composition of Rosenthal Fibers, the Protein Aggregate Hallmark of Alexander Disease

JOURNAL OF PROTEOME RESEARCH, 15(7), 2265–2282.

By: M. Heaven, D. Flint, S. Randall n, A. Sosunov, L. Wilson, S. Barnes, J. Goldman, D. Muddiman n, M. Brenner

author keywords: Rosenthal fiber; Alexander disease; protein aggregates; neurodegenerative disease; astrocyte; proteomics; mass spectrometry (MS); stress granules
MeSH headings : Alexander Disease; Animals; Astrocytes; Cyclin D2 / analysis; DEAD-box RNA Helicases / analysis; GTP-Binding Proteins / analysis; Humans; Immunohistochemistry; Mice; Neoplasm Proteins / analysis; Neuropeptides / analysis; Protein Aggregates; Protein Aggregation, Pathological; Proteome / analysis; RNA Helicases / analysis; Receptors for Activated C Kinase; Receptors, Cell Surface / analysis
TL;DR: No support was obtained for the sequestration hypothesis for AxD, but the association of several of the RF proteins with stress granules suggests a role for stressgranules in the origin of RFs. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2016 journal article

A Quantitative Glycomics and Proteomics Combined Purification Strategy

Journal of Visualized Experiments, 3(109).

By: E. Hecht n, J. McCord n & D. Muddiman n

author keywords: Chemistry; Issue 109; Glycomics; proteomics; glycosylation-site analysis; deamidation; hydrazide tagging; relative quantitation
MeSH headings : Animals; Chickens; Chromatography, Liquid / methods; Glycomics / methods; Glycopeptides / analysis; Glycopeptides / blood; Glycosylation; Humans; Mass Spectrometry / methods; Peptides / analysis; Peptides / blood; Polysaccharides / analysis; Polysaccharides / blood; Protein Processing, Post-Translational; Proteins / analysis; Proteomics / methods; Solid Phase Extraction / methods; Swine
TL;DR: A new in-line high-throughput, unbiased, filter based protocol for quantitative glycomics and proteomics analysis and showed that N-glycans purified on filter and derivatized by hydrophobic hydrazide tags were comparable in terms of abundance and class to those by solid phase extraction (SPE); the latter is considered a gold standard in the field. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries, NC State University Libraries
Added: August 6, 2018

2016 article

What if you could only publish 50 papers your entire career?

Muddiman, D. C. (2016, January). ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 408, pp. 663–664.

By: D. Muddiman n

TL;DR: Though this shift to the highest publishable unit (HPU) will not mean every paper is a blockbuster, it would guarantee that each manuscript fulfills one or more of three goals: Regardless of journal type or impact factor, each manuscript should detail a complete and significant study. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2016 journal article

Wall modified photonic crystal fibre capillaries as porous layer open tubular columns for in-capillary micro-extraction and capillary chromatography

ANALYTICA CHIMICA ACTA, 905, 1–7.

By: A. Kazarian n, E. Rodriguez*, J. Deverell*, J. McCord n, D. Muddiman n & B. Paull*

author keywords: Polymer monolith; Porous layer open tubular column; Fused silica photonic crystal fibres; In-capillary extraction; Bioseparations
MeSH headings : Chromatography, Liquid / instrumentation; Chromatography, Liquid / methods; Equipment Design; Photons; Porosity; Reproducibility of Results; Spectrometry, Fluorescence
TL;DR: The modified multi-channel capillaries were applied to the in-capillary micro-extraction of water samples, proving chromatographic potential of the new column format, with run-to-run retention time reproducibility of below 1%. (via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2016 journal article

Polarity switching mass spectrometry imaging of healthy and cancerous hen ovarian tissue sections by infrared matrix-assisted laser desorption electrospray ionization (IR-MALDESI)

ANALYST, 141(2), 595–605.

MeSH headings : Animals; Chickens; Female; Infrared Rays; Molecular Imaging / methods; Ovarian Neoplasms / diagnostic imaging; Ovarian Neoplasms / pathology; Ovary / cytology; Ovary / diagnostic imaging; Ovary / pathology; Solvents / chemistry; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods
TL;DR: In order to obtain a comprehensive metabolite and lipid data, a polarity switching MSI method using infrared matrix assisted laser desorption electrospray ionization (IR-MALDESI) was developed and optimized where the electrosPRay polarity was alternated from one voxel to the next. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2016 journal article

A Periodic Walk through a Series of First-Row, Oxido-Bridged, Heterodimetallic Molecules: Synthesis and Structure

EUROPEAN JOURNAL OF INORGANIC CHEMISTRY, 2016(7), 1054–1059.

author keywords: Heterometallic complexes; Cyclic voltammetry; Donor-acceptor systems; Electronic structure; Jahn-Teller distortion
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2016 journal article

Analysis of Antiretrovirals in Single Hair Strands for Evaluation of Drug Adherence with Infrared-Matrix-Assisted Laser Desorption Electrospray Ionization Mass Spectrometry Imaging

ANALYTICAL CHEMISTRY, 88(2), 1336–1344.

By: E. Rosen*, C. Thompson*, M. Bokhart n, H. Prince*, C. Sykes*, D. Muddiman n, A. Kashuba*

MeSH headings : Anti-Retroviral Agents / analysis; Hair / chemistry; Infrared Rays; Molecular Structure; Optical Imaging; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
TL;DR: Evaluated the detectability of HIV antiretrovirals in hair from a range of drug classes using infrared matrix-assisted laser desorption electrospray ionization (IR-MALDESI) mass spectrometry imaging (MSI) with 100 μm resolution and an MSI method to quantify the melanin biomarker pyrrole-2,3,5-tricarboxylic acid (PTCA) was evaluated. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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