Molecular and Structural Biochemistry

College of Agriculture and Life Sciences

Works Published in 2016

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Displaying works 1 - 20 of 42 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2016 journal article

A High-Resolution Crystal Structure of a Psychrohalophilic α-Carbonic Anhydrase from Photobacterium profundum Reveals a Unique Dimer Interface.

PloS One.

By: V. Somalinga n, G. Buhrman n, A. Arun n, R. Rose n & A. Grunden n

MeSH headings : Carbonic Anhydrases / chemistry; Chlorides / chemistry; Chromatography, Gel; Crystallography, X-Ray; Dimerization; Molecular Dynamics Simulation; Photobacterium / enzymology; Protein Conformation
Source: ORCID
Added: February 23, 2023

2016 report

Designer Probiotic Lactobacilli for use in Farm Animals and Methods for Enrichment and Isolation from any Animal Species or Human

(Invention Disclosure No. 17-063).

By: H. Hassan

Source: NC State University Libraries
Added: March 12, 2022

2016 report

Utilization of Hydroxyl Radicalfor Accelerated Shelf-life Testing

(Invention Disclosure No. 16-275).

By: H. Hassan

Source: NC State University Libraries
Added: March 12, 2022

2016 speech

Use of Probiotics and prebiotics in Poultry

Hassan, H. (2016, October). Presented at the Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.

By: H. Hassan

Event: at Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China

Source: NC State University Libraries
Added: March 12, 2022

2016 report

Engineered Salmonella Serovar Typhimurium Strains, Compositions Thereof, and Methods of Use

(US Provisional Patent No. 62/368,507).

By: H. Hassan & S. Troxell

Source: NC State University Libraries
Added: August 28, 2021

2016 conference paper

The Chicken Gut Microbiome and Salmonella

Presented at the USDA-NIFA –Annual Program Directors Meeting, St. Louis, MO.

By: H. Hassan

Event: USDA-NIFA –Annual Program Directors Meeting at St. Louis, MO on July 30, 2016

Source: NC State University Libraries
Added: August 13, 2021

2016 journal article

Draft Genome Sequences of Lactobacillus animalis Strain P38 and Lactobacillus reuteri Strain P43 Isolated from Chicken Cecum

Genome Announcements, 4(6).

By: M. Rezvani n, M. Mendoza n, M. Koci n, C. Daron n, J. Levy* & H. Hassan n

Sources: Crossref, ORCID
Added: August 13, 2021

2016 chapter

Interplay Between O2 and Iron in Gene Expression: Environmental Sensing by FNR, ArcA, and Fur in Bacteria

In F. J. de Bruijn (Ed.), Stress and Environmental Regulation of Gene Expression and Adaptation in Bacteria, I&II (pp. 1079–1089).

Ed(s): F. de Bruijn

Sources: Crossref, ORCID
Added: August 13, 2021

2016 journal article

Development of the Chick Microbiome: How Early Exposure Influences Future Microbial Diversity

Frontiers in Veterinary Science, 3.

By: A. Ballou n, R. Ali n, M. Mendoza n, J. Ellis, H. Hassan n, W. Croom n, M. Koci n

author keywords: chicken; microbiome development; Salmonella; probiotic; gut development
Sources: Crossref, ORCID
Added: August 13, 2021

2016 journal article

Draft Genome Sequence of Lactobacillus crispatus C25 Isolated from Chicken Cecum

Genome Announcements, 4(6).

By: M. Rezvani n, M. Mendoza n, M. Koci n, C. Daron n, J. Levy* & H. Hassan n

Sources: Crossref, ORCID
Added: June 22, 2021

2016 journal article

Complete Genome Sequence of NC983, a Live Attenuated Strain of Salmonella enterica Serovar Typhimurium

Genome Announcements, 4(5).

By: B. Troxell n, R. Fink*, A. Dickey n, E. Scholl n & H. Hassan n

Sources: Crossref, ORCID
Added: June 22, 2021

2016 journal article

Inside Cover: Oxygen Activation at the Active Site of a Fungal Lytic Polysaccharide Monooxygenase (Angew. Chem. Int. Ed. 3/2017)

Angewandte Chemie International Edition, 56(3), 658–658.

Sources: Crossref, ORCID
Added: September 4, 2020

2016 journal article

Potassium and the K+/H+ Exchanger Kha1p Promote Binding of Copper to ApoFet3p Multi-copper Ferroxidase

Journal of Biological Chemistry, 291(18), 9796–9806.

By: X. Wu*, H. Kim*, J. Seravalli*, J. Barycki*, P. Hart*, D. Gohara*, E. Di Cera*, W. Jung*, D. Kosman*, J. Lee*

MeSH headings : Ceruloplasmin / genetics; Ceruloplasmin / metabolism; Copper / metabolism; Gene Expression Regulation, Fungal / physiology; Iron; Potassium / metabolism; Potassium-Hydrogen Antiporters / biosynthesis; Potassium-Hydrogen Antiporters / genetics; Protein Binding; Saccharomyces cerevisiae / genetics; Saccharomyces cerevisiae / metabolism; Saccharomyces cerevisiae Proteins / biosynthesis; Saccharomyces cerevisiae Proteins / genetics; Saccharomyces cerevisiae Proteins / metabolism; Up-Regulation / physiology
Source: Crossref
Added: August 28, 2020

2016 journal article

Inhibiting Hexamer Disassembly of Human UDP-Glucose Dehydrogenase by Photoactivated Amino Acid Cross-Linking

Biochemistry, 55(22), 3157–3164.

By: G. Grady*, A. Thelen*, J. Albers*, T. Ju*, J. Guo*, J. Barycki*, M. Simpson*

MeSH headings : Amino Acids / chemistry; Amino Acids / radiation effects; Catalysis; Cross-Linking Reagents; Humans; Kinetics; Light; Models, Molecular; Oxidation-Reduction; Photochemical Processes; Protein Conformation; Protein Multimerization / radiation effects; Uridine Diphosphate Glucose / metabolism; Uridine Diphosphate Glucose Dehydrogenase / chemistry; Uridine Diphosphate Glucose Dehydrogenase / metabolism
Source: Crossref
Added: February 24, 2020

2016 journal article

Loss of exogenous androgen dependence by prostate tumor cells is associated with elevated glucuronidation potential

Hormones and Cancer, 7(4), 260–271.

By: B. Zimmer*, M. Howell*, Q. Wei*, L. Ma*, T. Romsdahl*, E. Loughman*, J. Markham*, J. Seravalli*, J. Barycki*, M. Simpson*

author keywords: Prostate cancer; Castration resistance; Dihydrotestosterone; Detoxification; LNCaP
MeSH headings : Androgens / pharmacology; Cell Line, Tumor; Gene Expression Regulation, Neoplastic / drug effects; Glucuronides / metabolism; Glucuronosyltransferase / metabolism; Humans; Kallikreins / genetics; Kallikreins / metabolism; Male; Minor Histocompatibility Antigens / metabolism; Models, Biological; Promoter Regions, Genetic; Prostate-Specific Antigen / genetics; Prostate-Specific Antigen / metabolism; Prostatic Neoplasms / genetics; Prostatic Neoplasms / metabolism; Prostatic Neoplasms, Castration-Resistant / genetics; Prostatic Neoplasms, Castration-Resistant / metabolism; Receptors, Androgen / metabolism; Uridine Diphosphate Glucose Dehydrogenase / metabolism
Source: Crossref
Added: February 24, 2020

2016 journal article

Phage display and structural studies reveal plasticity in substrate specificity of caspase-3a from zebrafish

Protein Science, 25(11), 2076–2088.

By: M. Tucker n, S. MacKenzie n, J. Maciag n, H. Dirscherl Ackerman, P. Swartz n, J. Yoder n, P. Hamilton n, A. Clay Clark*

author keywords: phage display substrate library; substrate recognition; Danio rerio; apoptosis
MeSH headings : Allosteric Regulation; Animals; Caspase 3 / chemistry; Crystallography, X-Ray; Molecular Dynamics Simulation; Peptide Library; Substrate Specificity; Zebrafish
Source: Crossref
Added: February 24, 2020

2016 chapter

Isolation of Plant Nuclei at Defined Cell Cycle Stages Using EdU Labeling and Flow Cytometry

In Methods in Molecular Biology (pp. 69–86).

By: E. Wear n, L. Concia n, A. Brooks n, E. Markham n, T. Lee n, G. Allen n, W. Thompson n, L. Hanley-Bowdoin n

author keywords: 5-Ethynyl-2 '-deoxyuridine; Flow cytometry; Nuclei sorting; Arabidopsis; Maize; Percoll gradient; Cell cycle; DNA replication; Chromatin
MeSH headings : Arabidopsis / cytology; Arabidopsis / genetics; Cell Cycle; Cell Fractionation / methods; Cell Nucleus / genetics; Click Chemistry / methods; DNA Replication; DNA, Plant / analysis; DNA, Plant / genetics; Deoxyuridine / analogs & derivatives; Deoxyuridine / analysis; Flow Cytometry / methods; Fluorescent Dyes / analysis; Zea mays / cytology; Zea mays / genetics
Sources: Crossref, ORCID
Added: January 13, 2020

2016 article

Improving Gene Regulatory Network Inference by Incorporating Rates of Transcriptional Changes

Desai, J. S., Sartor, R. C., Lawas, L. M., Jagadish, S. V. K., & Doherty, C. J. (2016, December 24). (Vol. 12). Vol. 12.

By: J. Desai n, R. Sartor*, L. Lawas*, S. Jagadish* & C. Doherty n

Source: ORCID
Added: June 25, 2019

2016 journal article

The role of the vacuolar ATPase in alphavirus replication.

Molecular Biology of the Cell, 27.

Source: NC State University Libraries
Added: August 6, 2018

2016 journal article

Detection of Mycoplasma haemocanis, Mycoplasma haematoparvum, Mycoplasma suis and other vector-borne pathogens in dogs from Cordoba and Santa Fe, Argentina

PARASITES & VECTORS, 9.

By: P. Mascarelli n, G. Tartara*, N. Pereyra* & R. Maggi n

author keywords: Dogs; Babesia vogeli; Anaplasma phagocytophilum; Anaplasma platys; Ehrlichia canis; Mycoplasma haemocanis; Mycoplasma haematoparvum; Mycoplasma suis; Bartonella spp.; Argentina
MeSH headings : Animals; Argentina / epidemiology; Dog Diseases / epidemiology; Dog Diseases / microbiology; Dogs; Female; Male; Mycoplasma / classification; Mycoplasma / genetics; Mycoplasma / isolation & purification; Mycoplasma / physiology; Mycoplasma Infections / epidemiology; Mycoplasma Infections / microbiology; Mycoplasma Infections / veterinary; Tick-Borne Diseases / epidemiology; Tick-Borne Diseases / microbiology; Tick-Borne Diseases / veterinary
Sources: Web Of Science, ORCID
Added: August 6, 2018