Works Published in 2006
Displaying works 1 - 20 of 78 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2006 journal article
Insulated piggyBac vectors for insect transgenesis
BMC Biotechnology, 6(1), 27.
bmcbiotechnol.biomedcentral.com (publisher PDF)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Sources: Crossref, ORCID
Added: January 29, 2024
2006 journal article
A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
Nature Genetics, 38(2), 203–208.
MeSH headings : Gene Expression; Genetic Techniques; Genetic Variation; Heredity / genetics; Humans; Models, Genetic; Phenotype; Quantitative Trait, Heritable; Research Design; Zea mays / genetics
TL;DR:
A unified mixed-model approach to account for multiple levels of relatedness simultaneously as detected by random genetic markers is developed and provides a powerful complement to currently available methods for association mapping.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science)
Sources: Crossref, ORCID
Added: January 25, 2021
2006 journal article
Imaginal Discs, the Genetic and Cellular Logic of Pattern Formation. Lewis I Held, Jr. Cambridge University Press. 2005. 461 pages. ISBN 0 521 01835 8. Price £38. (paperback). (ISBN 0521 58445 0. Price £120. (hardback) published 2002)
Genetical Research, 87(3), 219–219.
Source: Crossref
Added: November 22, 2020
2006 journal article
PCR-based screening for insertional mutants.
Methods in Molecular Biology (Clifton, N.J.), 323, 163–172. http://www.scopus.com/inward/record.url?eid=2-s2.0-33745265233&partnerID=MN8TOARS
Contributors: A. Stepanova & J. Alonso
Source: ORCID
Added: December 19, 2019
2006 journal article
The Arabidopsis histidine phosphotransfer proteins are redundant positive regulators of cytokinin signaling
The Plant Cell Online, 18(11), 3073–3087.
Contributors: C. Hutchison*, J. Li *, C. Argueso *, M. Gonzalez*, E. Lee*, M. Lewis*, B. Maxwell *, T. Perdue*, G. Schaller *, J. Alonso *
MeSH headings : Arabidopsis / drug effects; Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Chlorophyll / metabolism; Cytokinins / metabolism; Cytokinins / pharmacology; DNA, Bacterial / metabolism; Histidine / metabolism; Hypocotyl / cytology; Hypocotyl / drug effects; Molecular Sequence Data; Mutagenesis, Insertional; Mutation / genetics; Phenotype; Phosphotransferases / metabolism; Phylogeny; Plant Roots / cytology; Plant Roots / drug effects; Plant Shoots / cytology; Plant Shoots / drug effects; Seedlings / cytology; Seedlings / drug effects; Seeds / cytology; Seeds / drug effects; Signal Transduction / drug effects
TL;DR:
Most of the AHPs are redundant, positive regulators of cytokinin signaling and affect multiple aspects of plant development, including reduced fertility, increased seed size, reduced vascular development, and a shortened primary root.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2006 journal article
RACK1 mediates multiple hormone responsiveness and developmental processes in Arabidopsis
Journal of Experimental Botany, 57(11), 2697–2708.
Contributors: J. Chen *, H. Ullah *, B. Temple *, J. Liang *, J. Guo *, J. Alonso *, J. Ecker *, A. Jones *
author keywords: Abscisic acid; auxin; brassinosteroid; flowering; gibberellin; RACK1; seed germination; signal transduction
MeSH headings : Amino Acid Sequence; Arabidopsis / drug effects; Arabidopsis / growth & development; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / physiology; GTP-Binding Proteins / genetics; Gibberellins / pharmacology; Glucuronidase / analysis; Models, Molecular; Molecular Sequence Data; Mutation; Plant Growth Regulators / pharmacology; Plant Leaves / anatomy & histology; Plant Leaves / growth & development; Plant Leaves / metabolism; Plants, Genetically Modified / drug effects; Plants, Genetically Modified / growth & development; Plants, Genetically Modified / metabolism; Protein Subunits / genetics; Receptors for Activated C Kinase; Receptors, Cell Surface / chemistry; Receptors, Cell Surface / genetics; Receptors, Cell Surface / physiology; Recombinant Fusion Proteins / analysis; Sequence Alignment
TL;DR:
Results provide the first genetic evidence that RACK1A is involved in multiple signal transduction pathways and mediates hormone responses and plays a regulatory role in multiple developmental processes.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Source: ORCID
Added: December 19, 2019
2006 journal article
PHYTOCHROME KINASE SUBSTRATE 1 is a phototropin 1 binding protein required for phototropism
Proceedings of the National Academy of Sciences, 103(26), 10134–10139.
Contributors: P. Lariguet*, I. Schepens *, D. Hodgson*, U. Pedmale *, M. Trevisan *, C. Kami*, M. Carbonnel*, J. Alonso *, J. Ecker *, E. Liscum *
author keywords: Arabidopsis thaliana; NONPHOTOTROPIC HYPOCCTYL 3; photomorphogenesis photoreceptors
MeSH headings : Arabidopsis / genetics; Arabidopsis / physiology; Arabidopsis Proteins / analysis; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Membrane / chemistry; Cell Membrane / metabolism; Intracellular Signaling Peptides and Proteins / analysis; Intracellular Signaling Peptides and Proteins / genetics; Intracellular Signaling Peptides and Proteins / metabolism; Membrane Proteins / analysis; Membrane Proteins / genetics; Membrane Proteins / metabolism; Phosphoproteins / analysis; Phosphoproteins / genetics; Phosphoproteins / metabolism; Phototropism / genetics; Phytochrome A / metabolism; Protein Serine-Threonine Kinases / genetics; Protein Serine-Threonine Kinases / metabolism
TL;DR:
It is shown that PKS1 induction by a pulse of blue light is phytochrome A-dependent, suggesting that the PKS proteins may provide a molecular link between these two photoreceptor families.
(via Semantic Scholar)
Source: ORCID
Added: December 19, 2019
2006 chapter
PCR-based screening for insertional mutants
In Arabidopsis Protocols (pp. 163–172).
Contributors: A. Stepanova & J. Alonso
Source: ORCID
Added: December 19, 2019
2006 journal article
Molecular mechanisms of ethylene signaling in Arabidopsis
Molecular BioSystems, 2(3-4), 165.
Contributors: L. Benavente n & J. Alonso n
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Ethylenes / metabolism; Ethylenes / pharmacology; Gene Expression Regulation, Plant; Plant Proteins / chemistry; Plant Proteins / genetics; Plant Proteins / metabolism; Receptors, Cell Surface / chemistry; Receptors, Cell Surface / genetics; Receptors, Cell Surface / metabolism; Signal Transduction / drug effects; raf Kinases / metabolism
TL;DR:
The ethylene signaling pathway starts with the perception of this gaseous hormone by a family of membrane-anchored receptors followed by a Raf-like kinase CTR1 that is physically associated with the receptors and actively inhibits downstream components of the pathway.
(via Semantic Scholar)
Sources: Crossref, ORCID
Added: December 19, 2019
2006 journal article
CDPKs CPK6 and CPK3 function in ABA regulation of guard cell S-type anion-and Ca2+-permeable channels and stomatal closure
PLoS Biology, 4(10), e327.
Contributors: I. Mori, Y. Murata, Y. Yang, S. Munemasa, Y. Wang, S. Andreoli, H. Tiriac, J. Alonso, J. Harper, J. Ecker
Source: ORCID
Added: December 19, 2019
2006 journal article
In situ methods to localize transgenes and transcripts in interphase nuclei: a tool for transgenic plant research
Plant Methods, 2, 18.
TL;DR:
In situ methods to visualize transgenes and their transcripts during interphase from different tissues and plant species are developed, which reduce the time necessary for characterization of transgene integration by eliminating the need for time-consuming segregation analysis, and extend characterization to the interphase nucleus, thus increasing the likelihood of accurate prediction of transGene activity.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: April 21, 2019
2006 journal article
Evolutionary Genomics (Evolutionary and Ecological Functional Genomics) -- the power of Arabidopsis thaliana to study adaptive evolution
Japanese Journal of Ecology, 56(1), 28.
Source: NC State University Libraries
Added: August 6, 2018
2006 patent
High efficiency gene targeting in plants
Washington, DC: U.S. Patent and Trademark Office.
Source: NC State University Libraries
Added: August 6, 2018
2006 journal article
A modified protocol for rapid DNA isolation from plant tissues using cetyltrimethylammonium bromide
NATURE PROTOCOLS, 1(5), 2320–2325.
MeSH headings : Cetrimonium; Cetrimonium Compounds; DNA, Plant / isolation & purification; Magnoliopsida / chemistry; Plant Leaves / chemistry; Time Factors
TL;DR:
The modified CTAB procedure is faster, omits the selective precipitation and CsCl gradient steps, uses less expensive and toxic reagents, requires only inexpensive laboratory equipment and is more readily adapted to high-throughput DNA extraction.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2006 journal article
Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1-and mammalian AMPK-activating kinases
PLANT PHYSIOLOGY, 142(4), 1642–1655.
MeSH headings : AMP-Activated Protein Kinase Kinases; Amino Acid Sequence; Animals; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis / virology; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Flowers / genetics; Flowers / metabolism; Flowers / virology; Fungal Proteins / chemistry; Geminiviridae / physiology; Gene Expression Regulation, Plant; Genetic Complementation Test; Molecular Sequence Data; Phylogeny; Plant Diseases / virology; Plant Leaves / genetics; Plant Leaves / metabolism; Plant Leaves / virology; Plant Shoots / genetics; Plant Shoots / metabolism; Plant Shoots / virology; Protein Kinases / chemistry; Protein Serine-Threonine Kinases / chemistry; Protein Serine-Threonine Kinases / genetics; Protein Serine-Threonine Kinases / metabolism; RNA, Messenger / metabolism; Sequence Alignment; Two-Hybrid System Techniques; Up-Regulation; Viral Proteins / metabolism
TL;DR:
Both full-length GRIK1 and GRIk2 interact with AL1 in yeast two-hybrid studies, suggesting that the Arabidopsis kinases mediate one or more processes during early plant development and geminivirus infection by activating SNF1-related kinases.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2006 journal article
Characterization of a line of pigs previously selected for increased litter size for RBP4 and follistatin
JOURNAL OF ANIMAL BREEDING AND GENETICS, 123(6), 389–395.
author keywords: follistatin; litter size; pigs; retinol-binding protein 4
MeSH headings : Animals; Female; Follistatin / genetics; Litter Size / genetics; Male; Polymerase Chain Reaction; Pregnancy; Receptors, Estrogen / genetics; Retinol-Binding Proteins / genetics; Sus scrofa / genetics; Sus scrofa / physiology
TL;DR:
Responses to selection for increased litter size in pigs could not be attributed to effects at the ESR, RBP4 or FS loci.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Genomic variation in rice: Genesis of highly polymorphic linkage blocks during domestication
PLOS GENETICS, 2(11), 1824–1833.
MeSH headings : Agriculture; Base Sequence; Crops, Agricultural / genetics; Genes, Plant / genetics; Genome, Plant / genetics; Haplotypes; Linkage Disequilibrium / genetics; Molecular Sequence Data; Oryza / genetics; Phylogeny; Polymorphism, Genetic; Population Dynamics; Species Specificity
TL;DR:
In this hypothesis, divergent haplotypes that were adapted to different geographical and ecological environments migrated along with humans during the development of domesticated varieties would be enriched for loci that contribute to the enormous range of phenotypic variation observed among domesticated breeds.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Dynamic genetic interactions determine odor-guided behavior in Drosophila melanogaster
GENETICS, 174(3), 1349–1363.
MeSH headings : Animals; Behavior, Animal; DNA Transposable Elements / genetics; Drosophila melanogaster / genetics; Drosophila melanogaster / physiology; Epistasis, Genetic; Genes, Insect; Mutagenesis, Insertional; Mutation; Odorants; Smell / genetics; Smell / physiology
TL;DR:
The results show that the manifestation of epistatic networks dynamically changes with alterations in the environment, and surprisingly, epistatic interactions shifted with changes in the concentration of the olfactory stimulus.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Divergent selection on flowering time contributes to local adaptation in Mimulus guttatus populations
EVOLUTION, 60(12), 2466–2477.
author keywords: divergent natural selection; ecological speciation; flowering time; life-history divergence; local adaptation
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Logarithmic gap costs decrease alignment accuracy
BMC Bioinformatics, 7.
Source: NC State University Libraries
Added: August 6, 2018
Citation Index includes data from a number of different sources. If you have questions about the sources of data in the Citation Index or need a set of data which is free to re-distribute, please contact us.
Certain data included herein are derived from the Web of Science© and InCites© (2024) of Clarivate Analytics. All rights reserved. You may not copy or re-distribute this material in whole or in part without the prior written consent of Clarivate Analytics.
