Works Published in 2021
Displaying works 41 - 60 of 120 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2021 journal article
A calmodulin-binding transcription factor links calcium signaling to antiviral RNAi defense in plants
CELL HOST & MICROBE, 29(9), 1393-+.
MeSH headings : Argonaute Proteins / genetics; Argonaute Proteins / metabolism; Calcium / metabolism; Calcium Signaling / genetics; Calmodulin / metabolism; Cucumovirus / pathogenicity; Endonucleases / metabolism; Geminiviridae / pathogenicity; MicroRNAs / metabolism; Plant Diseases / prevention & control; Plant Diseases / virology; Plants; Potyviridae / pathogenicity; RNA Interference / physiology; RNA, Small Interfering / genetics; RNA-Dependent RNA Polymerase / metabolism; Ribonuclease III / genetics; Ribonuclease III / metabolism; Tobacco / genetics; Tobacco / virology; Transcription Factors / metabolism
TL;DR:
It is shown that wounding to Nicotiana benthamiana cells during virus intrusion activates RNAi-related gene expression through calcium signaling, linking Ca2+ signaling to RNAi and revealing versatility of host antiviral defense and viral counter-defense.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: October 26, 2021
2021 journal article
Characterizing past fire occurrence in longleaf pine ecosystems with the Mid-Infrared Burn Index and a Random Forest classifier
FOREST ECOLOGY AND MANAGEMENT, 500.
author keywords: Fire modeling; Prescribed fire; Pinus palustris; Pyrodiversity; Rare plant management; Threatened, endangered and at-risk species
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science; OpenAlex)
Source: Web Of Science
Added: October 12, 2021
2021 article
Spatiotemporal Gene Expression Profiling and Network Inference: A Roadmap for Analysis, Visualization, and Key Gene Identification
MODELING TRANSCRIPTIONAL REGULATION, Vol. 2328, pp. 47–65.
author keywords: Gene regulatory network inference; RNA sequencing; Bioinformatics; Network visualization
MeSH headings : Algorithms; Amino Acid Motifs / genetics; Cluster Analysis; Computational Biology / methods; Gene Expression Profiling / methods; Gene Expression Regulation / genetics; Gene Regulatory Networks / genetics; Multigene Family; RNA-Seq / methods; Software; Spatio-Temporal Analysis; Workflow
TL;DR:
This chapter aims to present a workflow feasible and accessible for plant biologists without a bioinformatics or computer science background and chooses TuxNet, a user-friendly graphical user interface that integrates RNA sequencing data analysis with GRN inference, for the purpose of providing a detailed tutorial.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: October 4, 2021
2021 journal article
Uncovering Transcriptional Responses to Fractional Gravity in Arabidopsis Roots
LIFE-BASEL, 11(10).
author keywords: spaceflight; fractional gravity; RNA-seq; Arabidopsis; gene expression; heat shock proteins
TL;DR:
A subset of genes whose expression correlates with changes in fractional g include those encoding transcription factors, defense, and cell wall-related proteins and heat shock proteins, which are likely to be responsive to gravity changes.
(via Semantic Scholar)
www.mdpi.com (publisher PDF)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: September 28, 2021
2021 journal article
Response of canola yields from marginal lands managed with tillage practices
JOURNAL OF AGRICULTURE AND FOOD RESEARCH, 4.
author keywords: Highway rights-of-way; Oil seed; Geoclimatic regions; Under-utilized space; Land management; Bio-energy crop
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: September 27, 2021
2021 article
Molecular and Biochemical Characterization of Two 4-Coumarate: Coa Ligase Genes in Tea Plant (Camellia Sinensis)
Li, M., Guo, L., Wang, Y., Li, Y., Jiang, X., Liu, Y., … Xia, T. (2021, September 21).
TL;DR:
Two 4-coumarate: CoA ligase genes in tea plant involved in phenylpropanoids biosynthesis and response to environmental stresses are reported, indicating the differences of Cs4CL1 and Cs 4CL2 in the phenyl Propanoid metabolism.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Source: ORCID
Added: September 22, 2021
2021 journal article
Limited plasticity in thermally tolerant ectotherm populations: evidence for a trade-off
author keywords: thermal acclimation; phenotypic plasticity; heat tolerance; trade-off hypothesis; climate change; local adaptation
MeSH headings : Acclimatization; Adaptation, Physiological; Climate Change; Ecosystem; Temperature; Thermotolerance
TL;DR:
The results of the first meta-analysis to examine within-species variation in thermal plasticity are reported, indicating strong support for the trade-off hypothesis and imply that populations with the highest thermal tolerance may have limited phenotypic plasticity to adjust to ongoing climate warming.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science; OpenAlex)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: September 8, 2021
2021 journal article
A Role for Inositol Pyrophosphates in the Metabolic Adaptations to Low Phosphate in Arabidopsis
METABOLITES, 11(9).
author keywords: inositol pyrophosphates; phosphate starvation response; phosphate homeostasis; lipid remodeling; AtVIP1; AtVIP2
TL;DR:
Evidence that both local and systemic responses to phosphate limitation are dampened in the vip1/vip2 mutants as compared to wild-type plants is presented, providing insight on the nexus between inositol phosphates and pyrophosphates involved in complex regulatory mechanisms underpinning phosphate homeostasis in plants.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: September 8, 2021
2021 review
An Overview of the Practices and Management Methods for Enhancing Seed Production in Conifer Plantations for Commercial Use
[Review of ]. HORTICULTURAE, 7(8).
author keywords: conifers; flowering; seed production; pollination; phytohormones; tree management; nutrient fertilization
TL;DR:
The review revealed that flowering and seed yields in conifers are affected by a variety of factors, such as pollen, temperature, light, water availability, nutrients, etc., and a number of management techniques, including topping off, pruning, fertilization, hormone treatment, supplementary pollination, etc. has been developed for improving cone yields.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: September 7, 2021
2021 journal article
Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria
LIFE-BASEL, 11(8).
author keywords: tolyporphins; tetrapyrroles; cyanobacteria; biosynthetic gene cluster; Brasilonema; Nostoc; Oculatella
TL;DR:
Phylogenetic analysis based on 16S rRNA and a common component of the BGCs, TolD, points to a close evolutionary history between each strain and their respective tolyporphins BGC, and a collection of candidate cyanobacteria for genetic and biochemical analysis pertaining to these unusual tetrapyrrole macrocycles.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: September 7, 2021
2021 article
Facilitation by isolated trees triggers woody encroachment and a biome shift at the savanna-forest transition
Abreu, R. C. R., Durigan, G., Melo, A. C. G., Pilon, N. A. L., & Hoffmann, W. A. (2021, August 28). JOURNAL OF APPLIED ECOLOGY.
author keywords: assembly rules; Cerrado vegetation; ecological filters; functional traits; nucleation; nurse trees; perches; savanna-forest mosaic
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science; OpenAlex)
Source: Web Of Science
Added: September 7, 2021
2021 article
Local Plants, Not Soils, Are the Primary Source of Foliar Fungal Community Assembly in a C4 Grass
Whitaker, B. K., Giauque, H., Timmerman, C., Birk, N., & Hawkes, C. V. (2021, August 18). MICROBIAL ECOLOGY, Vol. 8.
author keywords: Source-sink dynamics; Microbiome; Dispersal limitation; Turnover; Nestedness; Precipitation gradient
MeSH headings : Biodiversity; Fungi / physiology; Mycobiome; Panicum; Plants / microbiology; Soil
TL;DR:
The results suggest that the source-sink dynamics of foliar fungi are primarily local, that foliar mushrooms spread from plant-to-plant, and that the abiotic environment may affect fungal community sourcing both directly and via changes to host plant communities.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
15. Life on Land
(OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 30, 2021
2021 article
Epigenetic remodeling by DNA glycosylases during rice reproduction
Li, M., Cui, Q., Zhang, X.-Q., & Hsieh, T.-F. (2021, September 6). MOLECULAR PLANT, Vol. 14, pp. 1433–1435.
MeSH headings : Arabidopsis / enzymology; Arabidopsis / genetics; DNA Glycosylases / genetics; DNA Glycosylases / metabolism; DNA Methylation / physiology; DNA, Plant / genetics; DNA, Plant / metabolism; Epigenesis, Genetic; Oryza / enzymology; Oryza / genetics; Plant Development / physiology; Plant Proteins / genetics; Plant Proteins / metabolism
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: August 24, 2021
2021 journal article
Genetic basis of variation in cocaine and methamphetamine consumption in outbred populations of Drosophila melanogaster
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 118(23).
author keywords: extreme QTL genome-wide association mapping; Drosophila Genetic Reference Panel; RNA interference; advanced intercross population
MeSH headings : Animals; Cocaine / pharmacology; Drosophila Proteins / genetics; Drosophila Proteins / metabolism; Drosophila melanogaster; Epistasis, Genetic; Female; Genome-Wide Association Study; Humans; Male; Methamphetamine / pharmacology; Polymorphism, Single Nucleotide; Quantitative Trait Loci; Sex Characteristics
TL;DR:
It is shown that the genetic architecture underlying variation in voluntary cocaine and methamphetamine consumption differs between sexes and is dominated by variants in genes associated with connectivity and function of the nervous system.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 23, 2021
2021 article
PHENOTYPIC PLASTICITY MASKS RANGE-WIDE GENETIC DIFFERENTIATION FOR VEGETATIVE BUT NOT REPRODUCTIVE TRAITS IN A SHORT-LIVED PLANT
Villellas, J., Ehrlen, J., Crone, E. E., Csergo, A. M., Garcia, M. B., Laine, A.-L., … Buckley, Y. M. (2021, August 5). ECOLOGY LETTERS, Vol. 8.
author keywords: biomass; common garden experiment; countergradient variation; fecundity; genotype by environment interaction; intraspecific trait variation; observational datasets; root; shoot ratio; specific leaf area; widespread species
MeSH headings : Adaptation, Physiological; Biomass; Masks; Phenotype; Plantago
TL;DR:
It is suggested that genetic differentiation may be inferred from observational data only for the traits most closely related to fitness.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 23, 2021
2021 journal article
Population diversity of cassava mosaic begomoviruses increases over the course of serial vegetative propagation
JOURNAL OF GENERAL VIROLOGY, 102(7).
author keywords: cassava mosaic begomoviruses; vegetative propagation; viral diversity
MeSH headings : Base Sequence; Begomovirus / genetics; Begomovirus / physiology; Codon; DNA, Intergenic; DNA, Viral / genetics; Evolution, Molecular; Genetic Variation; Genome, Viral; Manihot / growth & development; Manihot / virology; Mutation; Plant Diseases / virology; Polymorphism, Single Nucleotide; Satellite Viruses / genetics; Satellite Viruses / physiology; Sequence Deletion; Temperature; Viral Proteins / genetics
TL;DR:
It is found that vegetative propagation had a significant effect on viral nucleotide diversity, while temperature and a satellite DNA did not have measurable impacts in this study.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 16, 2021
2021 article
Ultra-sensitive isotope probing to quantify activity and substrate assimilation in microbiomes
Kleiner, M., Kouris, A., Jensen, M., Grace, D. A., Liu, Y., Korenek, A., … Strous, M. (2021, March 30). (Vol. 3). Vol. 3.
TL;DR:
This work presents an ultra-sensitive, high-throughput protein-based stable isotope probing approach (Protein-SIP), which cuts cost for labeled substrates by ∼90% as compared to other SIP and Protein-Sip approaches and thus enables isotope labeling experiments on much larger scales and with higher replication.
(via Semantic Scholar)
Source: ORCID
Added: August 9, 2021
2021 article
Highly variable fidelity drives symbiont community composition in an obligate symbiosis
Mankowski, A., Kleiner, M., Erséus, C., Leisch, N., Sato, Y., Volland, J.-M., … Gruber-Vodicka, H. (2021, April 28). (Vol. 4). Vol. 4.
TL;DR:
It is hypothesized that in gutless oligochaetes, selection within host species for locally adapted and temporally stable symbiont communities leads to varying levels of Symbiont fidelity and shuffles the composition of symbionts assemblages across geographic and evolutionary scales.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 9, 2021
2021 article
Fidelity varies in the symbiosis between a gutless marine worm and its microbial consortium
Sato, Y., Wippler, J., Wentrup, C., Ansorge, R., Sadowski, M., Gruber-Vodicka, H., … Kleiner, M. (2021, January 30). (Vol. 1). Vol. 1.
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 9, 2021
2021 article
Evaluation of RNAlater™ as a field-compatible preservation method for metaproteomic analyses of bacteria-animal symbioses
Jensen, M., Wippler, J., & Kleiner, M. (2021, June 17). (Vol. 6). Vol. 6.
TL;DR:
RNAlater™ can serve as a low hazard, easy to transport alternative to flash freezing for field preservation of samples for metaproteomics and is recommended for protein preservation of field-collected samples when targeted for metAProteomcis.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
Source: ORCID
Added: August 9, 2021
Citation Index includes data from a number of different sources. If you have questions about the sources of data in the Citation Index or need a set of data which is free to re-distribute, please contact us.
Certain data included herein are derived from the Web of Science© and InCites© (2024) of Clarivate Analytics. All rights reserved. You may not copy or re-distribute this material in whole or in part without the prior written consent of Clarivate Analytics.
