Works Published in 2007

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Displaying works 101 - 120 of 151 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2007 conference paper

On exact and approximate interpolation of sparse rational functions

ISSAC 2007: International Symposium for Symbolic and Algebraic Computation: Proceedings.

By: E. Kaltofen n & Z. Yang n

TL;DR: Five new algorithms for sparse rational function interpolation algorithm in the hybrid symbolic-numeric setting when the black box for the function returns real and complex values with noise are presented and analyzed. (via Semantic Scholar)
Source: NC State University Libraries
Added: August 6, 2018

2007 journal article

Increasing plasma membrane phosphatidylinositol(4,5)bisphosphate biosynthesis increases phosphoinositide metabolism in Nicotiana tabacum

PLANT CELL, 19(5), 1603–1616.

By: Y. Im n, I. Perera n, I. Brglez n, A. Davis n, J. Stevenson-Paulik*, B. Phillippy n, E. Johannes n, N. Allen n, W. Boss n

MeSH headings : Basal Metabolism; Calcium / metabolism; Cell Membrane / enzymology; Cell Membrane / metabolism; Cell Respiration; Green Fluorescent Proteins / metabolism; Humans; Inositol 1,4,5-Trisphosphate / metabolism; Lipid Metabolism; Phosphatidylinositol 4,5-Diphosphate / biosynthesis; Plant Proteins / metabolism; Plants, Genetically Modified; Protein Transport; Recombinant Fusion Proteins / metabolism; Subcellular Fractions / metabolism; Tobacco / cytology; Tobacco / enzymology; Tobacco / genetics; Tobacco / metabolism; Tritium
TL;DR: It is demonstrated that PIPK is flux limiting and that this high rate of PI metabolism increased the energy demands in transgenic tobacco cells. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2007 review

Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice(1[W][OA])

[Review of ]. Plant Physiology, 144(4), 1697–1714.

Source: NC State University Libraries
Added: August 6, 2018

2007 journal article

Direct synthesis of magnesium porphine via 1-formyldipyrromethane

JOURNAL OF ORGANIC CHEMISTRY, 72(13), 5008–5011.

By: D. Dogutan n, M. Ptaszek n & J. Lindsey n

MeSH headings : Magnesium / chemistry; Metalloporphyrins / chemical synthesis; Metalloporphyrins / chemistry; Methane / analogs & derivatives; Methane / chemistry; Molecular Structure; Palladium / chemistry; Porphyrins / chemical synthesis; Porphyrins / chemistry; Pyrroles / chemistry; Zinc / chemistry
TL;DR: The reaction of 1-formyldipyrromethane in toluene at 115 degrees C containing DBU and MgBr2 in the presence of air affords the magnesium chelate Mg(II) porphine in 30-40% yield. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

Characterization of a novel bile-inducible operon encoding a two-component regulatory system in Lactobacillus acidophilus

JOURNAL OF BACTERIOLOGY, 189(13), 4624–4634.

MeSH headings : Bacterial Proteins / genetics; Base Sequence; Bile Acids and Salts / pharmacology; Gene Expression Regulation, Bacterial / drug effects; Gene Order; Genes, Bacterial / genetics; Lactobacillus acidophilus / drug effects; Lactobacillus acidophilus / genetics; Models, Genetic; Molecular Sequence Data; Mutagenesis, Site-Directed; Mutation; Oligonucleotide Array Sequence Analysis; Reverse Transcriptase Polymerase Chain Reaction; Transcription, Genetic / drug effects
TL;DR: Functional analysis of the effects of bile on the global transcriptional profile of lactobacillus acidophilus NCFM showed that the operon encoded proteins involved in both bile tolerance and bile sensitivity, indicating that the 2CRS plays a role in bileolerance and that theOperon it resides in is negatively controlled by the RR. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Candidate genes affecting Drosophila life span identified by integrating microarray gene expression analysis and QTL mapping

MECHANISMS OF AGEING AND DEVELOPMENT, 128(3), 237–249.

author keywords: life span; microarray gene expression; QTL; Drosophila aging
MeSH headings : Aging / genetics; Aging / physiology; Animals; Biomarkers; Chromosome Mapping; Cytochrome P-450 Enzyme System / genetics; Drosophila / genetics; Drosophila / physiology; Energy Metabolism / genetics; Gene Expression Regulation / physiology; Intercellular Signaling Peptides and Proteins / genetics; Longevity / genetics; Oligonucleotide Array Sequence Analysis; Oxidoreductases / genetics; Quantitative Trait Loci / genetics; Signal Transduction / genetics; Signal Transduction / physiology; Transcription, Genetic; Ubiquitin / genetics
TL;DR: This study investigated gene expression changes between two strains of Drosophila for which quantitative trait loci affecting life span were identified previously, and identified 49 candidate genes and four pathways that could potentially be responsible for regulating life span and involved in the process of aging in Drosophile and humans. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2007 article

Arabidopsis phosphatidylinositol phosphate kinase 1 binds F-actin and recruits phosphatidylinositol 4-kinase beta 1 to the actin cytoskeleton (Retracted article. See vol. 284, pg. 16060, 2009)

Davis, A. J., Im, Y. J., Dubin, J. S., Tomer, K. B., & Boss, W. F. (2007, May 11). JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 282, pp. 14121–14131.

By: A. Davis n, Y. Im n, J. Dubin*, K. Tomer* & W. Boss n

MeSH headings : 1-Phosphatidylinositol 4-Kinase / genetics; 1-Phosphatidylinositol 4-Kinase / metabolism; Actins / metabolism; Arabidopsis / enzymology; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cytoskeleton / metabolism; Glutathione Transferase / genetics; Glutathione Transferase / metabolism; Immunoblotting; Mass Spectrometry; Phosphatidylinositol Phosphates; Phosphotransferases (Alcohol Group Acceptor) / genetics; Phosphotransferases (Alcohol Group Acceptor) / metabolism; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Ain't misbehavin? Genotype-environment interactions and the genetics of behavior

TRENDS IN GENETICS, 23(7), 311–314.

By: T. Mackay n & R. Anholt n

MeSH headings : Animals; Behavior, Animal; Crosses, Genetic; Drosophila; Environment; Genetics, Behavioral / methods; Genotype; Mice; Models, Genetic; Phenotype; Species Specificity
TL;DR: The importance of understanding genotype-environment interactions is stressed, together with studies from Drosophila, which show that some behavioral differences between laboratories remain greatly replicable, whereas others are less robust over time. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Use of an insect cell culture growth medium to isolate bacteria from horses with effusive, fibrinous pericarditis: A preliminary study

VETERINARY MICROBIOLOGY, 121(1-2), 177–181.

By: S. Jones*, A. Valenzisi, S. Sontakke*, K. Sprayberry, R. Maggi*, B. Hegarty*, E. Breitschwerdt*

author keywords: insect cell culture medium; mare reproductive loss syndrome; 16S rDNA; DNA sequencing
MeSH headings : Animals; Bacteria / genetics; Bacteria / isolation & purification; Bacterial Infections / microbiology; Bacterial Infections / pathology; Bacterial Infections / veterinary; Culture Media; Culture Techniques / veterinary; Disease Outbreaks / veterinary; Horse Diseases / microbiology; Horse Diseases / pathology; Horses; Insecta / cytology; Insecta / microbiology; Kentucky / epidemiology; Pericardial Effusion / microbiology; Pericardial Effusion / pathology; Pericarditis / microbiology; Pericarditis / pathology; Pericarditis / veterinary; Pilot Projects; Retrospective Studies
TL;DR: Bacterial isolation from equine pericardial fluid samples was attempted using an insect cell culture growth medium (ICCGM), but a similar or novel caterpillar-associated bacteria was not identified; however, use of an ICCGM might enhance isolation of bacteria from equines pericARDial fluid. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

The genetic architecture of shoot branching in Arabidopsis thaliana: A comparative assessment of candidate gene associations vs. quantitative trait locus mapping

GENETICS, 176(2), 1223–1236.

By: I. Ehrenreich n, P. Stafford n & M. Purugganan*

MeSH headings : Arabidopsis / genetics; Arabidopsis Proteins / genetics; Chromosome Mapping; Gene Amplification; Genes, Plant; Genetic Variation; Linkage Disequilibrium; Molecular Sequence Data; Plant Shoots / genetics; Quantitative Trait Loci
TL;DR: The results suggest that epistasis is prevalent in determining branching variation in A. thaliana and may need to be considered in linkage disequilibrium mapping studies of genetically diverse accessions. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

The early developmental gene Semaphorin 5c contributes to olfactory behavior in adult Drosophila

GENETICS, 176(2), 947–956.

By: S. Rollmann n, A. Yamamoto n, T. Goossens*, L. Zwarts*, Z. Callaerts-Vegh, P. Callaerts*, K. Norga*, T. Mackay n, R. Anholt n

MeSH headings : Aging / physiology; Animals; Animals, Genetically Modified; Antibodies, Monoclonal; Avoidance Learning; Behavior, Animal; Benzaldehydes; Cell Adhesion Molecules, Neuronal / immunology; Crosses, Genetic; Drosophila Proteins / genetics; Drosophila melanogaster / genetics; Drosophila melanogaster / growth & development; Drosophila melanogaster / physiology; Gene Expression Regulation, Developmental; Membrane Glycoproteins / genetics; Mutation; Odorants; Semaphorins / genetics; Smell / physiology
TL;DR: The results demonstrate how hypomorphic mutation of an early developmental gene results in genomewide transcriptional consequences and alterations in brain structure accompanied by profound impairment of adult behavior. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

The Magnaporthe grisea snodprot1 homolog, MSPI, is required for virulence

FEMS MICROBIOLOGY LETTERS, 273(2), 157–165.

By: J. Jeong n, T. Mitchell n & R. Dean n

author keywords: rice blast; hydrophobin; pathogenicity; rice; infection
MeSH headings : Blotting, Western; Fungal Proteins / chemistry; Fungal Proteins / genetics; Fungal Proteins / physiology; Gene Deletion; Hordeum / microbiology; Magnaporthe / genetics; Magnaporthe / metabolism; Magnaporthe / pathogenicity; Molecular Sequence Data; Mutation; Recombinant Fusion Proteins / physiology; Sequence Alignment; Sequence Analysis, Protein; Virulence / genetics; Virulence Factors / chemistry; Virulence Factors / genetics; Virulence Factors / physiology
TL;DR: This is the first report to the authors' knowledge that directly implicates a snodprot1 protein as a virulence factor in the rice blast fungus Magnaporthe grisea. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 3: Spectral and structural properties

TETRAHEDRON, 63(18), 3850–3863.

author keywords: chlorin; NMR; absorption spectra; X-ray
TL;DR: The studies described herein report absorption spectra of diverse chlorins, comparative NMR features of chlorins bearing 0-3 meso-aryl substituents, and X-ray structures of the fully unsubstituted chlorin and the oxochlorin. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 2: Derivatization

TETRAHEDRON, 63(18), 3840–3849.

author keywords: chlorin; deuteration; bromination; metalation
TL;DR: The kinetics of deuteration also have been determined for two oxochlorins and a series of chlorins bearing 0, 1, 2, or 3 meso-aryl substituents. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 review

Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 1: Synthesis

[Review of ]. TETRAHEDRON, 63(18), 3826–3839.

author keywords: chlorin; hydroporphyrin; hydrodipyrrin; dipyrromethane
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 article

Regulatory science in forest biotechnology

Sederoff, R. (2007, April). TREE GENETICS & GENOMES, Vol. 3, pp. 71–74.

By: R. Sederoff n

TL;DR: The development of a regulatory framework in many countries, the absence of evidence ofharm in large numbers of field tests, and increasing familiarity has made this level of acceptance possible, and there is an inherent paradox in much of the regulation incurrent practice. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Molecular analysis of the cercosporin biosynthetic gene cluster in Cercospora nicotianae

MOLECULAR MICROBIOLOGY, 64(3), 755–770.

By: H. Chen*, M. Lee*, M. Daub n & K. Chung*

MeSH headings : Ascomycota / genetics; Ascomycota / metabolism; Base Sequence; Blotting, Northern; Chromosome Walking / methods; DNA, Fungal / chemistry; DNA, Fungal / genetics; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Regulation, Fungal; Gene Order; Genes, Fungal; Genetic Complementation Test; Models, Biological; Molecular Sequence Data; Multigene Family; Mutation; Open Reading Frames / genetics; Perylene / analogs & derivatives; Perylene / metabolism; Reverse Transcriptase Polymerase Chain Reaction; Sequence Analysis, DNA; Transcription, Genetic
TL;DR: Ten putative open reading frames flanking the previously characterized CTB1 and CTB3 genes that encode, respectively, the polyketide synthase and a dual methyltransferase/monooxygenase required for cercosporin production are identified. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Mannitol metabolism in the phytopathogenic fungus Alternaria alternata

FUNGAL GENETICS AND BIOLOGY, 44(4), 258–268.

author keywords: mannitol cycle; mannitol dehydrogenase; mannitol 1-phosphate 5-dehydrogenase; polyols; fungi
MeSH headings : Alternaria / enzymology; Alternaria / growth & development; Culture Media; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Deletion; Genes, Fungal; Mannitol / metabolism; Mannitol Dehydrogenases / genetics; Mannitol Dehydrogenases / metabolism; Plant Diseases / microbiology; Substrate Specificity; Sugar Alcohol Dehydrogenases / genetics; Sugar Alcohol Dehydrogenases / metabolism; Tobacco / microbiology
TL;DR: Enzymatic assays demonstrate that mannitol 1-phosphate 5-dehydrogenase and mann Capitol dehydrogenase are essential enzymes inMannitol metabolism in A. alternata, but do not support mannitor metabolism operating as a cycle. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Inactivation of the p16 cyclin-dependent kinase inhibitor in high-grade canine non-Hodgkin's T-Cell lymphoma

VETERINARY PATHOLOGY, 44(4), 467–478.

By: S. Fosmire*, R. Thomas n, C. Jubala*, J. Wojcieszyn, V. Valli*, D. Getzy*, T. Smith*, L. Gardner* ...

author keywords: canines; cell cycle; non-Hodgkin's lymphoma; tumor suppressor genes
MeSH headings : Animals; Cyclin-Dependent Kinase Inhibitor p16 / genetics; Cyclin-Dependent Kinase Inhibitor p16 / metabolism; Dog Diseases / metabolism; Dogs; Female; Gene Expression Regulation, Neoplastic; Gene Silencing; Lymphoma, B-Cell / metabolism; Lymphoma, B-Cell / veterinary; Lymphoma, T-Cell / metabolism; Lymphoma, T-Cell / veterinary; Male; Retinoblastoma Protein / genetics; Retinoblastoma Protein / metabolism
TL;DR: The data show that p16 deletion or inactivation occurs almost exclusively in high-grade T-cell NHL; however, alternative pathways can generate functional phenotypes of Rb deficiency in low-grade Hodgkin's lymphoma and inHigh-grade B- cell NHL. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Identification of the tobacco blue mold pathogen, Peronospora tabacina, by polymerase chain reaction

PLANT DISEASE, 91(6), 685–691.

By: J. Ristaino n, A. Johnson n, M. Blanco-Meneses n & B. Liu n

Contributors: J. Ristaino n, A. Johnson n, M. Blanco-Meneses n & B. Liu n

author keywords: oomycetes
TL;DR: A specific PCR primer, called PTAB, was developed and used with ITS4 to amplify a 764-bp region of DNA that was diagnostic for P. tabacina on tobacco and was useful for detection of the pathogen in fresh, air-dried, and cured tobacco leaves. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

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