Works Published in 2007

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Displaying works 41 - 60 of 151 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2007 journal article

Improved protocols for functional analysis in the pathogenic fungus Aspergillus flavus

BMC MICROBIOLOGY, 7.

By: Z. He n, M. Price n, G. OBrian n, D. Georgianna n & G. Payne n

MeSH headings : Antifungal Agents / pharmacology; Aspergillus flavus / genetics; Blotting, Southern; Drug Resistance, Fungal / genetics; Genes, Fungal; Genetic Complementation Test; Mutagenesis; Mutagenesis, Insertional; Orotic Acid / analogs & derivatives; Orotic Acid / metabolism; Phleomycins / pharmacology; Polymerase Chain Reaction / methods; Protoplasts; Spores, Fungal / genetics; Transformation, Genetic; Uracil / biosynthesis
TL;DR: The phleomycin resistance as a new positive selectable marker for genetic transformation of A. flavus allows strains to be transformed without having to generate an auxotrophic mutation, which is time consuming and may result in undesirable mutations. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Identification of bacteria from clinical samples using Bartonella alpha-Proteobacteria growth medium

JOURNAL OF MICROBIOLOGICAL METHODS, 71(2), 147–155.

By: M. Cadenas n, R. Maggi n, P. Diniz n, K. Breitschwerdt n, S. Sontakke* & E. Breithschwerdt n

author keywords: co-infection; fastidious bacteria; insect growth medium
MeSH headings : Animals; Bacteria / classification; Bacteria / growth & development; Bacteria / isolation & purification; Bacterial Infections / microbiology; Bacteriological Techniques / methods; Base Sequence; Culture Media / chemistry; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; DNA, Bacterial / isolation & purification; DNA, Ribosomal / chemistry; DNA, Ribosomal / genetics; DNA, Ribosomal / isolation & purification; Humans; Molecular Sequence Data; Phylogeny; Polymerase Chain Reaction; RNA, Ribosomal, 16S / genetics; Sequence Analysis, DNA; Sequence Homology, Nucleic Acid
TL;DR: Despite the phylogenetic limitations of using partial 16S rRNA gene sequencing for species and strain identification, the investigational methodology described in this study may provide a complementary approach for the isolation and identification of bacteria from patient samples. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

Haplotype-based association analysis via variance-components score test

AMERICAN JOURNAL OF HUMAN GENETICS, 81(5), 927–938.

By: J. Tzeng n & D. Zhang n

MeSH headings : Amyotrophic Lateral Sclerosis / genetics; Computer Simulation; Databases, Genetic; Genetic Predisposition to Disease; Haplotypes; Humans; Likelihood Functions; Models, Genetic; Polymorphism, Single Nucleotide / genetics; Quantitative Trait, Heritable
TL;DR: The broad coverage and the fast and easy implementation of this method make the VC strategy an effective tool for haplotype analysis, even in modern genomewide association studies. (via Semantic Scholar)
UN Sustainable Development Goal Categories
16. Peace, Justice and Strong Institutions (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Diversity and divergence patterns in regulatory genes suggest differential gene flow in recently derived species of the Hawaiian silversword alliance adaptive radiation (Asteraceae)

MOLECULAR ECOLOGY, 16(19), 3995–4013.

By: A. Lawton-Rauh*, R. Robichaux* & M. Purugganan n

author keywords: adaptive radiation; allele-sharing; gene flow; Hawaiian silversword alliance; regulatory gene evolution; speciation
MeSH headings : Adaptation, Biological; Asteraceae / anatomy & histology; Asteraceae / genetics; Base Sequence; Gene Flow; Genes, Regulator; Genetic Speciation; Haplotypes; Hawaii; Molecular Sequence Data; Sequence Alignment; Sequence Analysis, DNA; Species Specificity
TL;DR: The results suggest that adaptively radiating species can exhibit contrasting allele migration rates among loci such that allele movement at specific loci may supersede genetic divergence caused by drift and that lineage divergence during adaptive radiation can be associated with population expansion. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2007 review

Design and synthesis of manganese porphyrins with tailored lipophilicity: Investigation of redox properties and superoxide dismutase activity

[Review of ]. BIOORGANIC & MEDICINAL CHEMISTRY, 15(22), 7066–7086.

author keywords: porphyrin; porphodimethene; manganese; lipophilic; amphipathic; cyclic voltammetry; superoxide dismutase
MeSH headings : Catalysis; Cytochromes c / chemistry; Drug Design; Electrochemistry; Electron Transport; Enzyme Activation / drug effects; Lipid Bilayers / chemistry; Manganese / chemistry; Metalloporphyrins / chemical synthesis; Metalloporphyrins / chemistry; Molecular Structure; Oxidation-Reduction; Solubility; Stereoisomerism; Structure-Activity Relationship; Superoxide Dismutase / chemistry; Superoxides / chemistry
TL;DR: Thirteen new manganese porphyrins and two porphodimethenes bearing one to three different substituents at the meso positions in a variety of architectures have been synthesized, and the superoxide dismutase activity of the compounds has been examined. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

Canine bartonellosis: serological and molecular prevalence in Brazil and evidence of co-infection with Bartonella henselae and Bartonella vinsonii subsp berkhoffii

VETERINARY RESEARCH, 38(5), 697–710.

By: P. Vissotto De Paiva Diniz n, R. Maggi n, D. Schwartz*, M. Cadenas n, J. Bradley n, B. Hegarty n, E. Breitschwerdt n

author keywords: dogs; Bartonella infections; heart disease; culture; Brazil
MeSH headings : Angiomatosis, Bacillary / epidemiology; Angiomatosis, Bacillary / veterinary; Animals; Antibodies, Bacterial / blood; Bartonella / immunology; Bartonella Infections / epidemiology; Bartonella Infections / veterinary; Bartonella henselae / immunology; Brazil / epidemiology; DNA, Bacterial / analysis; Dog Diseases / epidemiology; Dogs; Female; Gene Amplification; Male; Prospective Studies; Seroepidemiologic Studies
TL;DR: It is concluded that dogs in this study population were infrequently exposed to or infected with a Bartonella species, genetically similar to strains isolated from septicemic cats, dogs, coyotes and human beings from other parts of the world. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

Analysis of a binary composite endpoint with missing data in components

STATISTICS IN MEDICINE, 26(26), 4703–4718.

By: H. Quan*, D. Zhang n, J. Zhang* & L. Devlamynck*

author keywords: EM algorithm; event rate; missing at random; maximum likelihood estimate
MeSH headings : Algorithms; Clinical Trials as Topic; Data Interpretation, Statistical; Endpoint Determination / statistics & numerical data; Humans; Leg; Likelihood Functions; Orthopedics; United States; Venous Thromboembolism / prevention & control
TL;DR: The main idea is to first derive the probabilities of all possible study outcomes based on the appropriate model and then to construct the overall rate for the composite endpoint. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Ultrafast stimulated emission and structural dynamics in nickel porphyrins

JOURNAL OF PHYSICAL CHEMISTRY A, 111(46), 11736–11742.

MeSH headings : Electrons; Metalloporphyrins / chemistry; Molecular Structure; Nickel / chemistry; Porphyrins / chemistry; Spectrum Analysis
TL;DR: The dynamics of the excited-state pathways involving the (pi, pi*) and (d, d) states varies with the meso-substituted peripheral groups, which is attributed to the nickel porphyrin macrocycle distortion from a planar configuration. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

Trranscript profiling of a conifer pathosystem: response of Pinus sylvestris root tissues to pathogen (Heterobasidion annosum) invasion

TREE PHYSIOLOGY, 27(10), 1441–1458.

By: A. Adomas*, G. Heller*, G. Li*, A. Olson*, T. Chu*, J. Osborne n, D. Craig n, L. Van Zyl n ...

author keywords: antimicrobial peptide; microarray; peroxidase; phenylopropanoid pathway; pine; plant defence
MeSH headings : Fungi / physiology; Gene Expression Profiling; Gene Expression Regulation, Plant; Oligonucleotide Array Sequence Analysis; Pinus sylvestris / metabolism; Plant Diseases / microbiology; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Roots / metabolism; Plant Roots / microbiology; Plant Roots / ultrastructure; Seedlings
TL;DR: The similarity of the expression profiling pattern observed in this pathosystem to those documented in crop pathology suggests that angiosperms and gymnosperms use similar genetic programs in responding to invasive growth by microbial pathogens. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Infection of cells by Sindbis virus at low temperature

Virology, 362(2), 461–467.

MeSH headings : Animals; Cell Fusion; Cell Line; Cricetinae; Endocytosis; Microscopy, Immunoelectron; Neutral Red / metabolism; Sindbis Virus / physiology; Temperature; Time Factors; Viral Plaque Assay; Virus Internalization
TL;DR: The ability of Sind Bis virus to infect Baby Hamster Kidney cells at temperatures which block endocytosis is examined and it is found that under these conditions Sindbis virus infects cells in a temperature- and time-dependent fashion. (via Semantic Scholar)
Source: NC State University Libraries
Added: August 6, 2018

2007 journal article

High-frequency reversion of geminivirus replication protein mutants during infection

JOURNAL OF VIROLOGY, 81(20), 11005–11015.

By: G. Arguello-Astorga n, J. Ascencio-Ibanez n, M. Dallas n, B. Orozco n & L. Hanley-Bowdoin n

MeSH headings : Arabidopsis / virology; Geminiviridae / genetics; Geminiviridae / physiology; Mosaic Viruses; Mutation, Missense; Plant Diseases / virology; Plant Viruses / genetics; Plant Viruses / physiology; Viral Proteins / genetics; Viral Proteins / metabolism; Viral Proteins / physiology; Virus Replication / genetics
TL;DR: There is strong selection for reversion of the TGMV L148V and CaLCuV L145A mutations but that the nature of the selected revertants is influenced by both the viral background and host components. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

Encapsidation of nanoparticles by Red Clover Necrotic Mosaic Virus

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 129(36), 11111–11117.

By: L. Loo n, R. Guenther n, S. Lommel n & S. Franzen n

MeSH headings : Biocompatible Materials; Capsid / physiology; Capsid Proteins / genetics; Capsid Proteins / metabolism; Cobalt / chemistry; Ferric Compounds / chemistry; Gold / chemistry; Nanoparticles / chemistry; Nanotechnology; Quantum Dots; Tombusviridae / physiology; Virus Assembly
TL;DR: Covalent linkage of the OAS to nanoparticles directs RNA-dependent encapsidation and demonstrates that foreign cargo can be packaged into RCNMV virions. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Effects of substituents on synthetic analogs of chlorophylls. Part 2: Redox properties, optical spectra and electronic structure

PHOTOCHEMISTRY AND PHOTOBIOLOGY, 83(5), 1125–1143.

By: H. Kee*, C. Kirmaier*, G. Tang*, J. Diers*, C. Muthiah n, M. Taniguchi n, J. Laha n, M. Ptaszek n ...

MeSH headings : Chlorophyll / chemistry; Mass Spectrometry / methods; Molecular Structure; Nuclear Magnetic Resonance, Biomolecular; Oxidation-Reduction; Porphyrins / chemistry; Spectrometry, Fluorescence; Spectrum Analysis / methods
TL;DR: Insight is provided into the effects of substituents on the optical absorption, redox and other photophysical properties of the chlorins that form a framework that underpins the rational design of chlorins for applications encompassing photomedicine and solar‐energy conversion. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

Effects of substituents on synthetic analogs of chlorophylls. Part 1: Synthesis, vibrational properties and excited-state decay characteristics

PHOTOCHEMISTRY AND PHOTOBIOLOGY, 83(5), 1110–1124.

By: H. Kee*, C. Kirmaier*, Q. Tang*, J. Diers*, C. Muthiah n, M. Taniguchi n, J. Laha n, M. Ptaszek n ...

TL;DR: The spectral, vibrational and excited‐state decay characteristics are examined for a set of synthetic chlorins and the zinc chlorins with the red‐most fluorescence also have the greatest radiative decay rate constant and are expected to have the fastest nonradiative internal conversion to the ground state. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 journal article

A novel gene from Brugia sp that encodes a cytotoxic fatty acid binding protein allergen recognized by canine monoclonal IgE and serum IgE from infected dogs

JOURNAL OF PARASITOLOGY, 93(6), 1378–1387.

MeSH headings : Allergens / chemistry; Allergens / genetics; Allergens / immunology; Amino Acid Sequence; Animals; Antibodies, Helminth / immunology; Antibodies, Monoclonal / immunology; Antigens, Helminth / chemistry; Antigens, Helminth / genetics; Antigens, Helminth / immunology; B-Lymphocytes / immunology; Base Sequence; Blotting, Western; Brugia / genetics; Brugia / immunology; Brugia pahangi / genetics; Brugia pahangi / immunology; Disease Models, Animal; Dogs; Epitopes / immunology; Fatty Acid-Binding Proteins / chemistry; Fatty Acid-Binding Proteins / genetics; Fatty Acid-Binding Proteins / immunology; Female; Filariasis / immunology; Filariasis / parasitology; Gerbillinae; Glutathione Transferase / genetics; Glutathione Transferase / immunology; Immunoglobulin E / blood; Immunoglobulin E / immunology; Male; Molecular Sequence Data; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / immunology; Sequence Homology
TL;DR: This 35-kDa protein seems to be highly conserved in different stages and species of filarids, and it represents a previously unknown allergen that is possibly involved in the pathogenesis of filarial disease. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2007 journal article

A novel canine lymphoma cell line: A translational and comparative model for lymphoma research

LEUKEMIA RESEARCH, 31(12), 1709–1720.

By: W. Kisseberth*, M. Nadella*, M. Breen n, R. Thomas n, S. Duke n, S. Murahari*, C. Kosarek*, W. Vernau* ...

author keywords: canine lymphoma; cell line; array comparative genomic hybridization; bioluminescent imaging; xenograft
MeSH headings : Animals; Biomedical Research; Cell Line, Tumor; Dogs; Immunophenotyping; Lymphoma / pathology; Mice; Mice, SCID; Neoplasm Transplantation; Transplantation, Heterologous
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Vitamer levels, stress response, enzyme activity, and gene regulation of Arabidopsis lines mutant in the pyridoxine/pyridoxamine 5 '-phosphate oxidase (PDX3) and the pyridoxal kinase (SOS4) genes involved in the vitamin B-6 salvage pathway

PLANT PHYSIOLOGY, 145(3), 985–996.

By: E. Gonzalez n, D. Danehower n & M. Daub n

MeSH headings : Arabidopsis / drug effects; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Carbon-Nitrogen Lyases; Chromatography, High Pressure Liquid; Cloning, Molecular; Cold Temperature; DNA, Bacterial / genetics; DNA, Plant / genetics; Gene Expression Regulation, Plant; Light; Mannitol / pharmacology; Molecular Structure; Mutagenesis, Insertional; Mutation; Nitrogenous Group Transferases / metabolism; Phenotype; Pyridoxal Kinase / genetics; Pyridoxal Kinase / metabolism; Pyridoxaminephosphate Oxidase / genetics; Pyridoxaminephosphate Oxidase / metabolism; Sodium Chloride / pharmacology; Sucrose / pharmacology; Time Factors; Vitamin B 6 / chemistry; Vitamin B 6 / metabolism; Water
TL;DR: The phenotype, stress responses, vitamer levels, and regulation of the vitamin B6 pathway genes in Arabidopsis (Arabidopsis thaliana) plants mutant in PDX3 and SOS4 are determined. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

The role of epistasis in the manifestation of heterosis: A systems-oriented approach

GENETICS, 177(3), 1815–1825.

By: A. Melchinger*, H. Utz*, H. Piepho, Z. Zeng n & C. Schoen

MeSH headings : Animals; Breeding; Chromosome Mapping; Epistasis, Genetic; Genes, Dominant; Genetic Markers; Hybrid Vigor; Mathematics; Models, Genetic; Quantitative Trait Loci; Systems Biology
TL;DR: A new type of heterotic effect is defined denoted as augmented dominance effect di* that comprises the dominance effect at each QTL minus half the sum of additive × additive interactions with all other QTL. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Surveillance for Zoonotic Vector-Borne Infections Using Sick Dogs from Southeastern Brazil

Vector-Borne and Zoonotic Diseases, 7(4), 689–698.

By: P. de Paiva Diniz n, D. Schwartz*, H. de Morais* & E. Breitschwerdt n

MeSH headings : Animals; Antibodies, Bacterial / blood; Antibodies, Protozoan / blood; Bartonella / isolation & purification; Bartonella / physiology; Bartonella Infections / blood; Bartonella Infections / epidemiology; Brazil / epidemiology; DNA, Bacterial / blood; Dog Diseases / blood; Dog Diseases / epidemiology; Dog Diseases / microbiology; Dog Diseases / parasitology; Dogs; Ehrlichia canis / genetics; Ehrlichia canis / isolation & purification; Ehrlichia canis / physiology; Ehrlichiosis / blood; Ehrlichiosis / epidemiology; Female; Leishmania infantum / isolation & purification; Leishmania infantum / physiology; Leishmaniasis, Visceral / blood; Leishmaniasis, Visceral / epidemiology; Male; Molecular Sequence Data; RNA, Ribosomal, 16S / genetics; Sentinel Surveillance; Sequence Alignment; Zoonoses / epidemiology
TL;DR: Ehrlichia canis may pose a human health hazard and may be undiagnosed in southeastern Brazil, whereas exposure to the other organisms examined in this study is presumably infrequent. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Sources: NC State University Libraries, NC State University Libraries, Crossref
Added: August 6, 2018

2007 journal article

Is Alba an RNase P subunit?

RNA BIOLOGY, 4(3), 169–172.

By: J. Ellis*, J. Barnes & J. Brown n

author keywords: ribonuclease P; archaea; rihozyme; Methanothermobacter thermoautotrophicus; Mth1483; Rpp25
MeSH headings : Archaeal Proteins / chemistry; Archaeal Proteins / isolation & purification; Archaeal Proteins / physiology; DNA-Binding Proteins / chemistry; DNA-Binding Proteins / isolation & purification; DNA-Binding Proteins / physiology; Endoribonucleases; Humans; Methanobacteriaceae / enzymology; Protein Subunits / chemistry; Protein Subunits / physiology; RNA, Catalytic; Ribonuclease P / chemistry; Ribonuclease P / isolation & purification; Ribonuclease P / physiology
TL;DR: Using the same biochemical methods used to show that four other proteins homologous to eukaryotic RNase P proteins are bona fideRNase P subunits in Archaea, it is found that there is no evidence that Alba is an RN enzyme P subunit. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

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