Works Published in 2008

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Displaying works 1 - 20 of 27 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2008 journal article

Hemochromatosis Gene Polymorphisms, Mitochondrial Haplogroups, and Peripheral Lipoatrophy during Antiretroviral Therapy

The Journal of Infectious Diseases, 197(6), 858–866.

By: T. Hulgan, P. Tebas, J. Canter, K. Mulligan, D. Haas, M. Dubé, S. Grinspoon, G. Robbins, A. Motsinger, A. Kallianpur

Source: Crossref
Added: October 29, 2021

2008 conference paper

Linkage Analysis in American Staffordshire Terriers with Hereditary Cerebellar Cortical Degeneration

Journal of Veterinary Internal Medicine, 22(3), 723–724.

By: N. Olby, T. Harris, P. Mehta, M. Breen, R. Thomas, R. Myers, D. Nielsen

Event: 26th Annual American College of Veterinary Internal Medicine Forum at San Antonio, TX on June 4-7, 2008

Source: NC State University Libraries
Added: March 19, 2021

2008 journal article

The effect of temperature on Natural Antisense Transcript (NAT) expression in Aspergillus flavus

Current Genetics, 54(5), 241–269.

By: C. Smith*, D. Robertson n, B. Yates*, D. Nielsen n, D. Brown n, R. Dean n, G. Payne n

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
author keywords: Aspergillus flavus; Natural antisense transcripts (NATs); Temperature; Gene expression
MeSH headings : Aspergillus flavus / genetics; Aspergillus flavus / metabolism; Expressed Sequence Tags; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Regulation, Fungal; Genome, Fungal; RNA Precursors / metabolism; RNA, Antisense / metabolism; Temperature; Transcription, Genetic / genetics
Sources: Crossref, ORCID
Added: September 5, 2020

2008 journal article

Critical Assessment of QSAR Models of Environmental Toxicity against Tetrahymena pyriformis: Focusing on Applicability Domain and Overfitting by Variable Selection

Journal of Chemical Information and Modeling, 48(9), 1733–1746.

By: I. Tetko*, I. Sushko*, A. Pandey*, H. Zhu*, A. Tropsha*, E. Papa*, T. Öberg*, R. Todeschini*, D. Fourches*, A. Varnek*

co-author countries: Germany 🇩🇪 United States of America 🇺🇸
MeSH headings : Animals; Computer Simulation; Databases, Factual; Environmental Pollutants / chemistry; Environmental Pollutants / toxicity; Models, Biological; Models, Statistical; Normal Distribution; Predictive Value of Tests; Quantitative Structure-Activity Relationship; Reproducibility of Results; Tetrahymena pyriformis / drug effects; Toxicity Tests / standards
Source: Crossref
Added: August 28, 2020

2008 journal article

Combinatorial QSAR Modeling of Chemical Toxicants Tested against Tetrahymena pyriformis

Journal of Chemical Information and Modeling, 48(4), 766–784.

co-author countries: Italy 🇮🇹 United States of America 🇺🇸
MeSH headings : Animals; Combinatorial Chemistry Techniques; Quantitative Structure-Activity Relationship; Tetrahymena pyriformis / drug effects; Toxicity Tests
Source: Crossref
Added: August 28, 2020

2008 journal article

Genomewide association for schizophrenia in the CATIE study: results of stage 1

Molecular Psychiatry, 13(6), 570–584.

By: P. Sullivan*, D. Lin*, J. Tzeng n, E. van den Oord*, D. Perkins*, T. Stroup*, M. Wagner*, S. Lee* ...

co-author countries: United States of America 🇺🇸
author keywords: schizophrenia; genomewide association; CATIE
MeSH headings : Antipsychotic Agents / therapeutic use; Case-Control Studies; Computational Biology; DNA / genetics; DNA / isolation & purification; Genetic Markers; Genetic Variation; Genome, Human; Genotype; Humans; National Institute of Mental Health (U.S.); Polymorphism, Single Nucleotide; Schizophrenia / drug therapy; Schizophrenia / genetics; United States
Source: Crossref
Added: August 28, 2020

2008 journal article

Estimating Odds Ratios in Genome Scans: An Approximate Conditional Likelihood Approach

The American Journal of Human Genetics, 82(5), 1224.

By: A. Ghosh, F. Zou & F. Wright*

Source: Crossref
Added: August 28, 2020

2008 journal article

Estimating Odds Ratios in Genome Scans: An Approximate Conditional Likelihood Approach

The American Journal of Human Genetics, 82(5), 1064–1074.

co-author countries: United States of America 🇺🇸
MeSH headings : Genome, Human; Haplotypes; Humans; Likelihood Functions; Models, Genetic; Odds Ratio; Software
Source: Crossref
Added: August 28, 2020

2008 journal article

Comment on a Simple and Improved Correction for Population Stratification

The American Journal of Human Genetics, 82(2), 524–526.

co-author countries: United States of America 🇺🇸
MeSH headings : Case-Control Studies; Genetic Markers; Genetics, Population; Genotype; Humans; Polymorphism, Single Nucleotide; Regression Analysis; Research Design
Source: Crossref
Added: August 28, 2020

2008 journal article

262: Molecular signatures of preeclampsia in human term placentas

American Journal of Obstetrics and Gynecology, 199(6), S84.

By: S. Tsai n, N. Hardison n, S. Bischoff n, B. Thames*, A. Jamessd*, A. Motsinger-Reif n, J. Piedrahita n

co-author countries: United States of America 🇺🇸
Source: Crossref
Added: February 24, 2020

2008 journal article

SILIP: A novel stable isotope labeling method for in planta quantitative proteomic analysis

Plant Journal, 56(5), 840–854.

By: J. Schaff n, F. Mbeunkui n, K. Blackburn n, D. Bird n & M. Goshe n

co-author countries: United States of America 🇺🇸

Contributors: J. Schaff n, F. Mbeunkui n, K. Blackburn n, D. Bird n & M. Goshe n

author keywords: plant proteomics; quantitative analysis; mass spectrometry; liquid chromatography; isotope-coded; isotope ratio
MeSH headings : Chromatography, Liquid; Isotope Labeling / methods; Solanum lycopersicum / metabolism; Nitrogen / metabolism; Nitrogen Isotopes / metabolism; Phenotype; Plant Proteins / metabolism; Proteomics / methods; Soil; Tandem Mass Spectrometry
Source: ORCID
Added: January 30, 2020

2008 journal article

Genetic basis for adverse events after smallpox vaccination (Journal of Infectious Diseases (2008) 198, (16-22))

Journal of Infectious Diseases, 198(5).

By: D. Reif, B. McKinney & A. Motsinger

Contributors: D. Reif, B. McKinney & A. Motsinger

Source: ORCID
Added: May 14, 2019

2008 journal article

Genetic Basis for Adverse Events after Smallpox Vaccination

The Journal of Infectious Diseases, 198(1), 16–22.

By: D. Reif*, B. McKinney*, A. Motsinger*, S. Chanock*, K. Edwards*, M. Rock*, J. Moore, J. Crowe, Jr.

co-author countries: United States of America 🇺🇸

Contributors: D. Reif*, B. McKinney*, A. Motsinger*, S. Chanock*, K. Edwards*, M. Rock*, J. Moore, J. Crowe Jr.

MeSH headings : Adult; Female; Genetic Predisposition to Disease; Genotype; Humans; Interferon Regulatory Factor-1 / genetics; Interleukin-4 / genetics; Male; Methylenetetrahydrofolate Reductase (NADPH2) / genetics; Polymorphism, Single Nucleotide; Smallpox Vaccine / adverse effects; Vaccination / adverse effects
Sources: Crossref, ORCID
Added: May 14, 2019

2008 conference paper

A balanced accuracy fitness function leads to robust analysis using grammatical evolution neural networks in the case of class imbalance

Proceedings of the 10th annual conference on Genetic and evolutionary computation - GECCO '08, 353–354.

By: N. Hardison n, T. Fanelli*, S. Dudek*, D. Reif*, M. Ritchie* & A. Motsinger-Reif n

co-author countries: United States of America 🇺🇸

Contributors: N. Hardison n, D. Reif*, T. Fanelli*, M. Ritchie*, S. Dudek* & A. Motsinger-Reif n

Source: ORCID
Added: May 14, 2019

2008 journal article

A Comparison of Analytical Methods for Genetic Association Studies

GENETIC EPIDEMIOLOGY, 32(8), 767–778.

By: A. Motsinger-Reif n, D. Reif*, T. Fanelli* & M. Ritchie*

co-author countries: United States of America 🇺🇸

Contributors: A. Motsinger-Reif n, D. Reif*, T. Fanelli* & M. Ritchie*

author keywords: genetic association study; epistasis; multifactor dimensionality reduction; grammatical evolution neural networks; focused interaction testing framework
MeSH headings : Data Interpretation, Statistical; Epistasis, Genetic; Genetic Linkage; Genetic Techniques; Genome; Humans; Models, Genetic; Models, Statistical; Models, Theoretical; Neural Networks, Computer; Phenotype; Probability; Regression Analysis; Software
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Basing population genetic inferences and models of molecular evolution upon desired stationary distributions of DNA or protein sequences

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 363(1512), 3931–3939.

co-author countries: United States of America 🇺🇸
author keywords: variable-length Markov model; profile hidden Markov model; insertion-deletion model; scaled selection coefficient; fitness; Pfam
MeSH headings : Computer Simulation; DNA / genetics; Evolution, Molecular; Genetics, Population; INDEL Mutation / genetics; Markov Chains; Models, Genetic; Population Density; Proteins / genetics; Selection, Genetic
Source: Web Of Science
Added: August 6, 2018

2008 journal article

A sequence-anchored genetic linkage map for the moss, Physcomitrella patens

Plant Journal, 56(5), 840–854.

By: J. Schaff, F. Mbeunkui, K. Blackburn, D. Bird & M. Goshe

Source: NC State University Libraries
Added: August 6, 2018

2008 journal article

Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105(39), 14802–14807.

By: C. Opperman n, D. Bird n, V. Williamson*, D. Rokhsar*, M. Burke n, J. Cohn n, J. Cromer n, S. Diener n ...

co-author countries: United States of America 🇺🇸

Contributors: C. Opperman n, D. Bird n, V. Williamson*, D. Rokhsar*, M. Burke n, J. Cohn n, J. Cromer n, S. Diener n ...

author keywords: compaction; dauer; development; horizontal gene transfer; gene
MeSH headings : Animals; Base Sequence; Caenorhabditis elegans / genetics; Chromosome Mapping; Evolution, Molecular; Gene Duplication; Gene Transfer, Horizontal; Genome, Helminth; Host-Parasite Interactions / genetics; Molecular Sequence Data; Multigene Family; Operon; Phylogeny; Plants / parasitology; Synteny; Tylenchoidea / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Selection shapes malaria genomes and drives divergence between pathogens infecting hominids versus rodents

BMC Evolutionary Biology, 8.

Source: NC State University Libraries
Added: August 6, 2018

2008 journal article

Does strong linkage disequilibrium guarantee redundant association results?

Genetic Epidemiology, 32(6), 546–552.

co-author countries: United States of America 🇺🇸
author keywords: linkage disequilibrium; association mapping; negative correlation; case control; transmission disequilibrium
MeSH headings : Computer Simulation; Gene Frequency; Genetic Markers; Genome, Human; Haplotypes; Humans; Linkage Disequilibrium; Models, Genetic; Models, Statistical; Phenotype; Polymorphism, Single Nucleotide; Quantitative Trait, Heritable
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

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