Works Published in 2016

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Displaying works 1 - 20 of 47 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2016 report

Hormone-Mediated Gene-Specific Translation Regulation

http://hdl.handle.net/10630/11885

By: C. Merchante, J. Brumós, J. Yun, A. Stepanova & J. Alonso

Source: NC State University Libraries
Added: October 14, 2021

2016 journal article

A Ribosome Footprinting Protocol for Plants

BIO-PROTOCOL, 6(21).

By: C. Merchante, Q. Hu, S. Heber, J. Alonso & A. Stepanova

Sources: Crossref, ORCID
Added: October 10, 2021

2016 journal article

Genetic architecture of natural variation in visual senescence in Drosophila

Proceedings of the National Academy of Sciences, 113(43), E6620–E6629.

By: M. Carbone n, A. Yamamoto n, W. Huang n, R. Lyman n, T. Meadors n, R. Yamamoto n, R. Anholt n, T. Mackay n

co-author countries: United States of America 🇺🇸
author keywords: aging; behavioral genetics; DGRP GWA analysis; phototaxis; xQTL mapping
MeSH headings : Aging / genetics; Animals; Biological Variation, Individual; Drosophila Proteins / genetics; Drosophila Proteins / metabolism; Drosophila melanogaster / genetics; Drosophila melanogaster / growth & development; Drosophila melanogaster / metabolism; Eye Proteins / genetics; Eye Proteins / metabolism; Gene Expression Regulation, Developmental; Gene Regulatory Networks; Genetic Variation; Genome; Genome-Wide Association Study; Humans; Phototaxis; Quantitative Trait Loci; Vision, Ocular / genetics
Source: Crossref
Added: February 24, 2020

2016 chapter

Isolation of Plant Nuclei at Defined Cell Cycle Stages Using EdU Labeling and Flow Cytometry

In Methods in Molecular Biology (pp. 69–86).

By: E. Wear n, L. Concia n, A. Brooks n, E. Markham n, T. Lee n, G. Allen n, W. Thompson n, L. Hanley-Bowdoin n

co-author countries: Switzerland 🇨🇭 United States of America 🇺🇸
author keywords: 5-Ethynyl-2 '-deoxyuridine; Flow cytometry; Nuclei sorting; Arabidopsis; Maize; Percoll gradient; Cell cycle; DNA replication; Chromatin
MeSH headings : Arabidopsis / cytology; Arabidopsis / genetics; Cell Cycle; Cell Fractionation / methods; Cell Nucleus / genetics; Click Chemistry / methods; DNA Replication; DNA, Plant / analysis; DNA, Plant / genetics; Deoxyuridine / analogs & derivatives; Deoxyuridine / analysis; Flow Cytometry / methods; Fluorescent Dyes / analysis; Zea mays / cytology; Zea mays / genetics
Sources: Crossref, ORCID
Added: February 14, 2019

2016 journal article

SEUSS integrates gibberellin signaling with transcriptional inputs from the SHR-SCR-SCL3 module to regulate middle cortex formation in the Arabidopsis root.

Plant Physiology. http://europepmc.org/abstract/med/26818732

By: X. Gong, M. Flores-Vergara, J. Hong, H. Chu, J. Lim, R. Franks, Z. Liu, J. Xu

Source: ORCID
Added: January 22, 2019

2016 journal article

Analysis of two TFL1 homologs of dogwood species (Cornus L.) indicates functional conservation in control of transition to flowering.

http://europepmc.org/abstract/med/26825444

By: X. Liu, J. Zhang, A. Abuahmad, R. Franks, D. Xie, Q. Xiang, Planta

Source: ORCID
Added: January 22, 2019

2016 article

Histological Analysis of the Arabidopsis Gynoecium and Ovules Using Chloral Hydrate Clearing and Differential Interference Contrast Light Microscopy

OOGENESIS: METHODS AND PROTOCOLS, Vol. 1457, pp. 1–7.

By: R. Franks n

co-author countries: United States of America 🇺🇸

Contributors: R. Franks n

author keywords: Ovule; Chloral hydrate; Nomarski optics; Ovary; Seed development; Seedpod
MeSH headings : Arabidopsis / cytology; Arabidopsis / physiology; Chloral Hydrate; Cytological Techniques; Microscopy, Interference; Ovule / cytology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

The Effects of fluopyram on nematodes

Journal of Nematology, 48(4), 330–331.

By: J. Heiken, M. Schwarz, E. Davis & C. Opperman

Source: NC State University Libraries
Added: August 6, 2018

2016 journal article

Population dynamics of Belonolaimus longicaudatus in Central North Carolina

Journal of Nematology, 48(4), 322–323.

Source: NC State University Libraries
Added: August 6, 2018

2016 journal article

Effect of Plant Species, Fertilizer Acidity/Basicity, and Fertilizer Concentration on pH of Soilless Root Substrate

HORTSCIENCE, 51(12), 1596–1601.

By: K. Jeong, P. Nelson, C. Niedziela & D. Dickey

author keywords: alkalinity; electrical conductivity; root media
Source: Web Of Science
Added: August 6, 2018

2016 journal article

Development of a Transportation System Simulation Manual Framework From Theory to Practice

TRANSPORTATION RESEARCH RECORD, (2561), 45–52.

co-author countries: United States of America 🇺🇸
Source: Web Of Science
Added: August 6, 2018

2016 article

Cutting Out the Middle Man in Light-Hormone Interactions

Stepanova, A. N., & Alonso, J. M. (2016, December 5). DEVELOPMENTAL CELL, Vol. 39, pp. 524–526.

co-author countries: United States of America 🇺🇸

Contributors: A. Stepanova n & J. Alonso n

MeSH headings : Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Ethylenes / metabolism; Gene Expression Regulation, Plant; Nuclear Proteins / genetics; Transcription Factors / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Genetic Drift, Not Life History or RNAi, Determine Long-Term Evolution of Transposable Elements

GENOME BIOLOGY AND EVOLUTION, 8(9), 2964–2978.

co-author countries: Spain 🇪🇸 United Kingdom of Great Britain and Northern Ireland 🇬🇧 Israel 🇮🇱 United States of America 🇺🇸
author keywords: nematoda; transposable elements evolution; RNA interference; mating system; parasitism
Source: Web Of Science
Added: August 6, 2018

2016 journal article

A flow cytometric method for estimating S-phase duration in plants

JOURNAL OF EXPERIMENTAL BOTANY, 67(21), 6077–6087.

By: L. Mickelson-Young n, E. Wear n, P. Mulvaney n, T. Lee n, E. Szymanski n, G. Allen n, L. Hanley-Bowdoin n, W. Thompson n

co-author countries: United States of America 🇺🇸
author keywords: Arabidopsis; barley; EdU; flow cytometry; maize; replication timing; rice; S-phase duration; wheat
MeSH headings : Arabidopsis / cytology; Arabidopsis / growth & development; DNA, Plant / metabolism; Deoxyuridine / analogs & derivatives; Deoxyuridine / metabolism; Flow Cytometry / methods; G1 Phase / physiology; G2 Phase / physiology; Hordeum / cytology; Hordeum / growth & development; Meristem / cytology; Meristem / growth & development; Oryza / cytology; Oryza / growth & development; S Phase / physiology; Triticum / cytology; Triticum / growth & development; Zea mays / cytology; Zea mays / growth & development
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Multivalent Chromosomal Expression of the Clostridium botulinum Serotype A Neurotoxin Heavy-Chain Antigen and the Bacillus anthracis Protective Antigen in Lactobacillus acidophilus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 82(20), 6091–6101.

co-author countries: United States of America 🇺🇸
MeSH headings : Anthrax / microbiology; Anthrax / prevention & control; Bacillus anthracis / genetics; Bacillus anthracis / metabolism; Bacterial Vaccines / genetics; Bacterial Vaccines / metabolism; Botulinum Toxins, Type A / genetics; Botulinum Toxins, Type A / metabolism; Botulism / microbiology; Botulism / prevention & control; Chromosomes, Bacterial / genetics; Chromosomes, Bacterial / metabolism; Clostridium botulinum / genetics; Clostridium botulinum / metabolism; Gene Expression; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / metabolism
Source: Web Of Science
Added: August 6, 2018

2016 article

Auxin catabolism unplugged: Role of IAA oxidation in auxin homeostasis

Stepanova, A. N., & Alonso, J. M. (2016, September 27). PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol. 113, pp. 10742–10744.

co-author countries: United States of America 🇺🇸

Contributors: A. Stepanova n & J. Alonso n

MeSH headings : Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Genes, Plant; Homeostasis; Indoleacetic Acids / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Quantitative trait loci influencing forking defects in an outbred pedigree of loblolly pine

BMC GENETICS, 17.

By: J. Xiong n, S. McKeand n, F. Isik n, J. Wegrzyn*, D. Neale*, Z. Zeng n, L. Silva*, R. Whetten n

co-author countries: Brazil 🇧🇷 United States of America 🇺🇸
author keywords: QTL; Stem forking; Outbred; Pinus taeda; MAS; Tree breeding; Wood quality
MeSH headings : Algorithms; Breeding; Chromosome Mapping; Genetic Association Studies; Genetic Linkage; Genetic Markers; Genotype; Models, Statistical; Pedigree; Phenotype; Pinus taeda / genetics; Polymorphism, Single Nucleotide; Quantitative Trait Loci; Quantitative Trait, Heritable
Source: Web Of Science
Added: August 6, 2018

2016 journal article

Genomic evolution of lactic acid bacteria: From single gene function to the pan-genome

Biotechnology of Lactic Acid Bacteria: Novel Applications, 2nd Edition, 32–54.

By: G. Douglas*, M. Azcarate-Peril* & T. Klaenhammer n

co-author countries: United States of America 🇺🇸
Source: NC State University Libraries
Added: August 6, 2018

2016 journal article

Expansion of GA Dinucleotide Repeats Increases the Density of CLAMP Binding Sites on the X-Chromosome to Promote Drosophila Dosage Compensation

PLOS GENETICS, 12(7).

By: G. Kuzu*, E. Kaye*, J. Chery*, T. Siggers*, L. Yang*, J. Dobson*, S. Boor*, J. Bliss* ...

co-author countries: China 🇨🇳 United States of America 🇺🇸
MeSH headings : Amino Acid Motifs; Animals; Binding Sites; Biological Evolution; DNA / chemistry; DNA-Binding Proteins / genetics; Dinucleotide Repeats; Dosage Compensation, Genetic; Drosophila Proteins / genetics; Drosophila melanogaster / genetics; Female; Gene Dosage; Genes, X-Linked; Genetic Linkage; Genome, Insect; Male; Oligonucleotide Array Sequence Analysis; Sequence Analysis, DNA; X Chromosome / genetics
Source: Web Of Science
Added: August 6, 2018

2016 journal article

AcmB Is an S-Layer-Associated beta-N-Acetylglucosaminidase and Functional Autolysin in Lactobacillus acidophilus NCFM

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 82(18), 5687–5697.

co-author countries: United States of America 🇺🇸
MeSH headings : Acetylglucosaminidase / genetics; Acetylglucosaminidase / metabolism; Bacterial Adhesion; Bacteriolysis; Cell Division; Cell Wall / chemistry; Computational Biology; Gene Deletion; Genetic Complementation Test; Lactobacillus acidophilus / enzymology; Lactobacillus acidophilus / genetics; Membrane Glycoproteins / genetics; Membrane Glycoproteins / metabolism; N-Acetylmuramoyl-L-alanine Amidase / genetics; N-Acetylmuramoyl-L-alanine Amidase / metabolism; Peptidoglycan / analysis
Source: Web Of Science
Added: August 6, 2018