Molecular & Structural Biochemistry
College of Agriculture and Life Sciences
Works Published in 2013
Displaying works 1 - 20 of 48 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2013 report
Attenuated FNR deficient enterobacteria
(Patent No. US8435506B2).
Source: NC State University Libraries
Added: March 12, 2022
2013 journal article
UDP-glucose Dehydrogenase Activity and Optimal Downstream Cellular Function Require Dynamic Reorganization at the Dimer-Dimer Subunit Interfaces
Journal of Biological Chemistry, 288(49), 35049–35057.
author keywords: Dehydrogenase; Enzyme Catalysis; Glycobiology; Hyaluronate; Prostate Cancer; Protein Conformation; Protein Dynamics; Cardiac Defects; Human UGDH; Hyaluronan
MeSH headings : Amino Acid Substitution; Enzyme Stability; HEK293 Cells; Humans; Kinetics; Models, Molecular; Mutagenesis, Site-Directed; Protein Interaction Domains and Motifs; Protein Multimerization; Protein Structure, Quaternary; Protein Subunits; Proteolysis; Thermodynamics; Uridine Diphosphate Glucose Dehydrogenase / chemistry; Uridine Diphosphate Glucose Dehydrogenase / genetics; Uridine Diphosphate Glucose Dehydrogenase / metabolism
www.jbc.org (publisher PDF)
Source: Crossref
Added: August 28, 2020
2013 journal article
Third School on the Applications of Neutron Scattering Techniques in Structural Biology, Oak Ridge, TN
Neutron News, 24(1), 4–4.
Source: ORCID
Added: January 6, 2020
2013 journal article
Refinement of macromolecular structures against neutron data withSHELXL2013
Journal of Applied Crystallography, 47(1), 462–466.
Source: ORCID
Added: January 6, 2020
2013 article
Neutron Scattering Techniques and Applications in Structural Biology
Ankner, J. F., Heller, W. T., Herwig, K. W., Meilleur, F., & Myles, D. A. A. (2013, April). Current Protocols in Protein Science.
MeSH headings : Cell Membrane / chemistry; Deuterium; Models, Molecular; Molecular Biology / methods; Neutron Diffraction / methods; Neutrons; Proteins / chemistry
Source: ORCID
Added: January 6, 2020
2013 journal article
The IMAGINE instrument: first neutron protein structure and new capabilities for neutron macromolecular crystallography.
Biological Crystallography, 69(Pt 10), 2157–2160,
MeSH headings : Archaeal Proteins / chemistry; Crystallography, X-Ray / instrumentation; Crystallography, X-Ray / methods; Hydrogen Bonding; Macromolecular Substances / chemistry; Neutrons; Pyrococcus furiosus / chemistry; Rubredoxins / chemistry; Scattering, Radiation; X-Ray Diffraction
Source: ORCID
Added: January 6, 2020
2013 book
Experimental biochemistry: Theory, experiment, analysis and reporting
Dubuque, Iowa: Kendall Hunt.
Source: NC State University Libraries
Added: August 6, 2018
2013 journal article
Origin of Overstretching Transitions in Single-Stranded Nucleic Acids
PHYSICAL REVIEW LETTERS, 111(18).
MeSH headings : DNA, Single-Stranded / chemistry; Elasticity; Hydrogen Bonding; Microscopy, Atomic Force / methods; Models, Molecular; Nuclear Magnetic Resonance, Biomolecular / methods; Nucleic Acid Conformation; RNA / chemistry; Spectrum Analysis / methods
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Ferritin: The Protein Nanocage and Iron Biomineral in Health and in Disease
INORGANIC CHEMISTRY, 52(21), 12223–12233.
MeSH headings : Anemia / drug therapy; Animals; Catalytic Domain; Drug Delivery Systems / methods; Ferritins / chemistry; Ferritins / genetics; Ferritins / metabolism; Hemosiderin / metabolism; Humans; Iron Overload / drug therapy; Molecular Targeted Therapy / methods; Nanostructures / administration & dosage; RNA, Messenger; Transfusion Reaction
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Understanding the Role of Proteolytic Digestion on Discovery and Targeted Proteomic Measurements Using Liquid Chromatography Tandem Mass Spectrometry and Design of Experiments
JOURNAL OF PROTEOME RESEARCH, 12(12), 5820–5829.
author keywords: design of experiments; proteolytic digestion; LC-MS/MS; Populus trichocarpa
MeSH headings : Amino Acid Sequence; Animals; Cattle; Chromatography, Liquid / standards; Factor Analysis, Statistical; Hydrogen-Ion Concentration; Isotope Labeling; Molecular Sequence Annotation; Molecular Sequence Data; Peptide Fragments / chemistry; Peptide Fragments / isolation & purification; Plant Proteins / chemistry; Plant Proteins / isolation & purification; Populus / chemistry; Protein Stability; Proteolysis; Proteomics / methods; Proteomics / standards; Research Design; Swine; Tandem Mass Spectrometry / standards; Trypsin / chemistry; Xylem / chemistry
Source: Web Of Science
Added: August 6, 2018
2013 review
Transcriptional regulation by Ferric Uptake Regulator (Fur) in pathogenic bacteria
[Review of ]. FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 3.
author keywords: Ferric Uptake Regulator; iron; oxidative stress; gene regulation; pathogenic bacteria
MeSH headings : Animals; Bacteria / genetics; Bacteria / isolation & purification; Bacteria / metabolism; Bacterial Infections / microbiology; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Ferric Compounds / metabolism; Gene Expression Regulation, Bacterial; Host-Pathogen Interactions; Humans; Oxidative Stress; Reactive Oxygen Species / metabolism; Reactive Oxygen Species / toxicity; Repressor Proteins / genetics; Repressor Proteins / metabolism; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
The Amborella Genome and the Evolution of Flowering Plants
SCIENCE, 342(6165), 1467-+.
MeSH headings : Conservation of Natural Resources; Contig Mapping; Evolution, Molecular; Flowers / genetics; Gene Duplication; Genetic Variation; Genome, Plant; Metagenomics / statistics & numerical data; Molecular Sequence Annotation; Multigene Family; New Caledonia; Phylogeny; Sequence Analysis, DNA; Tracheophyta / classification; Tracheophyta / genetics; Tracheophyta / growth & development
Source: Web Of Science
Added: August 6, 2018
2013 journal article
SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa
PLANT CELL, 25(11), 4324–4341.
MeSH headings : Algorithms; Cell Wall / genetics; Chromatin Immunoprecipitation; Gene Expression Regulation, Plant; Gene Ontology; Gene Regulatory Networks; High-Throughput Nucleotide Sequencing; Models, Genetic; Plant Proteins / genetics; Plant Proteins / metabolism; Plants, Genetically Modified; Polymerase Chain Reaction / methods; Populus / genetics; Populus / metabolism; Protoplasts; Reproducibility of Results; Transcription Factors / genetics; Transcription Factors / metabolism; Transfection; Wood / genetics; Wood / metabolism; Xylem / cytology; Xylem / genetics
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Polymeric Systems Incorporating Plant Viral Nanoparticles for Tailored Release of Therapeutics
ADVANCED HEALTHCARE MATERIALS, 2(7), 1001–1007.
author keywords: controlled release; drug delivery; nanofibers; plant viral nanoparticles; virus
MeSH headings : Antineoplastic Agents / administration & dosage; Doxorubicin / administration & dosage; Drug Carriers; Kinetics; Nanoparticles; Plant Viruses; Polymers
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Lengthening the Intersubunit Linker of Procaspase 3 Leads to Constitutive Activation
BIOCHEMISTRY, 52(36), 6219–6231.
MeSH headings : Apoptosis / physiology; Caspase 3 / chemistry; Caspase 3 / genetics; Caspase 3 / metabolism; Caspase Inhibitors / pharmacology; Catalytic Domain; Enzyme Activation; Enzyme Precursors / chemistry; Models, Chemical; Models, Molecular; Molecular Dynamics Simulation; Protein Conformation; Protein Multimerization
Source: Web Of Science
Added: August 6, 2018
2013 journal article
On the structure of water and chloride ion interactions with a peptide backbone in solution
Physical Chemistry Chemical Physics, 15(48), 21023–21033.
Source: NC State University Libraries
Added: August 6, 2018
2013 journal article
Transcriptional regulation of the human ferritin gene by coordinated regulation of Nrf2 and protein arginine methyltransferases PRMT1 and PRMT4
FASEB JOURNAL, 27(9), 3763–3774.
author keywords: arsenic; histone methylation; antioxidant; oxidative stress
MeSH headings : Antioxidants / metabolism; Arsenic / toxicity; Cell Line; Cells, Cultured; Ferritins / genetics; Fibroblasts / cytology; Fibroblasts / metabolism; Histones / metabolism; Humans; Keratinocytes / cytology; Keratinocytes / metabolism; Methylation; NF-E2-Related Factor 2 / genetics; NF-E2-Related Factor 2 / metabolism; Oxidative Stress / drug effects; Oxidative Stress / genetics; Protein-Arginine N-Methyltransferases / genetics; Protein-Arginine N-Methyltransferases / metabolism; Repressor Proteins / genetics; Repressor Proteins / metabolism; Transcription, Genetic / drug effects; Transcription, Genetic / genetics
Source: Web Of Science
Added: August 6, 2018
2013 journal article
The role of T56 in controlling the flexibility of the distal histidine in dehaloperoxidase-hemoglobin from Amphitrite ornata
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 1834(10), 2020–2029.
author keywords: Enzyme kinetics; Catalytic efficiency; Hemichrome; Resonance Raman; Molecular dynamics
MeSH headings : Animals; Biocatalysis; Heme / chemistry; Hemoglobins / chemistry; Hemoglobins / genetics; Histidine / chemistry; Histidine / genetics; Iron / chemistry; Kinetics; Molecular Dynamics Simulation; Mutagenesis, Site-Directed; Peroxidases / chemistry; Peroxidases / genetics; Polychaeta / chemistry; Polychaeta / enzymology; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Spectroscopy, Fourier Transform Infrared; Spectrum Analysis, Raman; Thermodynamics; Threonine / chemistry; Threonine / genetics
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Slow folding and assembly of a procaspase-3 interface variant
Biochemistry, 52(20), 3415–3427.
Source: NC State University Libraries
Added: August 6, 2018
2013 journal article
Peptide Aptamers That Bind to Geminivirus Replication Proteins Confer a Resistance Phenotype to Tomato Yellow Leaf Curl Virus and Tomato Mottle Virus Infection in Tomato
JOURNAL OF VIROLOGY, 87(17), 9691–9706.
MeSH headings : Amino Acid Sequence; Aptamers, Peptide / genetics; Aptamers, Peptide / metabolism; Begomovirus / genetics; Begomovirus / pathogenicity; Begomovirus / physiology; DNA, Viral / genetics; DNA, Viral / metabolism; Geminiviridae / genetics; Geminiviridae / pathogenicity; Geminiviridae / physiology; Solanum lycopersicum / virology; Molecular Sequence Data; Phenotype; Plant Diseases / genetics; Plant Diseases / prevention & control; Plant Diseases / virology; Plants, Genetically Modified; Protein Binding; Two-Hybrid System Techniques; Viral Proteins / genetics; Viral Proteins / physiology; Virus Replication
Sources: Web Of Science, ORCID
Added: August 6, 2018
