Works Published in 2015
Displaying works 41 - 60 of 86 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2015 article
Persistent Virus-Induced Gene Silencing in Asymptomatic Accessions of Arabidopsis
PLANT FUNCTIONAL GENOMICS: METHODS AND PROTOCOLS, 2ND EDITION, Vol. 1284, pp. 305–322.
co-author countries:
United States of America 🇺🇸
MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / virology; Begomovirus / physiology; Cloning, Molecular / methods; Gene Silencing; Gene Targeting / methods; Genetic Vectors / genetics; Host-Pathogen Interactions / genetics
Source: Web Of Science
Added: August 6, 2018
2015 journal article
Intercontinental comparison of habitat levels of invasion between temperate North America and Europe
ECOLOGY, 96(12), 3363–3373.
co-author countries:
Czechia 🇨🇿 United States of America 🇺🇸
author keywords: alien species; Czech Republic; habitats; level of invasion; North and South Carolina; plant communities; vascular plants
MeSH headings : Climate; Czech Republic; Ecosystem; Introduced Species; North Carolina; Plants / classification; South Carolina
Source: Web Of Science
Added: August 6, 2018
2015 article
Virus-Induced Gene Silencing of Fiber-Related Genes in Cotton
PLANT GENE SILENCING: METHODS AND PROTOCOLS, Vol. 1287, pp. 219–234.
co-author countries:
United States of America 🇺🇸
author keywords: Virus-induced gene silencing; VIGS; Cotton fiber; GFP; Silencing; Semiquantitative RT-PCR
MeSH headings : Agrobacterium / genetics; Agrobacterium / physiology; Agrobacterium / virology; Cotton Fiber; Cotyledon / genetics; Cotyledon / growth & development; Cotyledon / microbiology; Geminiviridae / genetics; Gene Silencing; Gene Transfer Techniques; Genes, Plant; Genetic Vectors / genetics; Gossypium / genetics; Gossypium / growth & development; Gossypium / microbiology; Green Fluorescent Proteins / genetics; Green Fluorescent Proteins / metabolism; Plants, Genetically Modified / growth & development; Plants, Genetically Modified / metabolism; Plants, Genetically Modified / microbiology; Recombinant Proteins / genetics; Recombinant Proteins / metabolism
Source: Web Of Science
Added: August 6, 2018
2015 journal article
Phylogenomics of polyploidy Fothergilla (Hamamelidaceae) by RAD-tag based GBS—Insights into species origin and effects of software pipelines
Journal of Systematics and Evolution, 53(5), 432–447.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
author keywords: Fothergilla; hybridization; illumina sequencing; phylogenomics; RAD-tag-based GBS; polyploidy
onlinelibrary.wiley.com (publisher PDF)
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2015 article
Phylogenomic approaches to deciphering the tree of life
Wen, J., Liu, J., Ge, S., Xiang, Q.-Y., & Zimmer, E. A. (2015, September). JOURNAL OF SYSTEMATICS AND EVOLUTION, Vol. 53, pp. 369–370.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Metabolic Response of Clostridium ljungdahlii to Oxygen Exposure
Applied and Environmental Microbiology, 81(24), 8379–8391.
co-author countries:
United States of America 🇺🇸
Ed(s): R. Parales
MeSH headings : Acetates / metabolism; Aldehyde Oxidoreductases / metabolism; Base Sequence; Biofuels / microbiology; Bioreactors / microbiology; Carbon Dioxide / metabolism; Clostridium / enzymology; Clostridium / growth & development; Clostridium / metabolism; DNA, Bacterial / genetics; Energy Metabolism / physiology; Ethanol / metabolism; Fermentation / physiology; Gene Expression / drug effects; Molecular Sequence Data; Oxidation-Reduction / drug effects; Oxidoreductases / metabolism; Oxygen / metabolism; Oxygen / pharmacology; Reactive Oxygen Species / metabolism; Sequence Alignment; Sequence Analysis, DNA
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2015 journal article
Characterization of Cercospora nicotianae Hypothetical Proteins in Cercosporin Resistance
PLOS ONE, 10(10).
co-author countries:
United States of America 🇺🇸
MeSH headings : Ascomycota / genetics; Ascomycota / metabolism; Drug Resistance, Fungal / drug effects; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Regulation, Fungal / drug effects; Mutation; Neurospora crassa / genetics; Neurospora crassa / metabolism; Perylene / analogs & derivatives; Perylene / pharmacology
Source: Web Of Science
Added: August 6, 2018
2015 journal article
Algal ancestor of land plants was preadapted for symbiosis
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 112(43), 13390–13395.
co-author countries:
Canada 🇨🇦 China 🇨🇳 Germany 🇩🇪 Spain 🇪🇸 France 🇫🇷 United Kingdom of Great Britain and Northern Ireland 🇬🇧 Japan 🇯🇵 United States of America 🇺🇸
Contributors: P. Delaux *, G. Radhakrishnan*, D. Jayaraman*, J. Cheema*, M. Malbreil*, J. Volkening *, H. Sekimoto *, T. Nishiyama *
author keywords: symbiosis; plant evolution; algae; plant-microbe interactions; phylogeny
MeSH headings : Adaptation, Biological / genetics; Adaptation, Biological / physiology; Base Sequence; Biological Evolution; Chlorophyta / genetics; Chlorophyta / physiology; Closterium / genetics; Closterium / growth & development; DNA Primers / genetics; Embryophyta / genetics; Embryophyta / physiology; Fungi / physiology; Hepatophyta / genetics; Hepatophyta / growth & development; Likelihood Functions; Medicago truncatula / microbiology; Models, Genetic; Molecular Sequence Data; Mycorrhizae / physiology; Phylogeny; Plant Proteins / genetics; Plant Roots / microbiology; RNA, Plant / genetics; Reverse Transcriptase Polymerase Chain Reaction; Sequence Analysis, RNA; Spirogyra / genetics; Spirogyra / growth & development; Symbiosis / genetics; Symbiosis / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 conference paper
A stacking-based approach to identify translated upstream open reading frames in Arabidopsis thaliana
Bioinformatics research and applications (isbra 2015), 9096, 138–149.
Source: NC State University Libraries
Added: August 6, 2018
2015 journal article
A Genome-Wide Scenario of Terpene Pathways in Self-pollinated Artemisia annua
MOLECULAR PLANT, 8(11), 1580–1598.
co-author countries:
United States of America 🇺🇸
author keywords: Artemisia annua; artemisinin; terpene; metabolic profiling; pyrosequencing
MeSH headings : Artemisia annua / genetics; Artemisia annua / metabolism; Artemisinins / metabolism; Gas Chromatography-Mass Spectrometry; Gene Expression Profiling; Genes, Plant; Metabolomics; Pollination / genetics; Self-Fertilization / genetics; Terpenes / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Membrane transporters in self resistance of Cercospora nicotianae to the photoactivated toxin cercosporin
Current Genetics, 61(4), 601–620.
co-author countries:
Thailand 🇹🇭 United States of America 🇺🇸
author keywords: Perylenequinone; Photosensitizer resistance; ABC transporter; MFS transporter; Targeted gene disruption; CRG1; CnATR1; CnCFP
MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Antifungal Agents / metabolism; Antifungal Agents / pharmacology; Drug Resistance, Fungal / genetics; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Regulation, Fungal; Gene Targeting; Membrane Transport Proteins / genetics; Membrane Transport Proteins / metabolism; Neurospora crassa / drug effects; Neurospora crassa / genetics; Neurospora crassa / metabolism; Perylene / analogs & derivatives; Perylene / metabolism; Perylene / pharmacology; Photosensitizing Agents / metabolism; Photosensitizing Agents / pharmacology; Phylogeny; Saccharomycetales / classification; Saccharomycetales / drug effects; Saccharomycetales / genetics; Saccharomycetales / metabolism; Singlet Oxygen / metabolism; Uracil / metabolism; Zinc / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2015 journal article
Discovery of a novel amino acid racemase through exploration of natural variation in Arabidopsis thaliana
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 112(37), 11726–11731.
co-author countries:
United States of America 🇺🇸
author keywords: D-amino acid; racemase; genome-wide association; secondary metabolism; natural variation
MeSH headings : Amino Acid Isomerases / genetics; Amino Acid Isomerases / physiology; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Arabidopsis Proteins / physiology; Chromatography, High Pressure Liquid; Chromatography, Liquid; Chromosome Mapping; Gene Expression Regulation, Plant; Genetic Variation; Genome-Wide Association Study; Genomics; Genotype; Isoleucine / analogs & derivatives; Isoleucine / chemistry; Mass Spectrometry; Metabolomics; Mutation; Quantitative Trait Loci; Stereoisomerism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Clustering and Differential Alignment Algorithm: Identification of Early Stage Regulators in the Arabidopsis thaliana Iron Deficiency Response
PLOS ONE, 10(8).
co-author countries:
United States of America 🇺🇸
Contributors: A. Koryachko n, A. Matthiadis n, D. Muhammad n, J. Foret*, S. Brady *, J. Ducoste n , J. Tuck n , T. Long n , C. Williams n
MeSH headings : Algorithms; Arabidopsis / genetics; Arabidopsis / metabolism; Databases, Genetic; Gene Expression Regulation, Plant; Iron Deficiencies; Sequence Alignment; Software; Transcriptome
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Bird and Scarecrow proteins organize tissue formation in Arabidopsis roots
Science, 350(6259), 426–430.
co-author countries:
Germany 🇩🇪 Spain 🇪🇸 France 🇫🇷 Netherlands 🇳🇱 United States of America 🇺🇸
MeSH headings : Arabidopsis / cytology; Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis Proteins / metabolism; Cell Division / genetics; Cell Lineage / genetics; Gene Expression Regulation, Plant; Plant Roots / cytology; Plant Roots / genetics; Plant Roots / growth & development; Transcription Factors / metabolism; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Bacteria species and solution pH effect postharvest quality of cut Zinnia elegans
SCIENTIA HORTICULTURAE, 194, 71–78.
co-author countries:
United States of America 🇺🇸
author keywords: Cut flower; Postharvest; Phytopathogens; Biocontrol bacteria; Zinnia elegans
Source: Web Of Science
Added: August 6, 2018
2015 journal article
A novel gateway-compatible binary vector series (PC-GW) for flexible cloning of multiple genes for genetic transformation of plants
PLASMID, 81, 55–62.
co-author countries:
United States of America 🇺🇸
Contributors: J. Dalal n, R. Yalamanchili n, C. La Hovary n, M. Ji n, M. Rodriguez-Welsh n, D. Aslett n, S. Ganapathy n, A. Grunden n , H. Sederoff n , R. Qu n
author keywords: Gateway; Plant transformation; Agrobacterium; Gene stacking
MeSH headings : Cloning, Molecular / methods; Gene Expression; Gene Order; Genes, Reporter; Genetic Vectors / genetics; Plants, Genetically Modified; Plasmids / genetics; Transformation, Genetic; Transgenes
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica
BMC Genomics, 16(1).
co-author countries:
Sweden 🇸🇪 United States of America 🇺🇸
author keywords: Rhizoctonia solani (AG3 Rhs1AP); Serratia proteamaculans (S4); Serratia plymuthica (AS13); Biological control; Bacterial-fungal interactions; RNA sequencing; Transcriptome; Fungal gene expression
MeSH headings : Antibiosis; Fungal Proteins / genetics; Gene Expression Profiling / methods; Gene Expression Regulation, Fungal; Gene Ontology; RNA, Fungal / analysis; RNA, Messenger / analysis; Rhizoctonia / genetics; Rhizoctonia / physiology; Rhizosphere; Sequence Analysis, RNA / methods; Serratia / physiology; Species Specificity
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2015 journal article
Stomata morphological traits in two different genotypes of Populus nigra L.
IFOREST-BIOGEOSCIENCES AND FORESTRY, 8, 547–551.
author keywords: Giant Stomata; Poplar Clones; Genotypes; Populus; SEM
Source: Web Of Science
Added: August 6, 2018
2015 journal article
Gene-Specific Translation Regulation Mediated by the Hormone-Signaling Molecule EIN2
CELL, 163(3), 684–697.
co-author countries:
Spain 🇪🇸 United States of America 🇺🇸
Contributors: C. Merchante n, J. Brumos n, J. Yun n, Q. Hu n, K. Spencer n, P. Enríquez n, B. Binder *, S. Heber n , A. Stepanova n , J. Alonso n
MeSH headings : 3' Untranslated Regions; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; DNA-Binding Proteins; Ethylenes / metabolism; F-Box Proteins / genetics; Gene Expression Regulation, Plant; Nuclear Proteins / metabolism; Protein Biosynthesis; RNA, Messenger / metabolism; Receptors, Cell Surface / metabolism; Ribosomes / metabolism; Signal Transduction; Transcription Factors / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Defining multiple, distinct, and shared spatiotemporal patterns of DNA replication and endoreduplication from 3D image analysis of developing maize (Zea mays L.) root tip nuclei
PLANT MOLECULAR BIOLOGY, 89(4-5), 339–351.
co-author countries:
United States of America 🇺🇸
author keywords: Cell cycle; DNA synthesis; Grass
MeSH headings : Cell Nucleus / genetics; Cell Nucleus / metabolism; DNA Replication / genetics; DNA Replication Timing / genetics; DNA, Plant / biosynthesis; DNA, Plant / genetics; Endoreduplication / genetics; Genes, Plant; Imaging, Three-Dimensional; Meristem / genetics; Meristem / growth & development; Meristem / metabolism; Models, Biological; S Phase / genetics; Zea mays / genetics; Zea mays / growth & development; Zea mays / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
